Pibf1 (progesterone immunomodulatory binding factor 1) - Rat Genome Database

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Gene: Pibf1 (progesterone immunomodulatory binding factor 1) Rattus norvegicus
Analyze
Symbol: Pibf1
Name: progesterone immunomodulatory binding factor 1
RGD ID: 1305077
Description: Predicted to enable identical protein binding activity and interleukin-4 receptor binding activity. Predicted to be involved in several processes, including mitotic sister chromatid segregation; negative regulation of prostaglandin biosynthetic process; and regulation of cytokine production. Predicted to be located in centriolar satellite; extracellular space; and nucleus. Predicted to be active in microtubule organizing center. Human ortholog(s) of this gene implicated in Joubert syndrome 33. Orthologous to human PIBF1 (progesterone immunomodulatory binding factor 1); INTERACTS WITH bisphenol A; diuron; glyphosate.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC306104; progesterone-induced-blocking factor 1; RGD1305077; similar to Progesterone-induced blocking factor 1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81582,258,243 - 82,427,546 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1582,258,468 - 82,427,548 (+)EnsemblGRCr8
mRatBN7.21575,850,389 - 76,019,711 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1575,850,624 - 76,019,712 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1579,835,580 - 80,005,096 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01580,912,198 - 81,081,705 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01577,859,742 - 78,029,260 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01583,494,110 - 83,663,202 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1583,495,377 - 83,663,143 (+)Ensemblrn6Rnor6.0
Rnor_5.01587,005,462 - 87,172,130 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41582,881,953 - 83,056,944 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1575,091,001 - 75,260,927 (+)NCBICelera
RGSC_v3.11582,898,831 - 83,072,408 (+)NCBI
Cytogenetic Map15q21NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:3863495   PMID:12516630   PMID:14634107   PMID:16393965   PMID:21224392   PMID:21399614   PMID:23110211   PMID:26167768   PMID:27107012  


Genomics

Comparative Map Data
Pibf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81582,258,243 - 82,427,546 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1582,258,468 - 82,427,548 (+)EnsemblGRCr8
mRatBN7.21575,850,389 - 76,019,711 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1575,850,624 - 76,019,712 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1579,835,580 - 80,005,096 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01580,912,198 - 81,081,705 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01577,859,742 - 78,029,260 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01583,494,110 - 83,663,202 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1583,495,377 - 83,663,143 (+)Ensemblrn6Rnor6.0
Rnor_5.01587,005,462 - 87,172,130 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41582,881,953 - 83,056,944 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1575,091,001 - 75,260,927 (+)NCBICelera
RGSC_v3.11582,898,831 - 83,072,408 (+)NCBI
Cytogenetic Map15q21NCBI
PIBF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381372,782,133 - 73,016,461 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1372,781,641 - 73,017,823 (+)Ensemblhg38GRCh38
GRCh371373,356,271 - 73,590,599 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361372,254,231 - 72,488,593 (+)NCBIBuild 36Build 36hg18NCBI36
Build 341372,254,230 - 72,488,593NCBI
Celera1354,254,692 - 54,489,071 (+)NCBICelera
Cytogenetic Map13q21.33-q22.1NCBI
HuRef1354,053,569 - 54,287,899 (+)NCBIHuRef
CHM1_11373,323,943 - 73,558,232 (+)NCBICHM1_1
T2T-CHM13v2.01372,003,616 - 72,238,006 (+)NCBIT2T-CHM13v2.0
Pibf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391499,336,892 - 99,492,335 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1499,336,860 - 99,491,929 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381499,099,424 - 99,254,899 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1499,099,424 - 99,254,493 (+)Ensemblmm10GRCm38
MGSCv371499,498,652 - 99,653,712 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361497,982,567 - 98,137,627 (+)NCBIMGSCv36mm8
Celera1497,775,191 - 97,930,507 (+)NCBICelera
Cytogenetic Map14E2.2NCBI
cM Map1449.27NCBI
Pibf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540433,714,193 - 33,897,622 (-)Ensembl
ChiLan1.0NW_00495540433,713,903 - 33,897,622 (-)NCBIChiLan1.0ChiLan1.0
PIBF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21474,361,897 - 74,598,598 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11372,953,219 - 73,190,395 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01354,011,239 - 54,247,952 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11372,787,220 - 73,022,473 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1372,788,608 - 73,022,473 (+)EnsemblpanPan2panpan1.1
PIBF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12226,935,390 - 27,133,308 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2226,936,567 - 27,133,308 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha2226,791,190 - 26,988,956 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.02227,266,788 - 27,464,812 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2227,266,852 - 27,464,818 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12226,928,764 - 27,126,561 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02226,968,252 - 27,166,039 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02227,039,625 - 27,237,472 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Pibf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945132,443,686 - 132,665,523 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365117,860,590 - 8,081,525 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365117,860,552 - 8,082,850 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIBF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1145,076,062 - 45,362,887 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11145,076,046 - 45,362,708 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21149,486,085 - 49,506,698 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PIBF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1351,916,787 - 52,153,018 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660468,014,005 - 8,256,818 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pibf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475127,543,702 - 27,759,271 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462475127,543,768 - 27,760,536 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Pibf1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11225,245,975 - 25,413,720 (-)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Pibf1
1022 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:58
Count of miRNA genes:55
Interacting mature miRNAs:57
Transcripts:ENSRNOT00000012239, ENSRNOT00000036350
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300144Rf23Renal function QTL 233.61renal blood flow trait (VT:2000006)absolute change in renal vascular resistance (CMO:0001900)1544806773104695021Rat
1576315Schws6Schwannoma susceptibility QTL 60.0069nervous system integrity trait (VT:0010566)post-insult time of death (CMO:0002005)1560213984105213984Rat
1549844Bss7Bone structure and strength QTL 76.4femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1582194914108192169Rat
61477Aia4Adjuvant induced arthritis QTL 43joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)156244089297773284Rat
2300326Plaw1Placental weight QTL 1150.005placenta mass (VT:0004257)placenta wet weight (CMO:0002088)1574735564106469153Rat
70182BpQTLcluster12Blood pressure QTL cluster 123.53arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)1572716871101425383Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)153185580392671517Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)154367724488677244Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)1525285835104695021Rat
631655Bp126Blood pressure QTL 1264arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1564571127108192169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)1525285835104695021Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151915576287086765Rat
1598828Glom14Glomerulus QTL 142.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)154046315285463152Rat
631516Gluco31Glucose level QTL 317blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1572716871101425383Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)1561710951106710951Rat
1331724Bp223Blood pressure QTL 2233.53715arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1575928947101425383Rat
2317050Aia24Adjuvant induced arthritis QTL 242.06joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1559257087104257087Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)154367724488677244Rat
2313080Bss65Bone structure and strength QTL 653.90.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)1567399137108192169Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)1525285835104695021Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)154367724488677244Rat
2317055Aia10Adjuvant induced arthritis QTL 103.41joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)1582194914108192169Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)154367724488677244Rat

