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Gene: Atf7 (activating transcription factor 7) Rattus norvegicus

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Symbol:

Atf7

Name:

activating transcription factor 7

RGD ID:

1304940

Description:

Predicted to enable several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; cAMP response element binding activity; and transcription coactivator binding activity. Predicted to be involved in several processes, including hepatocyte apoptotic process; p38MAPK cascade; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Predicted to be part of RNA polymerase II transcription regulator complex. Orthologous to human ATF7 (activating transcription factor 7); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; amphetamine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cyclic AMP-dependent transcription factor ATF-7; LOC315333

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ATF7 (activating transcription factor 7)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, Panther
Mus musculus (house mouse):	Atf7 (activating transcription factor 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Atf7 (activating transcription factor 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	LOC100981854 (cyclic AMP-dependent transcription factor ATF-7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	LOC607149 (cyclic AMP-dependent transcription factor ATF-7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	LOC101960773 (cyclic AMP-dependent transcription factor ATF-7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ATF7 (activating transcription factor 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LOC103238406 (cyclic AMP-dependent transcription factor ATF-7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Atf7 (activating transcription factor 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	NPFF (neuropeptide FF-amide peptide precursor)	HGNC	OrthoDB
Homo sapiens (human):	ATF7-NPFF (ATF7-NPFF readthrough)	HGNC	EggNOG
Alliance orthologs ³
Homo sapiens (human):	ATF7 (activating transcription factor 7)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Atf7 (activating transcription factor 7)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	atf7a (activating transcription factor 7a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	atf7a (activating transcription factor 7a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	atf7b (activating transcription factor 7b)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Danio rerio (zebrafish):	atf7b (activating transcription factor 7b)	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER\|PhylomeDB)
Drosophila melanogaster (fruit fly):	Atf-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	Atf-2	Alliance	DIOPT (InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	ACA1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	ACA1	Alliance	DIOPT (Ensembl Compara\|OrthoInspector\|PANTHER)
Caenorhabditis elegans (roundworm):	atf-7	Alliance	DIOPT (Ensembl Compara\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	SKO1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|OrthoFinder\|PANTHER)
Saccharomyces cerevisiae (baker's yeast):	SKO1	Alliance	DIOPT (Ensembl Compara\|OrthoFinder\|PANTHER)
Xenopus tropicalis (tropical clawed frog):	atf7	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	atf7	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	135,537,351 - 135,649,188 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	135,542,111 - 135,599,899 (-)	Ensembl				GRCr8
mRatBN7.2	7	133,660,491 - 133,750,902 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	133,663,294 - 133,750,848 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	135,419,512 - 135,506,589 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	137,648,883 - 137,735,950 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	137,635,114 - 137,722,181 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	144,131,382 - 144,223,463 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	144,136,325 - 144,223,429 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	141,923,377 - 142,016,052 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	141,283,187 - 141,372,637 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	130,091,319 - 130,178,104 (-)	NCBI		Celera
RGSC_v3.1	7	141,351,602 - 141,448,693 (-)	NCBI
Cytogenetic Map	7	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

colorectal cancer (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2,3',4,4',5-Pentachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2-hydroxypropanoic acid (ISO)

3,4-methylenedioxymethamphetamine (ISO)

amphetamine (EXP)

baicalein (EXP)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium atom (ISO)

cadmium dichloride (ISO)

caffeine (ISO)

carbon nanotube (ISO)

cocaine (ISO)

coumarin (ISO)

cyclosporin A (ISO)

dicrotophos (ISO)

doxorubicin (ISO)

enzyme inhibitor (ISO)

folic acid (ISO)

FR900359 (ISO)

gentamycin (EXP)

hexadecanoic acid (ISO)

lead diacetate (ISO)

N-methyl-4-phenylpyridinium (EXP)

nickel atom (ISO)

paracetamol (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

Soman (EXP)

tetrachloromethane (EXP)

titanium dioxide (ISO)

trichostatin A (ISO)

triptonide (ISO)

tris(2-butoxyethyl) phosphate (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

heart development (ISO)

hematopoietic progenitor cell differentiation (ISO)

hepatocyte apoptotic process (ISO)

in utero embryonic development (ISO)

liver development (ISO)

negative regulation of transcription by RNA polymerase II (ISO)

p38MAPK cascade (ISO)

positive regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of DNA-templated transcription (IEA,ISO)

regulation of transcription by RNA polymerase II (IBA)

Cellular Component

nucleus (IEA,ISO)

RNA polymerase II transcription regulator complex (IEA,ISO)

Molecular Function

cAMP response element binding (IBA)

DNA binding (IEA)

DNA-binding transcription factor activity (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IBA)

