Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | bipolar disorder | | ISO | SRPK2 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:31043756 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | bipolar disorder | | ISO | SRPK2 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:31043756 | |
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# | Reference Title | Reference Citation |
1. | Serine-Arginine Protein Kinase SRPK2 Modulates the Assembly of the Active Zone Scaffolding Protein CAST1/ERC2. | Arancibia D, etal., Cells. 2019 Oct 29;8(11):1333. doi: 10.3390/cells8111333. |
2. | Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. | Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27. |
3. | Rat ISS GO annotations from MGI mouse gene data--August 2006 | MGD data from the GO Consortium |
4. | GOA pipeline | RGD automated data pipeline |
5. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:9446799 | PMID:9472028 | PMID:12417631 | PMID:12477932 | PMID:18559500 | PMID:19592491 | PMID:19906640 | PMID:20498328 | PMID:22658674 | PMID:22681889 | PMID:26167880 | PMID:28076779 |
Srpk2 (Rattus norvegicus - Norway rat) |
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SRPK2 (Homo sapiens - human) |
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Srpk2 (Mus musculus - house mouse) |
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Srpk2 (Chinchilla lanigera - long-tailed chinchilla) |
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SRPK2 (Pan paniscus - bonobo/pygmy chimpanzee) |
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SRPK2 (Canis lupus familiaris - dog) |
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Srpk2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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SRPK2 (Sus scrofa - pig) |
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SRPK2 (Chlorocebus sabaeus - green monkey) |
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Srpk2 (Heterocephalus glaber - naked mole-rat) |
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Variants in Srpk2
908 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
RH130578 |
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RH129727 |
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BF395851 |
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alimentary part of gastrointestinal system | circulatory system | endocrine system | exocrine system | hemolymphoid system | hepatobiliary system | integumental system | musculoskeletal system | nervous system | renal system | reproductive system | respiratory system | appendage | |
High | |||||||||||||
Medium | 3 | 37 | 36 | 20 | 19 | 20 | 3 | 5 | 74 | 35 | 41 | 11 | 3 |
Low | 6 | 21 | 21 | 21 | 5 | 6 | 5 | ||||||
Below cutoff |
RefSeq Transcripts | NM_001106575 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
XM_006235903 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_008762635 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017592513 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017592514 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_017592515 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039107226 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039107228 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039107229 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039107231 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039107232 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039107233 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_039107234 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285697 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285698 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285699 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285700 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285701 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285702 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285703 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285704 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285705 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
XM_063285706 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AF102149 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
BC161879 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH474020 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ225239 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
FQ234485 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
