Mxd4 (Max dimerization protein 4) - Rat Genome Database

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Gene: Mxd4 (Max dimerization protein 4) Rattus norvegicus
Analyze
Symbol: Mxd4
Name: Max dimerization protein 4
RGD ID: 1305093
Description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to contribute to DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II. Predicted to act upstream of or within negative regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of RNA polymerase II transcription regulator complex. Orthologous to human MXD4 (MAX dimerization protein 4); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC360961
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81480,786,768 - 80,800,790 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1480,786,342 - 80,800,788 (+)EnsemblGRCr8
mRatBN7.21476,562,105 - 76,576,224 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1476,561,774 - 76,576,221 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1481,014,092 - 81,028,122 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01482,254,721 - 82,268,759 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01478,699,972 - 78,714,002 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01481,819,415 - 81,833,456 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1481,819,415 - 81,833,456 (+)Ensemblrn6Rnor6.0
Rnor_5.01482,504,529 - 82,518,778 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41482,253,309 - 82,264,705 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1475,485,821 - 75,497,217 (+)NCBICelera
RGSC_v3.11482,255,491 - 82,266,879 (+)NCBI
Cytogenetic Map14q21NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(1->4)-beta-D-glucan  (ISO)
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-palmitoylglycerol  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
aflatoxin B1  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
buta-1,3-diene  (ISO)
butan-1-ol  (ISO)
butanal  (ISO)
cadmium atom  (EXP)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
chloroprene  (ISO)
cisplatin  (ISO)
clofibrate  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
dexamethasone  (ISO)
diazinon  (ISO)
dibutyl phthalate  (ISO)
diethylstilbestrol  (ISO)
dimethyl sulfoxide  (ISO)
dioxygen  (EXP,ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
Enterolactone  (ISO)
ethanol  (ISO)
ethyl methanesulfonate  (ISO)
fenthion  (ISO)
folic acid  (ISO)
genistein  (ISO)
gentamycin  (EXP)
geraniol  (ISO)
GSK-J4  (ISO)
GW 7647  (EXP)
indometacin  (ISO)
lead diacetate  (ISO)
manganese(II) chloride  (EXP)
methamphetamine  (ISO)
methidathion  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
naled  (ISO)
ozone  (ISO)
palbociclib  (ISO)
paracetamol  (EXP)
paraquat  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (EXP)
potassium chromate  (ISO)
rotenone  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (ISO)
Soman  (EXP)
succimer  (ISO)
sulforaphane  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (EXP)
thiram  (ISO)
titanium dioxide  (ISO)
tremolite asbestos  (ISO)
tributylstannane  (EXP)
triphenyl phosphate  (ISO)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8521822  


