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Gene: Plk5 (polo-like kinase 5) Rattus norvegicus

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Symbol:

Plk5

Name:

polo-like kinase 5

RGD ID:

1305038

Description:

Predicted to enable ATP binding activity and transferase activity. Predicted to be involved in several processes, including defense response to tumor cell; mitotic spindle organization; and regulation of G1/S transition of mitotic cell cycle. Predicted to be located in nucleolus. Predicted to be active in several cellular components, including kinetochore; microtubule cytoskeleton; and nucleus. Orthologous to human PLK5 (polo like kinase 5 (inactive)); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

inactive serine/threonine-protein kinase PLK5; LOC314627; Plk5p; polo-like kinase 5 pseudogene; RGD1305038; serine/threonine-protein kinase PLK5; similar to Serine/threonine-protein kinase SNK (Serum inducible kinase)

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PLK5 (polo like kinase 5 (inactive))	HGNC	EggNOG, Ensembl, HomoloGene, NCBI, OrthoDB, Panther, Treefam
Mus musculus (house mouse):	Plk5 (polo like kinase 5)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Plk5 (polo like kinase 5 (inactive))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PLK5 (polo like kinase 5 (inactive))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PLK5 (polo like kinase 5 (inactive))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Plk5 (polo like kinase 5 (inactive))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PLK5 (polo like kinase 5 (inactive))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PLK5 (polo like kinase 5 (inactive))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Plk5 (polo like kinase 5 (inactive))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Plk5 (polo like kinase 5 (inactive))	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	UVRAG (UV radiation resistance associated)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Plk5 (polo like kinase 5)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PLK5 (polo like kinase 5 (inactive))	Alliance	DIOPT (Ensembl Compara\|HGNC\|OrthoFinder\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	CDC5	Alliance	DIOPT (OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Saccharomyces cerevisiae (baker's yeast):	CDC5	Alliance	DIOPT (OrthoInspector\|PANTHER\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	plk5	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	9,997,453 - 10,006,959 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	9,997,453 - 10,019,340 (-)	Ensembl				GRCr8
mRatBN7.2	7	9,346,777 - 9,367,923 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	9,346,777 - 9,355,196 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	12,223,648 - 12,232,091 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	14,098,988 - 14,107,431 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	11,966,317 - 11,974,816 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	12,212,910 - 12,234,253 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	12,212,911 - 12,221,330 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	12,382,705 - 12,391,125 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	10,858,118 - 10,866,430 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	7,523,892 - 7,531,997 (-)	NCBI		Celera
RGSC_v3.1	7	10,858,316 - 10,874,502 (-)	NCBI
Cytogenetic Map	7	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

6-propyl-2-thiouracil (EXP)

acetamide (EXP)

acrylamide (EXP)

aflatoxin B1 (EXP)

all-trans-retinoic acid (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

benzo[b]fluoranthene (ISO)

bisphenol A (EXP,ISO)

bisphenol F (ISO)

C60 fullerene (EXP)

cadmium dichloride (ISO)

carbon nanotube (ISO)

chrysene (ISO)

Cuprizon (EXP)

DDE (ISO)

dibenz[a,h]anthracene (ISO)

genistein (ISO)

gentamycin (EXP)

inulin (ISO)

Licochalcone B (ISO)

mono(2-ethylhexyl) phthalate (ISO)

paracetamol (EXP)

perfluorooctane-1-sulfonic acid (ISO)

pirinixic acid (ISO)

sodium arsenite (ISO)

Soman (EXP)

tetraphene (ISO)

thioacetamide (EXP)

titanium dioxide (ISO)

trichloroethene (EXP)

triptonide (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to growth factor stimulus (ISO)

defense response to tumor cell (ISO)

DNA damage response (IBA,ISO)

mitotic spindle organization (IBA)

negative regulation of cell population proliferation (ISO)

positive regulation of neuron projection development (ISO)

regulation of apoptotic process (ISO)

regulation of G1/S transition of mitotic cell cycle (IBA,ISO)

Cellular Component

centrosome (IBA)

cytoplasm (IBA,IEA,ISO)

kinetochore (IBA)

nucleolus (IEA,ISO)

nucleus (IBA)

spindle pole (IBA)

Molecular Function

ATP binding (IEA)

kinase activity (IEA,ISO)

nucleotide binding (IEA)

protein kinase activity (IEA)

protein serine/threonine kinase activity (IEA)

transferase activity (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	GOA pipeline	RGD automated data pipeline
3.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:20100802	PMID:21245385

Genomics

Comparative Map Data

Plk5
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	9,997,453 - 10,006,959 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	9,997,453 - 10,019,340 (-)	Ensembl				GRCr8
mRatBN7.2	7	9,346,777 - 9,367,923 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	9,346,777 - 9,355,196 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	12,223,648 - 12,232,091 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	14,098,988 - 14,107,431 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	11,966,317 - 11,974,816 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	12,212,910 - 12,234,253 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	12,212,911 - 12,221,330 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	12,382,705 - 12,391,125 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	10,858,118 - 10,866,430 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	7,523,892 - 7,531,997 (-)	NCBI		Celera
RGSC_v3.1	7	10,858,316 - 10,874,502 (-)	NCBI
Cytogenetic Map	7	q11	NCBI

PLK5
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	1,524,077 - 1,536,046 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	1,508,023 - 1,536,046 (+)	Ensembl			hg38	GRCh38
GRCh37	19	1,524,076 - 1,536,045 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	1,475,079 - 1,486,455 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	19	1,458,103 - 1,469,377 (+)	NCBI		Celera
Cytogenetic Map	19	p13.3	NCBI
HuRef	19	1,298,745 - 1,309,489 (+)	NCBI		HuRef
CHM1_1	19	1,524,068 - 1,535,220 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	1,494,514 - 1,506,275 (+)	NCBI		T2T-CHM13v2.0

Plk5
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	80,192,293 - 80,201,323 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	80,192,293 - 80,201,323 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	80,356,459 - 80,365,489 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	80,356,459 - 80,365,489 (+)	Ensembl			mm10	GRCm38
MGSCv37	10	79,819,204 - 79,828,234 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	79,759,588 - 79,768,610 (+)	NCBI		MGSCv36	mm8
Celera	10	81,371,338 - 81,380,211 (+)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	39.72	NCBI

Plk5
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955495	6,415,116 - 6,430,377 (-)	Ensembl
ChiLan1.0	NW_004955495	6,415,172 - 6,424,445 (-)	NCBI	ChiLan1.0	ChiLan1.0

PLK5
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	5,876,086 - 5,899,659 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	5,119,343 - 5,130,503 (+)	NCBI		NHGRI_mPanPan1
PanPan1.1	19	1,496,205 - 1,506,201 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	1,497,953 - 1,505,995 (+)	Ensembl			panPan2	panpan1.1

PLK5
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	57,337,808 - 57,343,993 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	57,337,874 - 57,343,945 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	57,129,851 - 57,136,106 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	58,069,085 - 58,075,340 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	58,068,402 - 58,075,313 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	57,125,378 - 57,131,609 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	57,604,652 - 57,610,898 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	57,806,577 - 57,812,829 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Plk5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	216,995,919 - 217,009,690 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936588	814,865 - 839,387 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936588	826,473 - 838,818 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PLK5
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	2	76,948,062 - 76,956,310 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	78,124,259 - 78,132,107 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PLK5
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	1,301,199 - 1,309,349 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666081	7,540,477 - 7,551,132 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Plk5
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624828	7,172,286 - 7,181,564 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Plk5
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	1	154,518,338 - 154,526,122 (-)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Plk5
36 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	204
Count of miRNA genes:	145
Interacting mature miRNAs:	159
Transcripts:	ENSRNOT00000042204
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
61410	Bw19	Body weight QTL 19	6.2	0.001	body mass (VT:0001259)	body weight (CMO:0000012)	7	1669658	46669658	Rat
1300176	Hrtrt10	Heart rate QTL 10	3.19		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	7	1	23748937	Rat
9590102	Sffal5	Serum free fatty acids level QTL 5	8.62	0.001	blood free fatty acid amount (VT:0001553)	plasma free fatty acids level (CMO:0000546)	7	7216097	52216097	Rat
2290372	Gluco33	Glucose level QTL 33	2.71		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	1	31777942	Rat
1300149	Cm6	Cardiac mass QTL 6	4.09		heart mass (VT:0007028)	heart left ventricle weight to body weight ratio (CMO:0000530)	7	1	104117804	Rat
631503	Bp102	Blood pressure QTL 102	1.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	1709527	46709527	Rat
634336	Anxrr17	Anxiety related response QTL 17	3.66		locomotor behavior trait (VT:0001392)	number of entries into a discrete space in an experimental apparatus (CMO:0000960)	7	1509236	116977875	Rat
9590142	Scort5	Serum corticosterone level QTL 5	24.4	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	7	1	32612984	Rat
1582260	Bw72	Body weight QTL 72	3.2	0.0043	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	39960528	Rat
1582261	Bw69	Body weight QTL 69	3.2	0.0048	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	39960528	Rat
1582262	Bw75	Body weight QTL 75	3	0.0038	body mass (VT:0001259)	body weight (CMO:0000012)	7	1	39960528	Rat
10059592	Kidm45	Kidney mass QTL 45	3.95	0.025	kidney mass (VT:0002707)	both kidneys wet weight to body weight ratio (CMO:0000340)	7	9460877	54460877	Rat
2298550	Neuinf6	Neuroinflammation QTL 6	3.3		nervous system integrity trait (VT:0010566)	spinal cord RT1-B protein level (CMO:0002132)	7	1	29716167	Rat
724560	Plsm3	Polydactyly-luxate syndrome (PLS) morphotypes QTL 3		0.0003	tibia length (VT:0004357)	tibia length (CMO:0000450)	7	1	34650782	Rat
7411566	Bw136	Body weight QTL 136	10.4	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	7	1	32612984	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	10	62	156	86	85	54	87	54	6	338	180	11	135	80	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001170557	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437425	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437426	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001437427	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240923	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006240925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765098	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039079005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263417	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263420	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005486602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_355240	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_355241	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC120291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000042204 ⟹ ENSRNOP00000051194