Markers in Region
D15Rat23  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21576,003,569 - 76,003,707 (+)MAPPERmRatBN7.2
Rnor_6.01583,647,062 - 83,647,199NCBIRnor6.0
Rnor_5.01587,155,990 - 87,156,127UniSTSRnor5.0
RGSC_v3.41583,040,937 - 83,041,075RGDRGSC3.4
RGSC_v3.41583,040,938 - 83,041,075UniSTSRGSC3.4
Celera1575,244,181 - 75,244,318UniSTS
RGSC_v3.11583,056,718 - 83,056,855RGD
RH 3.4 Map15521.2UniSTS
RH 3.4 Map15521.2RGD
SHRSP x BN Map1546.4098UniSTS
SHRSP x BN Map1546.4098RGD
Cytogenetic Map15q21UniSTS
BI293372  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21575,911,862 - 75,912,082 (+)MAPPERmRatBN7.2
Rnor_6.01583,555,512 - 83,555,731NCBIRnor6.0
Rnor_5.01587,066,798 - 87,067,017UniSTSRnor5.0
RGSC_v3.41582,943,185 - 82,943,404UniSTSRGSC3.4
Celera1575,152,252 - 75,152,471UniSTS
RH 3.4 Map15517.4UniSTS
Cytogenetic Map15q21UniSTS
BE121430  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21575,987,411 - 75,987,569 (+)MAPPERmRatBN7.2
Rnor_6.01583,630,421 - 83,630,578NCBIRnor6.0
Rnor_5.01587,139,349 - 87,139,506UniSTSRnor5.0
RGSC_v3.41583,024,775 - 83,024,932UniSTSRGSC3.4
Celera1575,228,085 - 75,228,242UniSTS
RH 3.4 Map15518.4UniSTS
Cytogenetic Map15q21UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
16 12 67 165 91 90 59 92 59 6 356 192 11 144 81 92 31 17 17