Genomics

Comparative Map Data
Mxd4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81480,786,768 - 80,800,790 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1480,786,342 - 80,800,788 (+)EnsemblGRCr8
mRatBN7.21476,562,105 - 76,576,224 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1476,561,774 - 76,576,221 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1481,014,092 - 81,028,122 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01482,254,721 - 82,268,759 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01478,699,972 - 78,714,002 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01481,819,415 - 81,833,456 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1481,819,415 - 81,833,456 (+)Ensemblrn6Rnor6.0
Rnor_5.01482,504,529 - 82,518,778 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41482,253,309 - 82,264,705 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1475,485,821 - 75,497,217 (+)NCBICelera
RGSC_v3.11482,255,491 - 82,266,879 (+)NCBI
Cytogenetic Map14q21NCBI
MXD4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3842,247,432 - 2,262,109 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl42,247,432 - 2,262,115 (-)Ensemblhg38GRCh38
GRCh3742,249,159 - 2,263,836 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3642,218,958 - 2,233,537 (-)NCBIBuild 36Build 36hg18NCBI36
Build 3442,216,390 - 2,230,970NCBI
Celera42,161,509 - 2,176,088 (-)NCBICelera
Cytogenetic Map4p16.3NCBI
HuRef42,190,152 - 2,204,706 (-)NCBIHuRef
CHM1_142,247,665 - 2,262,244 (-)NCBICHM1_1
T2T-CHM13v2.042,246,204 - 2,260,881 (-)NCBIT2T-CHM13v2.0
Mxd4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39534,331,231 - 34,345,076 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl534,331,227 - 34,345,064 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38534,176,580 - 34,187,710 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl534,173,883 - 34,187,720 (-)Ensemblmm10GRCm38
MGSCv37534,519,229 - 34,530,359 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36534,493,437 - 34,504,567 (-)NCBIMGSCv36mm8
MGSCv36532,887,006 - 32,898,136 (-)NCBIMGSCv36mm8
Celera531,647,161 - 31,658,349 (-)NCBICelera
Cytogenetic Map5B2NCBI
cM Map517.84NCBI
Mxd4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555141,345,960 - 1,358,092 (-)Ensembl
ChiLan1.0NW_0049555141,348,602 - 1,358,092 (-)NCBIChiLan1.0ChiLan1.0
MXD4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v232,581,151 - 2,595,884 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan142,517,600 - 2,532,333 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v042,390,409 - 2,405,141 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.142,298,112 - 2,310,442 (-)NCBIPanPan1.1PanPan1.1panPan2
MXD4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1361,927,722 - 61,941,780 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl361,927,816 - 61,938,638 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha364,445,683 - 64,459,744 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0362,403,021 - 62,417,086 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl362,403,118 - 62,414,892 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1361,895,895 - 61,909,954 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0362,099,576 - 62,113,646 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0362,459,495 - 62,473,558 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Mxd4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528567,531,339 - 67,544,510 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647721,235,288 - 21,246,202 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_00493647721,233,026 - 21,246,202 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MXD4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl81,203,172 - 1,216,725 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.181,203,163 - 1,216,807 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.28695,002 - 708,702 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MXD4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12746,502,767 - 46,517,500 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660512,872,601 - 2,887,443 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mxd4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475525,300,712 - 25,313,243 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475525,300,875 - 25,313,128 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
Mxd4
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11177,054,424 - 77,068,362 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Mxd4
36 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:112
Count of miRNA genes:91
Interacting mature miRNAs:96
Transcripts:ENSRNOT00000018515
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143802371083023710Rat
9590294Uminl4Urine mineral level QTL 45.660.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)1459848686104848686Rat
1582236Gluco22Glucose level QTL 223.30.0164blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147764007196755654Rat
2300197Scl59Serum cholesterol level QTL 59blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1477914838104348525Rat
70214Niddm28Non-insulin dependent diabetes mellitus QTL 284.06blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)143900944484009444Rat
70153Bp59Blood pressure QTL 593.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)147297021087582095Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143067446985041098Rat
631523Pia13Pristane induced arthritis QTL 133.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1433424686102238540Rat
1582259Gluco23Glucose level QTL 233.10.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1474255551109089856Rat
1582197Gluco27Glucose level QTL 273.40.0006blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)147764007196755654Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143802371083023710Rat
634328Hc5Hypercalciuria QTL 52.3urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1462398852107398852Rat
1582250Gluco26Glucose level QTL 263.30.0009blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1477640071100078267Rat
2317879Alcrsp27Alcohol response QTL 273.30.63response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1460854936105854936Rat
1641900Alcrsp11Alcohol response QTL 11alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)1474255551109089856Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1411334716100078267Rat
1582255Gluco29Glucose level QTL 293.10.0025blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)147764007196755654Rat
9589034Epfw11Epididymal fat weight QTL 1160.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)1459848686104848686Rat
1582209Gluco20Glucose level QTL 203.80.0005blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)147764007196755654Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143802371083023710Rat
1300136Rf22Renal function QTL 223.9renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)144261625899224555Rat
1549834Scl45Serum cholesterol level QTL 455.8blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)146592028399224555Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143941117087582095Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143802371083023710Rat