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	9,997,453 - 10,005,872 (-)	Ensembl
mRatBN7.2 Ensembl	7	9,346,777 - 9,355,196 (-)	Ensembl
Rnor_6.0 Ensembl	7	12,212,911 - 12,221,330 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000146724 ⟹ ENSRNOP00000100195

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	9,997,453 - 10,005,872 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000153750 ⟹ ENSRNOP00000101491

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	9,997,453 - 10,019,340 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000158969 ⟹ ENSRNOP00000107666

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	9,997,453 - 10,010,324 (-)	Ensembl

RefSeq Acc Id:

NM_001170557 ⟹ NP_001164028

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,005,872 (-)	NCBI
mRatBN7.2	7	9,346,777 - 9,355,196 (-)	NCBI
Rnor_6.0	7	12,212,911 - 12,221,330 (-)	NCBI
Rnor_5.0	7	12,382,705 - 12,391,125 (-)	NCBI
Celera	7	7,523,892 - 7,531,997 (-)	NCBI

Sequence:

show sequence

TAAGACCCGCTCCTGCTGCTCGCGGGCTCACAGCGGCAGCGCTGCAGGCAGCACTGGCTTGCCC
AGTTCCCGCGCGCGCGCTGCGCACCCAGGCCCACCCCGCGTCGATGGAGCCCCGGTTGAGGCGG
CGGCGAAGCCGCCAGCTAGTGGCCACCTTCCTGCGTGACCCGGGCTCAGGGCGCGTGTACCGGC
GCGGGAAGCTGATCGGCAAGGGCGCCTTCAGCCGCTGCTACAAGCTCACGGACATGTCCACCAG
CGCGGTGTTTGCTCTTAAGGTGGTGCCGAGGGGCGGAGCGGGGCGGCTGCGCCTGCGCGGGAAG
GTGGAGCGTGAGATCGCCCTGCACAGCCGCCTGCACCACCGCAACATCGTGGCCTTCCACGCAC
ACTTTGCTGACCGCGACCACGTGTATATGGTGCTGGAGTACTGTAGCCGCCAGTCCTTGGCTCA
TGTACTGAAAGTGCGGCGGACCCTGACGGAGCCTGAAGTGCGCTACTACTTTCGGGGCCTGGTC
AGTGGCCTCCGCTACCTGCACCAACAACGCATCGTGCACAGGGACCTGAAACCCAGTAATTTCT
TCCTTAACAAGAACATGGAAGTTAAGATAGGTGACCTGGGGCTGGCTGCCCGTGTGGGGCCCGC
TGGCCGCTGCCACAGGGTGCTCTGTGGGACTCCGAACTTCCAGGCTCCTGAAGTGGTGTCCCGA
AATGGACACTCGGCCAAGTCTGACATCTGGGCCCTGGGGTGCATTATGTACACGGTGCTGACGG
GCACGCCCCCCTTCGCTGCCGCACCCTTGTCCGAGATGTACCAAAACATCCGAGACGGTCACTA
CCTTGAGCCCACTCAGCTGTCACCCAGCGCCCGTAGCCTCATTGCACGACTTCTGGCACCGGAC
CCTGATGAGCGGCCCAGCCTGGACCACTTACTGCAAGATGACTTTTTTAGTCAGGGCTTTACCC
CAGAGCGGCTGCCTCCACATTCCTGCCACAGCCCACCCGTGTTTGCCTTCCCCCCGCCACTGGG
CAGGTTGTTCCGGAAGGTGGGCCAACTCCTGCTGACCCAGTGCCGGCCGCCCTGTCCCTTTACC
TCAAAAGAGGCCTCAGGCCCGGGAGAAGAGAGTACAGAACCTGACCACATGGAGGCCAGCAACG
AGGCAAGGGCTCCTCTCTGCACTGAGAGCCGAATCCACCTCCTCACTCTTGGAACCCCTCGGAC
TGACCCGGCCGATGCGAAGGGGACCTTGGCCCTGCAGCTGGAGGTGGCAACCAGAAAACTGTGC
CTCTGCTTGGATGCAGGACCTGTGGCTGGACAGGACCCCCCCGGGGAGCAGCGCTCTGTCCTCT
GGGCTCCCAAGTGGGTGGATTATTCCCTCAAGTATGGCTTCGGTTACCAGCTGTCGGATGGGGG
CAGTGGCGTGCTGTTTCGGGATGGCTCCCACATGGCCCTGCGCCCCCCAGGAGGCCATGTCTCC
TACCAACCTGACCAAGGGACTCTGTGGATCTTCGCCCTGAGGGACGTCCCCGGCCCACTCCGCG
CCAAGCTGGCCGTCCTGAGGCTCTTTGCCTGCTACATGCAGCGGCGTCTGCGGGAGGAGGGGAC
AGCACCCATGACGGCCACACCCGCCTCTCCTGACTTCTGTCTGCTGAGCTTCACCGCTGATGCC
CAAGCTCTGGCCATGCTCTTTAGCAATGGGACAGTGCAGGTCAGTTCCAAAACCTCCCCAGTCC
AGCTGGTGCTGAGTGGGGAAGGCGAGGACTTTCTGCTCACCATCCAGGAGCCAGGGGGACCCAG
CATGGGCACCTCCTACACGCTGGACGTCCTGCGGAGTCACGGCATCAGCCTTGCGGTCCGCCAC
CACCTGCGCCTTGGACTGCATCTGCTTCAGAGTGTCTAAGGAGCCGGACGGAGATCTGGGCGGA
CCTCTGCGTGATGGTGCTGGTGTCTGTTTCTGTCTGCGCTCCTCCGCCACAGCCAGTGTCTGTG
GAGGGTGGACACATTGGGACCTCTGATGGGTGGGCGTCTTTGATTATTTGACTACTCAAGGTAG
ACTTTTTTTGGATTTTCATTAAAGAAAACAGAACCCTTTAAACTGC

hide sequence

RefSeq Acc Id:

XM_006240921 ⟹ XP_006240983

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,005,864 (-)	NCBI
mRatBN7.2	7	9,346,777 - 9,355,195 (-)	NCBI
Rnor_6.0	7	12,212,910 - 12,221,301 (-)	NCBI
Rnor_5.0	7	12,382,705 - 12,391,125 (-)	NCBI

Sequence:

show sequence

ACAGCGGCAGCGCTGCAGGCAGCACTGGCTTGCCCAGTTCCCGCGCGCGCGCTGCGCACCCAGG
CCCACCCCGCGTCGATGGAGCCCCGGTTGAGGCGGCGGCGAAGCCGCCAGCTAGTGGCCACCTT
CCTGCGTGACCCGGGCTCAGGGCGCGTGTACCGGCGCGGGAAGCTGATCGGCAAGGGCGCCTTC
AGCCGCTGCTACAAGCTCACGGACATGTCCACCAGCGCGGTGTTTGCTCTTAAGGTGGTGCCGA
GGGGCGGAGCGGGGCGGCTGCGCCTGCGCGGGAAGGTGGAGCGTGAGATCGCCCTGCACAGCCG
CCTGCACCACCGCAACATCGTGGCCTTCCACGCACACTTTGCTGACCGCGACCACGTGTATATG
GTGCTGGAGTACTGTAGCCGCCAGTCCTTGGCTCATGTACTGAAAGTGCGGCGGACCCTGACGG
AGCCTGAAGTGCGCTACTACTTTCGGGGCCTGGTCAGTGGCCTCCGCTACCTGCACCAACAACG
CATCGTGCACAGGGACCTGAAACCCAGTAATTTCTTCCTTAACAAGAACATGGAAGTTAAGATA
GGTGACCTGGGGCTGGCTGCCCGTGTGGGGCCCGCTGGCCGCTGCCACAGGGTGCTCTGTGGGA
CTCCGAACTTCCAGGCTCCTGAAGTGGTGTCCCGAAATGGACACTCGGCCAAGTCTGACATCTG
GGCCCTGGGGTGCATTATGTACACGGTGCTGACGGGCACGCCCCCCTTCGCTGCCGCACCCTTG
TCCGAGATGTACCAAAACATCCGAGACGGTCACTACCTTGAGCCCACTCAGCTGTCACCCAGCG
CCCGTAGCCTCATTGCACGACTTCTGGCACCGGACCCTGATGAGCGGCCCAGCCTGGACCACTT
ACTGCAAGATGACTTTTTTAGTCAGGGCTTTACCCCAGAGCGGCTGCCTCCACATTCCTGCCAC
AGCCCACCCGTGTTTGCCTTCCCCCCGCCACTGGGCAGGTTGTTCCGGAAGGTGGGCCAACTCC
TGCTGACCCAGTGCCGGCCGCCCTGTCCCTTTACCTCAAAAGAGGCCTCAGGCCCGGGAGAAGA
GAGTACAGAACCTGACCACATGGAGGCCAGCAACGAGGAAGGGGCTCCTCTCTGCACTGAGAGC
CGAATCCACCTCCTCACTCTTGGAACCCCTCGGACTGACCCGGCCGATGCGAAGGGGACCTTGG
CCCTGCAGCTGGAGGTGGCAACCAGAAAACTGTGCCTCTGCTTGGATGCAGGACCTGTGGGTAG
GACGGCCACCCCAAAGTGCAGGACTGAGGCAGCCTGGAGGGGCCCTAAACCAGCTGGACAGGAC
CCCCCCGGGGAGCAGCGCTCTGTCCTCTGGGCTCCCAAGTGGGTGGATTATTCCCTCAAGTATG
GCTTCGGTTACCAGCTGTCGGATGGGGGCAGTGGCGTGCTGTTTCGGGATGGCTCCCACATGGC
CCTGCGCCCCCCAGGAGGCCATGTCTCCTACCAACCTGACCAAGGGACTCTGTGGATCTTCGCC
CTGAGGGACGTCCCCGGCCCACTCCGCGCCAAGCTGGCCGTCCTGAGGCTCTTTGCCTGCTACA
TGCAGCGGCGTCTGCGGGAGGAGGGGACAGCACCCATGACGGCCACACCCGCCTCTCCTGACTT
CTGTCTGCTGAGCTTCACCGCTGATGCCCAAGCTCTGGCCATGCTCTTTAGCAATGGGACAGTG
CAGGTCAGTTCCAAAACCTCCCCAGTCCAGCTGGTGCTGAGTGGGGAAGGCGAGGACTTTCTGC
TCACCATCCAGGAGCCAGGGGGACCCAGCATGGGCACCTCCTACACGCTGGACGTCCTGCGGAG
TCACGGCATCAGCCTTGCGGTCCGCCACCACCTGCGCCTTGGACTGCATCTGCTTCAGAGTGTC
TAAGGAGCCGGACGGAGATCTGGGCGGACCTCTGCGTGATGGTGCTGGTGTCTGTTTCTGTCTG
CGCTCCTCCGCCACAGCCAGTGTCTGTGGAGGGTGGACACATTGGGACCTCTGATGGGTGGGCG
TCTTTGATTATTTGACTACTCAAGGTAGACTTTTTTTGGATTTTCATTAAAGAAAACAGAACCC
TTTAAACTGCT

hide sequence

RefSeq Acc Id:

XM_006240922 ⟹ XP_006240984

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,005,876 (-)	NCBI
mRatBN7.2	7	9,346,777 - 9,355,195 (-)	NCBI
Rnor_6.0	7	12,212,910 - 12,221,300 (-)	NCBI
Rnor_5.0	7	12,382,705 - 12,391,125 (-)	NCBI

Sequence:

show sequence

CAGCGGCAGCGCTGCAGGCAGCACTGGCTTGCCCAGTTCCCGCGCGCGCGCTGCGCACCCAGGC
CCACCCCGCGTCGATGGAGCCCCGGTTGAGGCGGCGGCGAAGCCGCCAGCTAGTGGCCACCTTC
CTGCGTGACCCGGGCTCAGGGCGCGTGTACCGGCGCGGGAAGCTGATCGGCAAGGGCGCCTTCA
GCCGCTGCTACAAGCTCACGGACATGTCCACCAGCGCGGTGTTTGCTCTTAAGGTGGTGCCGAG
GGGCGGAGCGGGGCGGCTGCGCCTGCGCGGGAAGGTGGAGCGTGAGATCGCCCTGCACAGCCGC
CTGCACCACCGCAACATCGTGGCCTTCCACGCACACTTTGCTGACCGCGACCACGTGTATATGG
TGCTGGAGTACTGTAGCCGCCAGTCCTTGGCTCATGTACTGAAAGTGCGGCGGACCCTGACGGA
GCCTGAAGTGCGCTACTACTTTCGGGGCCTGGTCAGTGGCCTCCGCTACCTGCACCAACAACGC
ATCGTGCACAGGGACCTGAAACCCAGTAATTTCTTCCTTAACAAGAACATGGAAGTTAAGATAG
GTGACCTGGGGCTGGCTGCCCGTGTGGGGCCCGCTGGCCGCTGCCACAGGGTGCTCTGTGGGAC
TCCGAACTTCCAGGCTCCTGAAGTGGTGTCCCGAAATGGACACTCGGCCAAGTCTGACATCTGG
GCCCTGGGGTGCATTATGTACACGGTGCTGACGGGCACGCCCCCCTTCGCTGCCGCACCCTTGT
CCGAGATGTACCAAAACATCCGAGACGGTCACTACCTTGAGCCCACTCAGCTGTCACCCAGCGC
CCGTAGCCTCATTGCACGACTTCTGGCACCGGACCCTGATGAGCGGCCCAGCCTGGACCACTTA
CTGCAAGATGACTTTTTTAGTCAGGGCTTTACCCCAGAGCGGCTGCCTCCACATTCCTGCCACA
GCCCACCCGTGTTTGCCTTCCCCCCGCCACTGGGCAGGTTGTTCCGGAAGGTGGGCCAACTCCT
GCTGACCCAGTGCCGGCCGCCCTGTCCCTTTACCTCAAAAGAGGCCTCAGGCCCGGGAGAAGAG
AGTACAGAACCTGACCACATGGAGGCCAGCAACGAGGAAGGGGCTCCTCTCTGCACTGAGAGCC
GAATCCACCTCCTCACTCTTGGAACCCCTCGGACTGACCCGGCCGATGCGAAGGGGACCTTGGC
CCTGCAGCTGGAGGTGGCAACCAGAAAACTGTGCCTCTGCTTGGATGCAGGACCTGTGGCTGGA
CAGGACCCCCCCGGGGAGCAGCGCTCTGTCCTCTGGGCTCCCAAGTGGGTGGATTATTCCCTCA
AGTATGGCTTCGGTTACCAGCTGTCGGATGGGGGCAGTGGCGTGCTGTTTCGGGATGGCTCCCA
CATGGCCCTGCGCCCCCCAGGAGGCCATGTCTCCTACCAACCTGACCAAGGGACTCTGTGGATC
TTCGCCCTGAGGGACGTCCCCGGCCCACTCCGCGCCAAGCTGGCCGTCCTGAGGCTCTTTGCCT
GCTACATGCAGCGGCGTCTGCGGGAGGAGGGGACAGCACCCATGACGGCCACACCCGCCTCTCC
TGACTTCTGTCTGCTGAGCTTCACCGCTGATGCCCAAGCTCTGGCCATGCTCTTTAGCAATGGG
ACAGTGCAGGTCAGTTCCAAAACCTCCCCAGTCCAGCTGGTGCTGAGTGGGGAAGGCGAGGACT
TTCTGCTCACCATCCAGGAGCCAGGGGGACCCAGCATGGGCACCTCCTACACGCTGGACGTCCT
GCGGAGTCACGGCATCAGCCTTGCGGTCCGCCACCACCTGCGCCTTGGACTGCATCTGCTTCAG
AGTGTCTAAGGAGCCGGACGGAGATCTGGGCGGACCTCTGCGTGATGGTGCTGGTGTCTGTTTC
TGTCTGCGCTCCTCCGCCACAGCCAGTGTCTGTGGAGGGTGGACACATTGGGACCTCTGATGGG
TGGGCGTCTTTGATTATTTGACTACTCAAGGTAGACTTTTTTTGGATTTTCATTAAAGAAAACA
GAACCCTTTAAACTGCT

hide sequence

RefSeq Acc Id:

XM_006240923 ⟹ XP_006240985

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,005,864 (-)	NCBI
mRatBN7.2	7	9,346,777 - 9,355,196 (-)	NCBI
Rnor_6.0	7	12,212,910 - 12,221,301 (-)	NCBI
Rnor_5.0	7	12,382,705 - 12,391,125 (-)	NCBI