JAXUCZ010000004 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSRNOT00000063994 ⟹ ENSRNOP00000059855 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000076429 ⟹ ENSRNOP00000068064 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000080811 ⟹ ENSRNOP00000070149 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000106508 ⟹ ENSRNOP00000096635 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | ENSRNOT00000108014 ⟹ ENSRNOP00000080095 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_001106575 ⟹ NP_001100045 | ||||||||||||||||||||||||||||
RefSeq Status: | PROVISIONAL | ||||||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_006235903 ⟹ XP_006235965 | ||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_017592513 ⟹ XP_017448002 | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | XM_039107226 ⟹ XP_038963154 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039107228 ⟹ XP_038963156 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039107229 ⟹ XP_038963157 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039107231 ⟹ XP_038963159 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039107232 ⟹ XP_038963160 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039107233 ⟹ XP_038963161 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_039107234 ⟹ XP_038963162 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | XM_063285697 ⟹ XP_063141767 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063285698 ⟹ XP_063141768 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063285699 ⟹ XP_063141769 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063285700 ⟹ XP_063141770 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063285701 ⟹ XP_063141771 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063285702 ⟹ XP_063141772 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063285703 ⟹ XP_063141773 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063285704 ⟹ XP_063141774 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063285705 ⟹ XP_063141775 | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | XM_063285706 ⟹ XP_063141776 | ||||||||
Type: | CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001100045 | (Get FASTA) | NCBI Sequence Viewer |
XP_006235965 | (Get FASTA) | NCBI Sequence Viewer | |
XP_017448002 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963154 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963156 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963157 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963159 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963160 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963161 | (Get FASTA) | NCBI Sequence Viewer | |
XP_038963162 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141767 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141768 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141769 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141770 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141771 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141772 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141773 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141774 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141775 | (Get FASTA) | NCBI Sequence Viewer | |
XP_063141776 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAI61879 | (Get FASTA) | NCBI Sequence Viewer |
EDL99396 | (Get FASTA) | NCBI Sequence Viewer | |
EDL99397 | (Get FASTA) | NCBI Sequence Viewer | |
EDL99398 | (Get FASTA) | NCBI Sequence Viewer | |
EDL99399 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSRNOP00000059855 | ||
ENSRNOP00000059855.1 | |||
ENSRNOP00000070149.2 | |||
ENSRNOP00000080095 | |||
ENSRNOP00000080095.1 | |||
ENSRNOP00000096635.1 |
RefSeq Acc Id: | NP_001100045 ⟸ NM_001106575 |
- UniProtKB: | B1WBT4 (UniProtKB/TrEMBL), F7FC44 (UniProtKB/TrEMBL), A6K588 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | XP_006235965 ⟸ XM_006235903 |
- Peptide Label: | isoform X4 |
- Sequence: |
RefSeq Acc Id: | XP_017448002 ⟸ XM_017592513 |
- Peptide Label: | isoform X3 |
- UniProtKB: | A0A0G2JX62 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | ENSRNOP00000070149 ⟸ ENSRNOT00000080811 |
RefSeq Acc Id: | ENSRNOP00000059855 ⟸ ENSRNOT00000063994 |
RefSeq Acc Id: | ENSRNOP00000068064 ⟸ ENSRNOT00000076429 |
RefSeq Acc Id: | XP_038963160 ⟸ XM_039107232 |
- Peptide Label: | isoform X8 |
- UniProtKB: | A0A0G2JX62 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963156 ⟸ XM_039107228 |
- Peptide Label: | isoform X2 |
- UniProtKB: | A0A0G2JX62 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963159 ⟸ XM_039107231 |
- Peptide Label: | isoform X8 |
- UniProtKB: | A0A0G2JX62 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963161 ⟸ XM_039107233 |