Markers in Region
AI059001  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21476,573,221 - 76,573,403 (+)MAPPERmRatBN7.2
Rnor_6.01481,830,454 - 81,830,635NCBIRnor6.0
Rnor_5.01482,515,776 - 82,515,957UniSTSRnor5.0
RGSC_v3.41482,264,348 - 82,264,529UniSTSRGSC3.4
Celera1475,496,860 - 75,497,041UniSTS
Cytogenetic Map14q21UniSTS
BI274201  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81480,796,963 - 80,797,617 (+)Marker Load Pipeline
mRatBN7.21476,572,397 - 76,573,051 (+)MAPPERmRatBN7.2
Rnor_6.01481,829,630 - 81,830,283NCBIRnor6.0
Rnor_5.01482,514,952 - 82,515,605UniSTSRnor5.0
RGSC_v3.41482,263,524 - 82,264,177UniSTSRGSC3.4
Celera1475,496,036 - 75,496,689UniSTS
Cytogenetic Map14q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 164 91 90 59 92 59 6 356 192 11 143 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000018515   ⟹   ENSRNOP00000018515
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1481,819,415 - 81,830,811 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000075863   ⟹   ENSRNOP00000068353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1481,819,459 - 81,830,780 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000076840   ⟹   ENSRNOP00000068275
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1481,819,799 - 81,829,639 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000077060   ⟹   ENSRNOP00000067906
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1476,562,312 - 76,576,221 (+)Ensembl
Rnor_6.0 Ensembl1481,819,469 - 81,833,456 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000093859   ⟹   ENSRNOP00000093856
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1480,786,342 - 80,800,788 (+)Ensembl
mRatBN7.2 Ensembl1476,561,774 - 76,576,221 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000146361   ⟹   ENSRNOP00000108444
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1480,786,801 - 80,798,803 (+)Ensembl
RefSeq Acc Id: NM_001394732   ⟹   NP_001381661
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81480,786,781 - 80,800,790 (+)NCBI
mRatBN7.21476,562,214 - 76,576,224 (+)NCBI
RefSeq Acc Id: XM_017599316   ⟹   XP_017454805
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81480,786,768 - 80,800,790 (+)NCBI
mRatBN7.21476,562,187 - 76,576,224 (+)NCBI
Rnor_6.01481,819,420 - 81,833,456 (+)NCBI
Sequence:
RefSeq Acc Id: XP_017454805   ⟸   XM_017599316
- Peptide Label: isoform X1
- UniProtKB: A6IK39 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000067906   ⟸   ENSRNOT00000077060
Ensembl Acc Id: ENSRNOP00000018515   ⟸   ENSRNOT00000018515
Ensembl Acc Id: ENSRNOP00000068353   ⟸   ENSRNOT00000075863
Ensembl Acc Id: ENSRNOP00000068275   ⟸   ENSRNOT00000076840
Ensembl Acc Id: ENSRNOP00000093856   ⟸   ENSRNOT00000093859
RefSeq Acc Id: NP_001381661   ⟸   NM_001394732
- UniProtKB: A6IK39 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000108444   ⟸   ENSRNOT00000146361
Protein Domains
bHLH

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-A0A096MIW8-F1-model_v2 AlphaFold A0A096MIW8 1-209 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13699413
Promoter ID:EPDNEW_R9928
Type:initiation region
Name:Mxd4_1
Description:Max dimerization protein 4
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01481,819,487 - 81,819,547EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305093 AgrOrtholog
BioCyc Gene G2FUF-15283 BioCyc
Ensembl Genes ENSRNOG00000015033 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000093859.2 UniProtKB/TrEMBL
  ENSRNOT00000146361 ENTREZGENE
  ENSRNOT00000146361.1 UniProtKB/TrEMBL
Gene3D-CATH 4.10.280.10 UniProtKB/TrEMBL
InterPro bHLH_dom UniProtKB/TrEMBL
  HLH_DNA-bd_sf UniProtKB/TrEMBL
NCBI Gene 360961 ENTREZGENE
PANTHER MAX DIMERIZATION PROTEIN 4 UniProtKB/TrEMBL
  MAX DIMERIZATION, MAD UniProtKB/TrEMBL
Pfam HLH UniProtKB/TrEMBL
PhenoGen Mxd4 PhenoGen
PROSITE BHLH UniProtKB/TrEMBL
RatGTEx ENSRNOG00000015033 RatGTEx
SMART HLH UniProtKB/TrEMBL
Superfamily-SCOP SSF47459 UniProtKB/TrEMBL
UniProt A0A8I6AJN6_RAT UniProtKB/TrEMBL
  A0ABK0LVS6_RAT UniProtKB/TrEMBL
  A6IK39 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-04-30 Mxd4  Max dimerization protein 4   Mxd4_predicted  Max dimerization protein 4 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Mxd4_predicted  Max dimerization protein 4 (predicted)      Symbol and Name status set to approved 70820 APPROVED