Sequence:

show sequence

ACAGCGGCAGCGCTGCAGGCAGCACTGGCTTGCCCAGTTCCCGCGCGCGCGCTGCGCACCCAGG
CCCACCCCGCGTCGATGGAGCCCCGGTTGAGGCGGCGGCGAAGCCGCCAGCTAGTGGCCACCTT
CCTGCGTGACCCGGGCTCAGGGCGCGTGTACCGGCGCGGGAAGCTGATCGGCAAGGGCGCCTTC
AGCCGCTGCTACAAGCTCACGGACATGTCCACCAGCGCGGTGTTTGCTCTTAAGGTGGTGCCGA
GGGGCGGAGCGGGGCGGCTGCGCCTGCGCGGGAAGTCCTTGGCTCATGTACTGAAAGTGCGGCG
GACCCTGACGGAGCCTGAAGTGCGCTACTACTTTCGGGGCCTGGTCAGTGGCCTCCGCTACCTG
CACCAACAACGCATCGTGCACAGGGACCTGAAACCCAGTAATTTCTTCCTTAACAAGAACATGG
AAGTTAAGATAGGTGACCTGGGGCTGGCTGCCCGTGTGGGGCCCGCTGGCCGCTGCCACAGGGT
GCTCTGTGGGACTCCGAACTTCCAGGCTCCTGAAGTGGTGTCCCGAAATGGACACTCGGCCAAG
TCTGACATCTGGGCCCTGGGGTGCATTATGTACACGGTGCTGACGGGCACGCCCCCCTTCGCTG
CCGCACCCTTGTCCGAGATGTACCAAAACATCCGAGACGGTCACTACCTTGAGCCCACTCAGCT
GTCACCCAGCGCCCGTAGCCTCATTGCACGACTTCTGGCACCGGACCCTGATGAGCGGCCCAGC
CTGGACCACTTACTGCAAGATGACTTTTTTAGTCAGGGCTTTACCCCAGAGCGGCTGCCTCCAC
ATTCCTGCCACAGCCCACCCGTGTTTGCCTTCCCCCCGCCACTGGGCAGGTTGTTCCGGAAGGT
GGGCCAACTCCTGCTGACCCAGTGCCGGCCGCCCTGTCCCTTTACCTCAAAAGAGGCCTCAGGC
CCGGGAGAAGAGAGTACAGAACCTGACCACATGGAGGCCAGCAACGAGGAAGGGGCTCCTCTCT
GCACTGAGAGCCGAATCCACCTCCTCACTCTTGGAACCCCTCGGACTGACCCGGCCGATGCGAA
GGGGACCTTGGCCCTGCAGCTGGAGGTGGCAACCAGAAAACTGTGCCTCTGCTTGGATGCAGGA
CCTGTGGGTAGGACGGCCACCCCAAAGTGCAGGACTGAGGCAGCCTGGAGGGGCCCTAAACCAG
CTGGACAGGACCCCCCCGGGGAGCAGCGCTCTGTCCTCTGGGCTCCCAAGTGGGTGGATTATTC
CCTCAAGTATGGCTTCGGTTACCAGCTGTCGGATGGGGGCAGTGGCGTGCTGTTTCGGGATGGC
TCCCACATGGCCCTGCGCCCCCCAGGAGGCCATGTCTCCTACCAACCTGACCAAGGGACTCTGT
GGATCTTCGCCCTGAGGGACGTCCCCGGCCCACTCCGCGCCAAGCTGGCCGTCCTGAGGCTCTT
TGCCTGCTACATGCAGCGGCGTCTGCGGGAGGAGGGGACAGCACCCATGACGGCCACACCCGCC
TCTCCTGACTTCTGTCTGCTGAGCTTCACCGCTGATGCCCAAGCTCTGGCCATGCTCTTTAGCA
ATGGGACAGTGCAGGTCAGTTCCAAAACCTCCCCAGTCCAGCTGGTGCTGAGTGGGGAAGGCGA
GGACTTTCTGCTCACCATCCAGGAGCCAGGGGGACCCAGCATGGGCACCTCCTACACGCTGGAC
GTCCTGCGGAGTCACGGCATCAGCCTTGCGGTCCGCCACCACCTGCGCCTTGGACTGCATCTGC
TTCAGAGTGTCTAAGGAGCCGGACGGAGATCTGGGCGGACCTCTGCGTGATGGTGCTGGTGTCT
GTTTCTGTCTGCGCTCCTCCGCCACAGCCAGTGTCTGTGGAGGGTGGACACATTGGGACCTCTG
ATGGGTGGGCGTCTTTGATTATTTGACTACTCAAGGTAGACTTTTTTTGGATTTTCATTAAAGA
AAACAGAACCCTTTAAACTGCT

hide sequence

RefSeq Acc Id:

XM_006240925 ⟹ XP_006240987

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,999,668 - 10,005,878 (-)	NCBI
mRatBN7.2	7	9,348,276 - 9,355,196 (-)	NCBI
Rnor_6.0	7	12,214,448 - 12,221,302 (-)	NCBI
Rnor_5.0	7	12,382,705 - 12,391,125 (-)	NCBI

Sequence:

show sequence

CACAGCGGCAGCGCTGCAGGCAGCACTGGCTTGCCCAGTTCCCGCGCGCGCGCTGCGCACCCAG
GCCCACCCCGCGTCGATGGAGCCCCGGTTGAGGCGGCGGCGAAGCCGCCAGCTAGTGGCCACCT
TCCTGCGTGACCCGGGCTCAGGGCGCGTGTACCGGCGCGGGAAGCTGATCGGCAAGGGCGCCTT
CAGCCGCTGCTACAAGCTCACGGACATGTCCACCAGCGCGGTGTTTGCTCTTAAGGTGGTGCCG
AGGGGCGGAGCGGGGCGGCTGCGCCTGCGCGGGAAGGTGGAGCGTGAGATCGCCCTGCACAGCC
GCCTGCACCACCGCAACATCGTGGCCTTCCACGCACACTTTGCTGACCGCGACCACGTGTATAT
GGTGCTGGAGTACTGTAGCCGCCAGTCCTTGGCTCATGTACTGAAAGTGCGGCGGACCCTGACG
GAGCCTGAAGTGCGCTACTACTTTCGGGGCCTGGTCAGTGGCCTCCGCTACCTGCACCAACAAC
GCATCGTGCACAGGGACCTGAAACCCAGTAATTTCTTCCTTAACAAGAACATGGAAGTTAAGAT
AGGTGACCTGGGGCTGGCTGCCCGTGTGGGGCCCGCTGGCCGCTGCCACAGGGTGCTCTGTGGG
ACTCCGAACTTCCAGGCTCCTGAAGTGGTGTCCCGAAATGGACACTCGGCCAAGTCTGACATCT
GGGCCCTGGGGTGCATTATGTACACGGTGCTGACGGGCACGCCCCCCTTCGCTGCCGCACCCTT
GTCCGAGATGTACCAAAACATCCGAGACGGTCACTACCTTGAGCCCACTCAGCTGTCACCCAGC
GCCCGTAGCCTCATTGCACGACTTCTGGCACCGGACCCTGATGAGCGGCCCAGCCTGGACCACT
TACTGCAAGATGACTTTTTTAGTCAGGGCTTTACCCCAGAGCGGCTGCCTCCACATTCCTGCCA
CAGCCCACCCGTGTTTGCCTTCCCCCCGCCACTGGGCAGGTTGTTCCGGAAGGTGGGCCAACTC
CTGCTGACCCAGTGCCGGCCGCCCTGTCCCTTTACCTCAAAAGAGGCCTCAGGCCCGGGAGAAG
AGAGTACAGAACCTGACCACATGGAGGCCAGCAACGAGGAAGGGGCTCCTCTCTGCACTGAGAG
CCGAATCCACCTCCTCACTCTTGGAACCCCTCGGACTGACCCGGCCGATGCGAAGGGGACCTTG
GCCCTGCAGCTGGAGGTGGCAACCAGAAAACTGTGCCTCTGCTTGGATGCAGGACCTGTGGGTA
GGACGGCCACCCCAAAGTGCAGGACTGAGGCAGCCTGGAGGGGCCCTAAACCAGCTGGACAGGA
CCCCCCCGGGGAGCAGCGCTCTGTCCTCTGGGCTCCCAAGTGGGTGGATTATTCCCTCAAGTAT
GGCTTCGGTTACCAGCTGTCGGATGGGGGCAGTGGCGTGCTGTTTCGGGATGGCTCCCACATGG
CCCTGCGCCCCCCAGGAGGCTGGGGACCGAACCCAGGGCCTTGTGCTTCCTAGCCATGTCTCCT
ACCAACCTGACCAAGGGACTCTGTGGATCTTCGCCCTGAGGGACGTCCCCGGCCCACTCCGCGC
CAAGCTGGC

hide sequence

RefSeq Acc Id:

XM_008765098 ⟹ XP_008763320

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,005,871 (-)	NCBI
mRatBN7.2	7	9,346,990 - 9,355,195 (-)	NCBI
Rnor_6.0	7	12,213,163 - 12,221,302 (-)	NCBI