Sequence


Ensembl Acc Id: ENSRNOT00000036350   ⟹   ENSRNOP00000037643
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1582,258,468 - 82,427,548 (+)Ensembl
mRatBN7.2 Ensembl1575,850,624 - 76,019,712 (+)Ensembl
Rnor_6.0 Ensembl1583,495,377 - 83,663,143 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000126258   ⟹   ENSRNOP00000105686
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1582,258,468 - 82,408,386 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000138380   ⟹   ENSRNOP00000099271
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1582,258,468 - 82,401,425 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000172691   ⟹   ENSRNOP00000111885
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl1582,258,468 - 82,427,548 (+)Ensembl
RefSeq Acc Id: NM_001305419   ⟹   NP_001292348
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,473 - 82,427,546 (+)NCBI
mRatBN7.21575,850,624 - 76,019,711 (+)NCBI
Rnor_6.01583,494,281 - 83,663,202 (+)NCBI
Celera1575,091,001 - 75,260,927 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006252405   ⟹   XP_006252467
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,469 - 82,427,546 (+)NCBI
mRatBN7.21575,850,616 - 76,019,711 (+)NCBI
Rnor_6.01583,494,268 - 83,663,202 (+)NCBI
Rnor_5.01587,005,462 - 87,172,130 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006252406   ⟹   XP_006252468
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,243 - 82,427,546 (+)NCBI
mRatBN7.21575,850,389 - 76,019,711 (+)NCBI
Rnor_6.01583,494,110 - 83,663,202 (+)NCBI
Rnor_5.01587,005,462 - 87,172,130 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063274323   ⟹   XP_063130393
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,441 - 82,427,546 (+)NCBI
RefSeq Acc Id: XM_063274325   ⟹   XP_063130395
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,469 - 82,417,102 (+)NCBI
RefSeq Acc Id: XM_224451   ⟹   XP_224451
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,441 - 82,427,546 (+)NCBI
mRatBN7.21575,850,609 - 76,019,711 (+)NCBI
Rnor_6.01583,494,229 - 83,663,202 (+)NCBI
Rnor_5.01587,005,462 - 87,172,130 (+)NCBI
RGSC_v3.41582,881,953 - 83,056,944 (+)RGD
Sequence:
RefSeq Acc Id: XR_010057824
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,469 - 82,417,002 (+)NCBI
RefSeq Acc Id: XR_010057825
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,469 - 82,373,724 (+)NCBI
RefSeq Acc Id: XR_010057826
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,469 - 82,357,390 (+)NCBI
RefSeq Acc Id: XR_010057827
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,469 - 82,357,390 (+)NCBI
RefSeq Acc Id: XR_010057828
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81582,258,469 - 82,357,390 (+)NCBI
RefSeq Acc Id: XP_224451   ⟸   XM_224451
- Peptide Label: isoform X1
- UniProtKB: D3ZU21 (UniProtKB/TrEMBL),   A6HU58 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252468   ⟸   XM_006252406
- Peptide Label: isoform X1
- UniProtKB: D3ZU21 (UniProtKB/TrEMBL),   A6HU58 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006252467   ⟸   XM_006252405
- Peptide Label: isoform X1
- UniProtKB: D3ZU21 (UniProtKB/TrEMBL),   A6HU58 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001292348   ⟸   NM_001305419
- UniProtKB: D3ZU21 (UniProtKB/TrEMBL),   A6HU58 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000037643   ⟸   ENSRNOT00000036350
RefSeq Acc Id: XP_063130393   ⟸   XM_063274323
- Peptide Label: isoform X2
- UniProtKB: A6HU58 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063130395   ⟸   XM_063274325
- Peptide Label: isoform X3
- UniProtKB: A6HU58 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000105686   ⟸   ENSRNOT00000126258
Ensembl Acc Id: ENSRNOP00000099271   ⟸   ENSRNOT00000138380
Ensembl Acc Id: ENSRNOP00000111885   ⟸   ENSRNOT00000172691

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZU21-F1-model_v2 AlphaFold D3ZU21 1-757 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1305077 AgrOrtholog
BioCyc Gene G2FUF-12786 BioCyc
Ensembl Genes ENSRNOG00000009208 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000036350 ENTREZGENE
  ENSRNOT00000036350.9 UniProtKB/TrEMBL
  ENSRNOT00000126258.1 UniProtKB/TrEMBL
  ENSRNOT00000138380 ENTREZGENE
  ENSRNOT00000138380.1 UniProtKB/TrEMBL
  ENSRNOT00000172691 ENTREZGENE
  ENSRNOT00000172691.1 UniProtKB/TrEMBL
InterPro PIBF1 UniProtKB/TrEMBL
KEGG Report rno:306104 UniProtKB/TrEMBL
NCBI Gene 306104 ENTREZGENE
PANTHER PROGESTERONE-INDUCED-BLOCKING FACTOR 1 UniProtKB/TrEMBL
  PTHR18950 UniProtKB/TrEMBL
PhenoGen Pibf1 PhenoGen
RatGTEx ENSRNOG00000009208 RatGTEx
UniProt A0ABK0L6S6_RAT UniProtKB/TrEMBL
  A0ABK0LLU7_RAT UniProtKB/TrEMBL
  A0ABK0LTZ8_RAT UniProtKB/TrEMBL
  A6HU58 ENTREZGENE, UniProtKB/TrEMBL
  D3ZU21 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2008-03-06 Pibf1  progesterone immunomodulatory binding factor 1  RGD1305077_predicted  similar to Progesterone-induced blocking factor 1 (predicted)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-01-20 RGD1305077_predicted  similar to Progesterone-induced blocking factor 1 (predicted)  LOC306104_predicted    Symbol and Name status set to approved 1331353 APPROVED
2005-01-12 LOC306104_predicted  similar to Progesterone-induced blocking factor 1 (predicted)      Symbol and Name status set to provisional 70820 PROVISIONAL