- Peptide Label: | isoform X9 |
- UniProtKB: | A6K588 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963154 ⟸ XM_039107226 |
- Peptide Label: | isoform X1 |
- UniProtKB: | A0A0G2JX62 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963157 ⟸ XM_039107229 |
- Peptide Label: | isoform X5 |
- UniProtKB: | A6K588 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_038963162 ⟸ XM_039107234 |
- Peptide Label: | isoform X11 |
- UniProtKB: | A0A8I5ZPE5 (UniProtKB/TrEMBL), A0A0G2JX62 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSRNOP00000080095 ⟸ ENSRNOT00000108014 |
RefSeq Acc Id: | ENSRNOP00000096635 ⟸ ENSRNOT00000106508 |
RefSeq Acc Id: | XP_063141769 ⟸ XM_063285699 |
- Peptide Label: | isoform X10 |
- UniProtKB: | A0A8I6GM61 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063141768 ⟸ XM_063285698 |
- Peptide Label: | isoform X7 |
RefSeq Acc Id: | XP_063141771 ⟸ XM_063285701 |
- Peptide Label: | isoform X13 |
RefSeq Acc Id: | XP_063141772 ⟸ XM_063285702 |
- Peptide Label: | isoform X14 |
- UniProtKB: | B1WBT4 (UniProtKB/TrEMBL), F7FC44 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | XP_063141775 ⟸ XM_063285705 |
- Peptide Label: | isoform X17 |
RefSeq Acc Id: | XP_063141767 ⟸ XM_063285697 |
- Peptide Label: | isoform X6 |
RefSeq Acc Id: | XP_063141770 ⟸ XM_063285700 |
- Peptide Label: | isoform X12 |
RefSeq Acc Id: | XP_063141773 ⟸ XM_063285703 |
- Peptide Label: | isoform X15 |
RefSeq Acc Id: | XP_063141774 ⟸ XM_063285704 |
- Peptide Label: | isoform X16 |
RefSeq Acc Id: | XP_063141776 ⟸ XM_063285706 |
- Peptide Label: | isoform X18 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-A0A0G2JX62-F1-model_v2 | AlphaFold | A0A0G2JX62 | 1-712 | view protein structure |
eQTL | View at Phenogen | |
WGCNA | View at Phenogen | |
Tissue/Strain Expression | View at Phenogen |
RGD ID: | 13692800 | ||||||||
Promoter ID: | EPDNEW_R3324 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | Srpk2_1 | ||||||||
Description: | SRSF protein kinase 2 | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | RGD:1305107 | AgrOrtholog |
BioCyc Gene | G2FUF-46010 | BioCyc |
Ensembl Genes | ENSRNOG00000010601 | Ensembl, ENTREZGENE, UniProtKB/TrEMBL |
Ensembl Transcript | ENSRNOT00000063994 | ENTREZGENE |
ENSRNOT00000063994.4 | UniProtKB/TrEMBL | |
ENSRNOT00000080811.2 | UniProtKB/TrEMBL | |
ENSRNOT00000106508.1 | UniProtKB/TrEMBL | |
ENSRNOT00000108014.1 | UniProtKB/TrEMBL | |
Gene3D-CATH | Transferase(Phosphotransferase) domain 1 | UniProtKB/TrEMBL |
IMAGE_CLONE | IMAGE:7125533 | IMAGE-MGC_LOAD |
InterPro | Kinase-like_dom | UniProtKB/TrEMBL |
Prot_kinase_cat_dom | UniProtKB/TrEMBL | |
Protein_kinase_ATP_BS | UniProtKB/TrEMBL | |
Ser/Thr_kinase_AS | UniProtKB/TrEMBL | |
KEGG Report | rno:296753 | UniProtKB/TrEMBL |
MGC_CLONE | MGC:187443 | IMAGE-MGC_LOAD |
NCBI Gene | 296753 | ENTREZGENE |
PANTHER | PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED | UniProtKB/TrEMBL |
SRSF PROTEIN KINASE 2 | UniProtKB/TrEMBL | |
Pfam | Pkinase | UniProtKB/TrEMBL |
PhenoGen | Srpk2 | PhenoGen |
PROSITE | PROTEIN_KINASE_ATP | UniProtKB/TrEMBL |
PROTEIN_KINASE_DOM | UniProtKB/TrEMBL | |
PROTEIN_KINASE_ST | UniProtKB/TrEMBL | |
RatGTEx | ENSRNOG00000010601 | RatGTEx |
SMART | S_TKc | UniProtKB/TrEMBL |
Superfamily-SCOP | Kinase_like | UniProtKB/TrEMBL |
UniProt | A0A0G2JX62 | ENTREZGENE, UniProtKB/TrEMBL |
A0A8I5ZPE5 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A8I6GM61 | ENTREZGENE, UniProtKB/TrEMBL | |
A6K588 | ENTREZGENE, UniProtKB/TrEMBL | |
B1WBT4 | ENTREZGENE, UniProtKB/TrEMBL | |
F7FC44 | ENTREZGENE, UniProtKB/TrEMBL |
Date | Current Symbol | Current Name | Previous Symbol | Previous Name | Description | Reference | Status |
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2011-08-01 | Srpk2 | SRSF protein kinase 2 | Srpk2 | SFRS protein kinase 2 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2011-07-22 | Srpk2 | SFRS protein kinase 2 | Srpk2 | Srsf protein kinase 2 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2011-07-13 | Srpk2 | Srsf protein kinase 2 | Srpk2 | SFRS protein kinase 2 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-10-23 | Srpk2 | SFRS protein kinase 2 | Srpk2 | serine/arginine-rich protein specific kinase 2 | Nomenclature updated to reflect human and mouse nomenclature | 1299863 | APPROVED |
2008-04-30 | Srpk2 | serine/arginine-rich protein specific kinase 2 | Srpk2_predicted | serine/arginine-rich protein specific kinase 2 (predicted) | 'predicted' is removed | 2292626 | APPROVED |
2005-01-12 | Srpk2_predicted | serine/arginine-rich protein specific kinase 2 (predicted) | Symbol and Name status set to approved | 70820 | APPROVED |