Sequence:

show sequence

CACAGCGGCAGCGCTGCAGGCAGCACTGGCTTGCCCAGTTCCCGCGCGCGCGCTGCGCACCCAG
GCCCACCCCGCGTCGATGGAGCCCCGGTTGAGGCGGCGGCGAAGCCGCCAGCTAGTGGCCACCT
TCCTGCGTGACCCGGGCTCAGGGCGCGTGTACCGGCGCGGGAAGCTGATCGGCAAGGGCGCCTT
CAGCCGCTGCTACAAGCTCACGGACATGTCCACCAGCGCGGTGTTTGCTCTTAAGGTGGTGCCG
AGGGGCGGAGCGGGGCGGCTGCGCCTGCGCGGGAAGGTGGAGCGTGAGATCGCCCTGCACAGCC
GCCTGCACCACCGCAACATCGTGGCCTTCCACGCACACTTTGCTGACCGCGACCACGTGTATAT
GGTGCTGGAGTACTGTAGCCGCCAGTCCTTGGCTCATGTACTGAAAGTGCGGCGGACCCTGACG
GAGCCTGAAGTGCGCTACTACTTTCGGGGCCTGGTCAGTGGCCTCCGCTACCTGCACCAACAAC
GCATCGTGCACAGGGACCTGAAACCCAGTAATTTCTTCCTTAACAAGAACATGGAAGTTAAGAT
AGGTGACCTGGGGCTGGCTGCCCGTGTGGGGCCCGCTGGCCGCTGCCACAGGGTGCTCTGTGGG
ACTCCGAACTTCCAGGCTCCTGAAGTGGTGTCCCGAAATGGACACTCGGCCAAGTCTGACATCT
GGGCCCTGGGGTGCATTATGTACACGGTGCTGACGGGCACGCCCCCCTTCGCTGCCGCACCCTT
GTCCGAGATGTACCAAAACATCCGAGACGGTCACTACCTTGAGCCCACTCAGCTGTCACCCAGC
GCCCGTAGCCTCATTGCACGACTTCTGGCACCGGACCCTGATGAGCGGCCCAGCCTGGACCACT
TACTGCAAGATGACTTTTTTAGTCAGGGCTTTACCCCAGAGCGGCTGCCTCCACATTCCTGCCA
CAGCCCACCCGTGTTTGCCTTCCCCCCGCCACTGGGCAGGTTGTTCCGGAAGGTGGGCCAACTC
CTGCTGACCCAGTGCCGGCCGCCCTGTCCCTTTACCTCAAAAGAGGCCTCAGGCCCGGGAGAAG
AGAGTACAGAACCTGACCACATGGAGGCCAGCAACGAGGAAGGGGCTCCTCTCTGCACTGAGAG
CCGAATCCACCTCCTCACTCTTGGAACCCCTCGGACTGACCCGGCCGATGCGAAGGGGACCTTG
GCCCTGCAGCTGGAGGTGGCAACCAGAAAACTGTGCCTCTGCTTGGATGCAGGACCTGTGGGTA
GGACGGCCACCCCAAAGTGCAGGACTGAGGCAGCCTGGAGGGGCCCTAAACCAGCTGGACAGGA
CCCCCCCGGGGAGCAGCGCTCTGTCCTCTGGGCTCCCAAGTGGGTGGATTATTCCCTCAAGTAT
GGCTTCGGTTACCAGCTGTCGGATGGGGGCAGTGGCGTGCTGTTTCGGGATGGCTCCCACATGG
CCCTGCGCCCCCCAGGAGGCCATGTCTCCTACCAACCTGACCAAGGGACTCTGTGGATCTTCGC
CCTGAGGGACGTCCCCGGCCCACTCCGCGCCAAGCTGGCCGTCCTGAGGCTCTTTGCCTGCTAC
ATGCAGCGGCGTCTGCGGGAGGAGGGGACAGCACCCATGACGGCCACACCCGCCTCTCCTGACT
TCTGTCTGCTGAGCTTCACCGCTGATGCCCAAGCTCTGGCCATGCTCTTTAGCAATGGGACAGT
GCAGGTGCCTATCCTGAGGGTGACCACTGGGGCTCACCTTGACCTTGGTCTCTCTCCCAGGTCA
GTTCCAAAACCTCCCCAGTCCAGCTGGTGCTGAGTGGGGAAGGCGAGGACTTTCTGCTCACCAT
CCAGGAGCCAGGGGGACCCAGCATGGGCACCTCCTACACGCTGGACGTCCTGCGGAGTCACGGC
ATCAGCC

hide sequence

RefSeq Acc Id:

XM_008765099 ⟹ XP_008763321

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,005,785 (-)	NCBI
mRatBN7.2	7	9,346,777 - 9,355,187 (-)	NCBI
Rnor_6.0	7	12,212,910 - 12,221,206 (-)	NCBI

Sequence:

show sequence

GCGGCGGCGAAGCCGCCAGCTAGTGGCCACCTTCCTGCGTGACCCGGGCTCAGGGCGCGTGTAC
CGGCGCGGGAAGCTGATCGGCAAGGGTGTCGTGAGTCCCTCACTGTCCTGCGTCGGGGAGTACA
CGCGTCTCCTGCTCTGGCAAAGGCGCCTTCAGCCGCTGCTACAAGCTCACGGACATGTCCACCA
GCGCGGTGTTTGCTCTTAAGGTGGTGCCGAGGGGCGGAGCGGGGCGGCTGCGCCTGCGCGGGAA
GGTGGAGCGTGAGATCGCCCTGCACAGCCGCCTGCACCACCGCAACATCGTGGCCTTCCACGCA
CACTTTGCTGACCGCGACCACGTGTATATGGTGCTGGAGTACTGTAGCCGCCAGTCCTTGGCTC
ATGTACTGAAAGTGCGGCGGACCCTGACGGAGCCTGAAGTGCGCTACTACTTTCGGGGCCTGGT
CAGTGGCCTCCGCTACCTGCACCAACAACGCATCGTGCACAGGGACCTGAAACCCAGTAATTTC
TTCCTTAACAAGAACATGGAAGTTAAGATAGGTGACCTGGGGCTGGCTGCCCGTGTGGGGCCCG
CTGGCCGCTGCCACAGGGTGCTCTGTGGGACTCCGAACTTCCAGGCTCCTGAAGTGGTGTCCCG
AAATGGACACTCGGCCAAGTCTGACATCTGGGCCCTGGGGTGCATTATGTACACGGTGCTGACG
GGCACGCCCCCCTTCGCTGCCGCACCCTTGTCCGAGATGTACCAAAACATCCGAGACGGTCACT
ACCTTGAGCCCACTCAGCTGTCACCCAGCGCCCGTAGCCTCATTGCACGACTTCTGGCACCGGA
CCCTGATGAGCGGCCCAGCCTGGACCACTTACTGCAAGATGACTTTTTTAGTCAGGGCTTTACC
CCAGAGCGGCTGCCTCCACATTCCTGCCACAGCCCACCCGTGTTTGCCTTCCCCCCGCCACTGG
GCAGGTTGTTCCGGAAGGTGGGCCAACTCCTGCTGACCCAGTGCCGGCCGCCCTGTCCCTTTAC
CTCAAAAGAGGCCTCAGGCCCGGGAGAAGAGAGTACAGAACCTGACCACATGGAGGCCAGCAAC
GAGGAAGGGGCTCCTCTCTGCACTGAGAGCCGAATCCACCTCCTCACTCTTGGAACCCCTCGGA
CTGACCCGGCCGATGCGAAGGGGACCTTGGCCCTGCAGCTGGAGGTGGCAACCAGAAAACTGTG
CCTCTGCTTGGATGCAGGACCTGTGGGTAGGACGGCCACCCCAAAGTGCAGGACTGAGGCAGCC
TGGAGGGGCCCTAAACCAGCTGGACAGGACCCCCCCGGGGAGCAGCGCTCTGTCCTCTGGGCTC
CCAAGTGGGTGGATTATTCCCTCAAGTATGGCTTCGGTTACCAGCTGTCGGATGGGGGCAGTGG
CGTGCTGTTTCGGGATGGCTCCCACATGGCCCTGCGCCCCCCAGGAGGCCATGTCTCCTACCAA
CCTGACCAAGGGACTCTGTGGATCTTCGCCCTGAGGGACGTCCCCGGCCCACTCCGCGCCAAGC
TGGCCGTCCTGAGGCTCTTTGCCTGCTACATGCAGCGGCGTCTGCGGGAGGAGGGGACAGCACC
CATGACGGCCACACCCGCCTCTCCTGACTTCTGTCTGCTGAGCTTCACCGCTGATGCCCAAGCT
CTGGCCATGCTCTTTAGCAATGGGACAGTGCAGGTCAGTTCCAAAACCTCCCCAGTCCAGCTGG
TGCTGAGTGGGGAAGGCGAGGACTTTCTGCTCACCATCCAGGAGCCAGGGGGACCCAGCATGGG
CACCTCCTACACGCTGGACGTCCTGCGGAGTCACGGCATCAGCCTTGCGGTCCGCCACCACCTG
CGCCTTGGACTGCATCTGCTTCAGAGTGTCTAAGGAGCCGGACGGAGATCTGGGCGGACCTCTG
CGTGATGGTGCTGGTGTCTGTTTCTGTCTGCGCTCCTCCGCCACAGCCAGTGTCTGTGGAGGGT
GGACACATTGGGACCTCTGATGGGTGGGCGTCTTTGATTATTTGACTACTCAAGGTAGACTTTT
TTTGGATTTTCATTAAAGAAAACAGAACCCTTTAAACTGCT

hide sequence

RefSeq Acc Id:

XM_039079003 ⟹ XP_038934931

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,005,785 (-)	NCBI
mRatBN7.2	7	9,346,777 - 9,355,188 (-)	NCBI

RefSeq Acc Id:

XM_039079005 ⟹ XP_038934933

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,002,298 (-)	NCBI
mRatBN7.2	7	9,346,777 - 9,351,715 (-)	NCBI

RefSeq Acc Id:

XM_063263417 ⟹ XP_063119487

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,005,866 (-)	NCBI

RefSeq Acc Id:

XM_063263418 ⟹ XP_063119488

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,005,862 (-)	NCBI

RefSeq Acc Id:

XM_063263419 ⟹ XP_063119489

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,453 - 10,001,438 (-)	NCBI

RefSeq Acc Id:

XM_063263420 ⟹ XP_063119490

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,001,180 - 10,006,959 (-)	NCBI

RefSeq Acc Id:

XR_005486602

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	10,000,504 - 10,005,900 (-)	NCBI
mRatBN7.2	7	9,349,833 - 9,355,195 (-)	NCBI

RefSeq Acc Id:

XR_355240

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,806 - 10,005,878 (-)	NCBI
mRatBN7.2	7	9,346,777 - 9,355,196 (-)	NCBI
Rnor_6.0	7	12,212,910 - 12,221,302 (-)	NCBI
Rnor_5.0	7	12,382,705 - 12,391,125 (-)	NCBI

Sequence:

show sequence

CACAGCGGCAGCGCTGCAGGCAGCACTGGCTTGCCCAGTTCCCGCGCGCGCGCTGCGCACCCAG
GCCCACCCCGCGTCGATGGAGCCCCGGTTGAGGCGGCGGCGAAGCCGCCAGCTAGTGGCCACCT
TCCTGCGTGACCCGGGCTCAGGGCGCGTGTACCGGCGCGGGAAGCTGATCGGCAAGGGCGCCTT
CAGCCGCTGCTACAAGCTCACGGACATGTCCACCAGCGCGGTGTTTGCTCTTAAGGTGGTGCCG
AGGGGCGGAGCGGGGCGGCTGCGCCTGCGCGGGAAGGTGGAGCGTGAGATCGCCCTGCACAGCC
GCCTGCACCACCGCAACATCGTGGCCTTCCACGCACACTTTGCTGACCGCGACCACGTGTATAT
GGTGCTGGAGTACTGTAGCCGCCAGTCCTTGGCTCATGTACTGAAAGTGCGGCGGACCCTGACG
GAGCCTGAAGTGCGCTACTACTTTCGGGGCCTGGTCAGTGGCCTCCGCTACCTGCACCAACAAC
GCATCGTGCACAGGGACCTGAAACCCAGTAATTTCTTCCTTAACAAGAACATGGAAGTTAAGAT
AGGTGACCTGGGGCTGGCTGCCCGTGTGGGGCCCGCTGGCCGCTGCCACAGGGTGCTCTGTGGG
ACTCCGAACTTCCAGGCTCCTGAAGTGGTGTCCCGAAATGGACACTCGGCCAAGTCTGACATCT
GGGCCCTGGGGTGCATTATGTACACGGTGCTGACGGGCACGCCCCCCTTCGCTGCCGCACCCTT
GTCCGAGATGTACCAAAACATCCGAGACGGTCACTACCTTGAGCCCACTCAGCTGTCACCCAGC
GCCCGTAGCCTCATTGCACGACTTCTGGCACCGGACCCTGATGAGCGGCCCAGCCTGGACCACT
TACTGCAAGATGACTTTTTTAGTCAGGGCTTTACCCCAGAGCGGCTGCCTCCACATTCCTGCCA
CAGCCCACCCGTGTTTGCCTTCCCCCCGCCACTGGGCAGGTTGTTCCGGAAGGTGGGCCAACTC
CTGCTGACCCAGTGCCGGCCGCCCTGTCCCTTTACCTCAAAAGAGGCCTCAGGCCCGGGAGAAG
AGAGTACAGAACCTGACCACATGGAGGCCAGCAACGAGGAAGGGGCTCCTCTCTGCACTGAGAG
CCGAATCCACCTCCTCACTCTTGGAACCCCTCGGACTGACCCGGCCGATGCGAAGGGGACCTTG
GCCCTGCAGCTGGAGGTGGCAACCAGAAAACTGTGCCTCTGCTTGGATGCAGGACCTGTGGGTA
GGACGGCCACCCCAAAGTGCAGGACTGAGGCAGCCTGGAGGGGCCCTAAACCAGCTGGACAGGA
CCCCCCCGGGGAGCAGCGCTCTGTCCTCTGGGCTCCCAAGTGGGTGGATTATTCCCTCAAGTAT
GGCTTCGGTTACCAGCTGTCGGATGGGGGCAGTGGCGTGCTGTTTCGGGATGGCTCCCACATGG
CCCTGCGCCCCCCAGGAGGGGACTCTGTGGATCTTCGCCCTGAGGGACGTCCCCGGCCCACTCC
GCGCCAAGCTGGCCGTCCTGAGGCTCTTTGCCTGCTACATGCAGCGGCGTCTGCGGGAGGAGGG
GACAGCACCCATGACGGCCACACCCGCCTCTCCTGACTTCTGTCTGCTGAGCTTCACCGCTGAT
GCCCAAGCTCTGGCCATGCTCTTTAGCAATGGGACAGTGCAGGTCAGTTCCAAAACCTCCCCAG
TCCAGCTGGTGCTGAGTGGGGAAGGCGAGGACTTTCTGCTCACCATCCAGGAGCCAGGGGGACC
CAGCATGGGCACCTCCTACACGCTGGACGTCCTGCGGAGTCACGGCATCAGCCTTGCGGTCCGC
CACCACCTGCGCCTTGGACTGCATCTGCTTCAGAGTGTCTAAGGAGCCGGACGGAGATCTGGGC
GGACCTCTGCGTGATGGTGCTGGTGTCTGTTTCTGTCTGCGCTCCTCCGCCACAGCCAGTGTCT
GTGGAGGGTGGACACATTGGGACCTCTGATGGGTGGGCGTCTTTGATTATTTGACTACTCAAGG
TAGACTTTTTTTGGATTTTCATTAAAGAAAACAGAACCCTTTAAACTGCT

hide sequence

RefSeq Acc Id:

XR_355241

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	9,997,764 - 10,005,878 (-)	NCBI
mRatBN7.2	7	9,347,088 - 9,355,196 (-)	NCBI
Rnor_6.0	7	12,213,272 - 12,221,302 (-)	NCBI
Rnor_5.0	7	12,382,705 - 12,391,125 (-)	NCBI

Sequence:

show sequence

CACAGCGGCAGCGCTGCAGGCAGCACTGGCTTGCCCAGTTCCCGCGCGCGCGCTGCGCACCCAG
GCCCACCCCGCGTCGATGGAGCCCCGGTTGAGGCGGCGGCGAAGCCGCCAGCTAGTGGCCACCT
TCCTGCGTGACCCGGGCTCAGGGCGCGTGTACCGGCGCGGGAAGCTGATCGGCAAGGGCGCCTT
CAGCCGCTGCTACAAGCTCACGGACATGTCCACCAGCGCGGTGTTTGCTCTTAAGGTGGTGCCG
AGGGGCGGAGCGGGGCGGCTGCGCCTGCGCGGGAAGGTGGAGCGTGAGATCGCCCTGCACAGCC
GCCTGCACCACCGCAACATCGTGGCCTTCCACGCACACTTTGCTGACCGCGACCACGTGTATAT
GGTGCTGGAGTACTGTAGCCGCCAGTCCTTGGCTCATGTACTGAAAGTGCGGCGGACCCTGACG
GAGCCTGAAGTGCGCTACTACTTTCGGGGCCTGGTCAGTGGCCTCCGCTACCTGCACCAACAAC
GCATCGTGCACAGGGACCTGAAACCCAGTAATTTCTTCCTTAACAAGAACATGGAAGTTAAGAT
AGGTGACCTGGGGCTGGCTGCCCGTGTGGGGCCCGCTGGCCGCTGCCACAGGGTGCTCTGTGGG
ACTCCGAACTTCCAGGCTCCTGAAGTGGTGTCCCGAAATGGACACTCGGCCAAGTCTGACATCT
GGGCCCTGGGGTGCATTATGTACACGGTGCTGACGGGCACGCCCCCCTTCGCTGCCGCACCCTT
GTCCGAGATGTACCAAAACATCCGAGACGGTCACTACCTTGAGCCCACTCAGCTGTCACCCAGC
GCCCGTAGCCTCATTGCACGACTTCTGGCACCGGACCCTGATGAGCGGCCCAGCCTGGACCACT
TACTGCAAGATGACTTTTTTAGTCAGGGCTTTACCCCAGAGCGGCTGCCTCCACATTCCTGCCA
CAGCCCACCCGTGTTTGCCTTCCCCCCGCCACTGGGCAGGTTGTTCCGGAAGGTGGGCCAACTC
CTGCTGACCCAGTGCCGGCCGCCCTGTCCCTTTACCTCAAAAGAGGCCTCAGGCCCGGGAGAAG
AGAGTACAGAACCTGACCACATGGAGGCCAGCAACGAGGAAGGGGCTCCTCTCTGCACTGAGAG
CCGAATCCACCTCCTCACTCTTGGAACCCCTCGGACTGACCCGGCCGATGCGAAGGGGACCTTG
GCCCTGCAGCTGGAGGTGGCAACCAGAAAACTGTGCCTCTGCTTGGATGCAGGACCTGTGGGTA
GGACGGCCACCCCAAAGTGCAGGACTGAGGCAGCCTGGAGGGGCCCTAAACCAGCTGGACAGGA
CCCCCCCGGGGAGCAGCGCTCTGTCCTCTGGGCTCCCAAGTGGGTGGATTATTCCCTCAAGTAT
GGCTTCGGTTACCAGCTGTCGGATGGGGGCAGTGGCGTGCTGTTTCGGGATGGCTCCCACATGG
CCCTGCGCCCCCCAGGAGGGGACTCTGTGGATCTTCGCCCTGAGGGACGTCCCCGGCCCACTCC
GCGCCAAGCTGGCCGTCCTGAGGCTCTTTGCCTGCTACATGCAGCGGCGTCTGCGGGAGGAGGG
GACAGCACCCATGACGGCCACACCCGCCTCTCCTGACTTCTGTCTGCTGAGCTTCACCGCTGAT
GCCCAAGCTCTGGCCATGCTCTTTAGCAATGGGACAGTGCAGGTGCCTATCCTGAGGGTGACCA
CTGGGGCTCACCTTGACCTTGGTCTCTCTCCCAGGTCAGTTCCAAAACCTCCCCAGTCCAGCTG

hide sequence

Protein Sequences


Protein RefSeqs	NP_001164028	(Get FASTA)	NCBI Sequence Viewer
	NP_001424353	(Get FASTA)	NCBI Sequence Viewer
	NP_001424354	(Get FASTA)	NCBI Sequence Viewer
	NP_001424355	(Get FASTA)	NCBI Sequence Viewer
	NP_001424356	(Get FASTA)	NCBI Sequence Viewer
	XP_006240983	(Get FASTA)	NCBI Sequence Viewer
	XP_006240984	(Get FASTA)	NCBI Sequence Viewer
	XP_006240985	(Get FASTA)	NCBI Sequence Viewer
	XP_006240987	(Get FASTA)	NCBI Sequence Viewer
	XP_008763320	(Get FASTA)	NCBI Sequence Viewer
	XP_008763321	(Get FASTA)	NCBI Sequence Viewer
	XP_038934931	(Get FASTA)	NCBI Sequence Viewer
	XP_038934933	(Get FASTA)	NCBI Sequence Viewer
	XP_063119487	(Get FASTA)	NCBI Sequence Viewer
	XP_063119488	(Get FASTA)	NCBI Sequence Viewer
	XP_063119489	(Get FASTA)	NCBI Sequence Viewer
	XP_063119490	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL89287	(Get FASTA)	NCBI Sequence Viewer
	EDL89288	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000051194
	ENSRNOP00000051194.5
	ENSRNOP00000100195
	ENSRNOP00000100195.1
	ENSRNOP00000101491.1
	ENSRNOP00000107666
	ENSRNOP00000107666.1

RefSeq Acc Id:

NP_001164028 ⟸ NM_001170557

- Sequence:

show sequence

MEPRLRRRRSRQLVATFLRDPGSGRVYRRGKLIGKGAFSRCYKLTDMSTSAVFALKVVPRGGAG
RLRLRGKVEREIALHSRLHHRNIVAFHAHFADRDHVYMVLEYCSRQSLAHVLKVRRTLTEPEVR
YYFRGLVSGLRYLHQQRIVHRDLKPSNFFLNKNMEVKIGDLGLAARVGPAGRCHRVLCGTPNFQ
APEVVSRNGHSAKSDIWALGCIMYTVLTGTPPFAAAPLSEMYQNIRDGHYLEPTQLSPSARSLI
ARLLAPDPDERPSLDHLLQDDFFSQGFTPERLPPHSCHSPPVFAFPPPLGRLFRKVGQLLLTQC
RPPCPFTSKEASGPGEESTEPDHMEASNEARAPLCTESRIHLLTLGTPRTDPADAKGTLALQLE
VATRKLCLCLDAGPVAGQDPPGEQRSVLWAPKWVDYSLKYGFGYQLSDGGSGVLFRDGSHMALR
PPGGHVSYQPDQGTLWIFALRDVPGPLRAKLAVLRLFACYMQRRLREEGTAPMTATPASPDFCL
LSFTADAQALAMLFSNGTVQVSSKTSPVQLVLSGEGEDFLLTIQEPGGPSMGTSYTLDVLRSHG
ISLAVRHHLRLGLHLLQSV

hide sequence

RefSeq Acc Id:

XP_006240985 ⟸ XM_006240923

- Peptide Label:

isoform X4

- Sequence:

show sequence

MEPRLRRRRSRQLVATFLRDPGSGRVYRRGKLIGKGAFSRCYKLTDMSTSAVFALKVVPRGGAG
RLRLRGKSLAHVLKVRRTLTEPEVRYYFRGLVSGLRYLHQQRIVHRDLKPSNFFLNKNMEVKIG
DLGLAARVGPAGRCHRVLCGTPNFQAPEVVSRNGHSAKSDIWALGCIMYTVLTGTPPFAAAPLS
EMYQNIRDGHYLEPTQLSPSARSLIARLLAPDPDERPSLDHLLQDDFFSQGFTPERLPPHSCHS
PPVFAFPPPLGRLFRKVGQLLLTQCRPPCPFTSKEASGPGEESTEPDHMEASNEEGAPLCTESR
IHLLTLGTPRTDPADAKGTLALQLEVATRKLCLCLDAGPVGRTATPKCRTEAAWRGPKPAGQDP
PGEQRSVLWAPKWVDYSLKYGFGYQLSDGGSGVLFRDGSHMALRPPGGHVSYQPDQGTLWIFAL
RDVPGPLRAKLAVLRLFACYMQRRLREEGTAPMTATPASPDFCLLSFTADAQALAMLFSNGTVQ
VSSKTSPVQLVLSGEGEDFLLTIQEPGGPSMGTSYTLDVLRSHGISLAVRHHLRLGLHLLQSV

hide sequence

RefSeq Acc Id:

XP_006240984 ⟸ XM_006240922

- Peptide Label:

isoform X2

- Sequence:

show sequence

MEPRLRRRRSRQLVATFLRDPGSGRVYRRGKLIGKGAFSRCYKLTDMSTSAVFALKVVPRGGAG
RLRLRGKVEREIALHSRLHHRNIVAFHAHFADRDHVYMVLEYCSRQSLAHVLKVRRTLTEPEVR
YYFRGLVSGLRYLHQQRIVHRDLKPSNFFLNKNMEVKIGDLGLAARVGPAGRCHRVLCGTPNFQ
APEVVSRNGHSAKSDIWALGCIMYTVLTGTPPFAAAPLSEMYQNIRDGHYLEPTQLSPSARSLI
ARLLAPDPDERPSLDHLLQDDFFSQGFTPERLPPHSCHSPPVFAFPPPLGRLFRKVGQLLLTQC
RPPCPFTSKEASGPGEESTEPDHMEASNEEGAPLCTESRIHLLTLGTPRTDPADAKGTLALQLE
VATRKLCLCLDAGPVAGQDPPGEQRSVLWAPKWVDYSLKYGFGYQLSDGGSGVLFRDGSHMALR
PPGGHVSYQPDQGTLWIFALRDVPGPLRAKLAVLRLFACYMQRRLREEGTAPMTATPASPDFCL
LSFTADAQALAMLFSNGTVQVSSKTSPVQLVLSGEGEDFLLTIQEPGGPSMGTSYTLDVLRSHG
ISLAVRHHLRLGLHLLQSV

hide sequence

RefSeq Acc Id:

XP_006240983 ⟸ XM_006240921

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEPRLRRRRSRQLVATFLRDPGSGRVYRRGKLIGKGAFSRCYKLTDMSTSAVFALKVVPRGGAG
RLRLRGKVEREIALHSRLHHRNIVAFHAHFADRDHVYMVLEYCSRQSLAHVLKVRRTLTEPEVR
YYFRGLVSGLRYLHQQRIVHRDLKPSNFFLNKNMEVKIGDLGLAARVGPAGRCHRVLCGTPNFQ
APEVVSRNGHSAKSDIWALGCIMYTVLTGTPPFAAAPLSEMYQNIRDGHYLEPTQLSPSARSLI
ARLLAPDPDERPSLDHLLQDDFFSQGFTPERLPPHSCHSPPVFAFPPPLGRLFRKVGQLLLTQC
RPPCPFTSKEASGPGEESTEPDHMEASNEEGAPLCTESRIHLLTLGTPRTDPADAKGTLALQLE
VATRKLCLCLDAGPVGRTATPKCRTEAAWRGPKPAGQDPPGEQRSVLWAPKWVDYSLKYGFGYQ
LSDGGSGVLFRDGSHMALRPPGGHVSYQPDQGTLWIFALRDVPGPLRAKLAVLRLFACYMQRRL
REEGTAPMTATPASPDFCLLSFTADAQALAMLFSNGTVQVSSKTSPVQLVLSGEGEDFLLTIQE
PGGPSMGTSYTLDVLRSHGISLAVRHHLRLGLHLLQSV

hide sequence

RefSeq Acc Id:

XP_006240987 ⟸ XM_006240925

- Peptide Label:

isoform X9

- Sequence:

show sequence

MEPRLRRRRSRQLVATFLRDPGSGRVYRRGKLIGKGAFSRCYKLTDMSTSAVFALKVVPRGGAG
RLRLRGKVEREIALHSRLHHRNIVAFHAHFADRDHVYMVLEYCSRQSLAHVLKVRRTLTEPEVR
YYFRGLVSGLRYLHQQRIVHRDLKPSNFFLNKNMEVKIGDLGLAARVGPAGRCHRVLCGTPNFQ
APEVVSRNGHSAKSDIWALGCIMYTVLTGTPPFAAAPLSEMYQNIRDGHYLEPTQLSPSARSLI
ARLLAPDPDERPSLDHLLQDDFFSQGFTPERLPPHSCHSPPVFAFPPPLGRLFRKVGQLLLTQC
RPPCPFTSKEASGPGEESTEPDHMEASNEEGAPLCTESRIHLLTLGTPRTDPADAKGTLALQLE
VATRKLCLCLDAGPVGRTATPKCRTEAAWRGPKPAGQDPPGEQRSVLWAPKWVDYSLKYGFGYQ
LSDGGSGVLFRDGSHMALRPPGGWGPNPGPCAS

hide sequence

RefSeq Acc Id:	XP_008763321 ⟸ XM_008765099
- Peptide Label:	isoform X5
- UniProtKB:	A6K8L7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSTSAVFALKVVPRGGAGRLRLRGKVEREIALHSRLHHRNIVAFHAHFADRDHVYMVLEYCSRQ SLAHVLKVRRTLTEPEVRYYFRGLVSGLRYLHQQRIVHRDLKPSNFFLNKNMEVKIGDLGLAAR VGPAGRCHRVLCGTPNFQAPEVVSRNGHSAKSDIWALGCIMYTVLTGTPPFAAAPLSEMYQNIR DGHYLEPTQLSPSARSLIARLLAPDPDERPSLDHLLQDDFFSQGFTPERLPPHSCHSPPVFAFP PPLGRLFRKVGQLLLTQCRPPCPFTSKEASGPGEESTEPDHMEASNEEGAPLCTESRIHLLTLG TPRTDPADAKGTLALQLEVATRKLCLCLDAGPVGRTATPKCRTEAAWRGPKPAGQDPPGEQRSV LWAPKWVDYSLKYGFGYQLSDGGSGVLFRDGSHMALRPPGGHVSYQPDQGTLWIFALRDVPGPL RAKLAVLRLFACYMQRRLREEGTAPMTATPASPDFCLLSFTADAQALAMLFSNGTVQVSSKTSP VQLVLSGEGEDFLLTIQEPGGPSMGTSYTLDVLRSHGISLAVRHHLRLGLHLLQSV hide sequence

RefSeq Acc Id:	XP_008763320 ⟸ XM_008765098
- Peptide Label:	isoform X3
- UniProtKB:	A6K8L7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEPRLRRRRSRQLVATFLRDPGSGRVYRRGKLIGKGAFSRCYKLTDMSTSAVFALKVVPRGGAG RLRLRGKVEREIALHSRLHHRNIVAFHAHFADRDHVYMVLEYCSRQSLAHVLKVRRTLTEPEVR YYFRGLVSGLRYLHQQRIVHRDLKPSNFFLNKNMEVKIGDLGLAARVGPAGRCHRVLCGTPNFQ APEVVSRNGHSAKSDIWALGCIMYTVLTGTPPFAAAPLSEMYQNIRDGHYLEPTQLSPSARSLI ARLLAPDPDERPSLDHLLQDDFFSQGFTPERLPPHSCHSPPVFAFPPPLGRLFRKVGQLLLTQC RPPCPFTSKEASGPGEESTEPDHMEASNEEGAPLCTESRIHLLTLGTPRTDPADAKGTLALQLE VATRKLCLCLDAGPVGRTATPKCRTEAAWRGPKPAGQDPPGEQRSVLWAPKWVDYSLKYGFGYQ LSDGGSGVLFRDGSHMALRPPGGHVSYQPDQGTLWIFALRDVPGPLRAKLAVLRLFACYMQRRL REEGTAPMTATPASPDFCLLSFTADAQALAMLFSNGTVQVPILRVTTGAHLDLGLSPRSVPKPP QSSWC hide sequence

Ensembl Acc Id:

ENSRNOP00000051194 ⟸ ENSRNOT00000042204

RefSeq Acc Id:	XP_038934931 ⟸ XM_039079003
- Peptide Label:	isoform X8
- UniProtKB:	A6K8L8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038934933 ⟸ XM_039079005
- Peptide Label:	isoform X10

RefSeq Acc Id:	XP_063119487 ⟸ XM_063263417
- Peptide Label:	isoform X6
- UniProtKB:	A6K8L7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063119488 ⟸ XM_063263418
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_063119489 ⟸ XM_063263419
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063119490 ⟸ XM_063263420
- Peptide Label:	isoform X12

Ensembl Acc Id:

ENSRNOP00000100195 ⟸ ENSRNOT00000146724

Ensembl Acc Id:

ENSRNOP00000101491 ⟸ ENSRNOT00000153750

Ensembl Acc Id:

ENSRNOP00000107666 ⟸ ENSRNOT00000158969

Protein Domains

POLO box Protein kinase

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D3ZY07-F1-model_v2	AlphaFold	D3ZY07	1-595	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695020

Promoter ID:

EPDNEW_R5545

Type:

single initiation site

Name:

Plk5_1

Description:

polo-like kinase 5

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	12,221,301 - 12,221,361	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1305038	AgrOrtholog
BioCyc Gene	G2FUF-34939	BioCyc
Ensembl Genes	ENSRNOG00000034102	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000042204	ENTREZGENE
	ENSRNOT00000042204.6	UniProtKB/TrEMBL
	ENSRNOT00000146724	ENTREZGENE
	ENSRNOT00000146724.1	UniProtKB/TrEMBL
	ENSRNOT00000153750.1	UniProtKB/TrEMBL
	ENSRNOT00000158969	ENTREZGENE
	ENSRNOT00000158969.1	UniProtKB/TrEMBL
Gene3D-CATH	3.30.1120.30	UniProtKB/TrEMBL
	Phosphorylase Kinase, domain 1	UniProtKB/TrEMBL
	Transferase(Phosphotransferase) domain 1	UniProtKB/TrEMBL
InterPro	Kinase-like_dom	UniProtKB/TrEMBL
	POLO_box_1	UniProtKB/TrEMBL
	POLO_box_dom_sf	UniProtKB/TrEMBL
	POLO_box_duplicated_dom	UniProtKB/TrEMBL
	Prot_kinase_cat_dom	UniProtKB/TrEMBL
	Protein_kinase_ATP_BS	UniProtKB/TrEMBL
	Ser/Thr_prot_kinase_AS	UniProtKB/TrEMBL
KEGG Report	rno:314627	UniProtKB/TrEMBL
NCBI Gene	314627	ENTREZGENE
PANTHER	INACTIVE SERINE/THREONINE-PROTEIN KINASE PLK5	UniProtKB/TrEMBL
	SERINE/THREONINE-PROTEIN KINASE PLK	UniProtKB/TrEMBL
Pfam	Pkinase	UniProtKB/TrEMBL
	POLO_box	UniProtKB/TrEMBL
PhenoGen	Plk5	PhenoGen
PROSITE	POLO_BOX	UniProtKB/TrEMBL
	PROTEIN_KINASE_ATP	UniProtKB/TrEMBL
	PROTEIN_KINASE_DOM	UniProtKB/TrEMBL
	PROTEIN_KINASE_ST	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000034102	RatGTEx
SMART	S_TKc	UniProtKB/TrEMBL
Superfamily-SCOP	Kinase_like	UniProtKB/TrEMBL
	Polo-box domain	UniProtKB/TrEMBL
UniProt	A0ABK0L0P7_RAT	UniProtKB/TrEMBL
	A0ABK0L746_RAT	UniProtKB/TrEMBL
	A0ABK0LYR2_RAT	UniProtKB/TrEMBL
	A6K8L7	ENTREZGENE, UniProtKB/TrEMBL
	A6K8L8	ENTREZGENE, UniProtKB/TrEMBL
	D3ZY07	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2009-12-23	Plk5	polo-like kinase 5	Plk5p	polo-like kinase 5 pseudogene	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2009-06-12	Plk5p	polo-like kinase 5 pseudogene	RGD1305038	similar to Serine/threonine-protein kinase SNK (Serum inducible kinase)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-04-30	RGD1305038	similar to Serine/threonine-protein kinase SNK (Serum inducible kinase)	RGD1305038_predicted	similar to Serine/threonine-protein kinase SNK (Serum inducible kinase) (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-20	RGD1305038_predicted	similar to Serine/threonine-protein kinase SNK (Serum inducible kinase) (predicted)	LOC314627_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC314627_predicted	similar to Serine/threonine-protein kinase SNK (Serum inducible kinase) (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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