DNA-binding transcription repressor activity, RNA polymerase II-specific (ISO)

enzyme binding (IEA,ISO)

mitogen-activated protein kinase binding (IEA,ISO)

protein binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA,ISO)

sequence-specific double-stranded DNA binding (IEA,ISO)

transcription coactivator binding (IEA,ISO)

zinc ion binding (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Expression of activating transcription factor 7 is correlated with prognosis of colorectal cancer.	Guo HQ, etal., J Cancer Res Ther. 2015 Apr-Jun;11(2):319-23. doi: 10.4103/0973-1482.148688.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	GOA pipeline	RGD automated data pipeline
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8288576	PMID:10376527	PMID:12477932	PMID:17264123	PMID:23382074

Genomics

Comparative Map Data

Atf7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	135,537,351 - 135,649,188 (-)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	7	135,542,111 - 135,599,899 (-)	Ensembl				GRCr8
mRatBN7.2	7	133,660,491 - 133,750,902 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	133,663,294 - 133,750,848 (-)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	7	135,419,512 - 135,506,589 (-)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	137,648,883 - 137,735,950 (-)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	137,635,114 - 137,722,181 (-)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	144,131,382 - 144,223,463 (-)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	144,136,325 - 144,223,429 (-)	Ensembl			rn6	Rnor6.0
Rnor_5.0	7	141,923,377 - 142,016,052 (-)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	7	141,283,187 - 141,372,637 (-)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	7	130,091,319 - 130,178,104 (-)	NCBI		Celera
RGSC_v3.1	7	141,351,602 - 141,448,693 (-)	NCBI
Cytogenetic Map	7	q36	NCBI

ATF7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	53,507,856 - 53,626,382 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	53,507,856 - 53,626,410 (-)	Ensembl			hg38	GRCh38
GRCh37	12	53,901,640 - 54,020,166 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	52,196,026 - 52,306,403 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Build 34	12	52,196,027 - 52,306,405	NCBI
Celera	12	53,556,201 - 53,670,237 (-)	NCBI		Celera
Cytogenetic Map	12	q13.13	NCBI
HuRef	12	50,941,222 - 51,059,806 (-)	NCBI		HuRef
CHM1_1	12	53,868,696 - 53,987,260 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	53,473,861 - 53,592,424 (-)	NCBI		T2T-CHM13v2.0

Atf7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	102,434,381 - 102,533,899 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	102,434,381 - 102,533,899 (-)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	15	102,525,946 - 102,625,464 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	102,525,946 - 102,625,464 (-)	Ensembl			mm10	GRCm38
MGSCv37	15	102,367,074 - 102,455,852 (-)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	15	102,364,677 - 102,453,455 (-)	NCBI		MGSCv36	mm8
Celera	15	104,694,388 - 104,783,409 (-)	NCBI		Celera
Cytogenetic Map	15	F3	NCBI
cM Map	15	57.66	NCBI

Atf7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	803,738 - 898,967 (-)	Ensembl
ChiLan1.0	NW_004955458	803,738 - 898,847 (-)	NCBI	ChiLan1.0	ChiLan1.0

LOC100981854
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	40,559,286 - 40,676,753 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	40,556,050 - 40,673,517 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	35,128,031 - 35,245,505 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	35,914,378 - 36,026,225 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	35,914,378 - 36,021,141 (+)	Ensembl			panPan2	panpan1.1

LOC607149
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	1,617,466 - 1,711,356 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	1,617,289 - 1,706,637 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	44,543,239 - 44,632,547 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	1,621,590 - 1,710,939 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	1,621,533 - 1,710,913 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	1,638,801 - 1,728,103 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	1,621,077 - 1,711,380 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	44,944,942 - 45,034,279 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

LOC101960773
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	62,279,991 - 62,381,384 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936512	10,785,763 - 10,884,795 (-)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936512	10,780,826 - 10,884,806 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ATF7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	18,728,694 - 18,838,542 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	5	18,726,329 - 18,838,670 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	19,164,389 - 19,285,213 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103238406
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	49,608,653 - 49,728,702 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	49,618,136 - 49,728,289 (-)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666037	196,321,751 - 196,441,009 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Atf7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624904	1,613,487 - 1,706,549 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624904	1,604,083 - 1,705,739 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	342
Count of miRNA genes:	200
Interacting mature miRNAs:	223
Transcripts:	ENSRNOT00000020527
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354582	Stl11	Serum triglyceride level QTL 11	3.42		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	121393075	137014596	Rat
634331	Pia17	Pristane induced arthritis QTL 17	4.7		joint integrity trait (VT:0010548)	arthritic paw count (CMO:0001460)	7	132099939	137014596	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	98549867	137014596	Rat
1300112	Bp183	Blood pressure QTL 183	3.51		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	119280025	135560836	Rat
61428	Scl3	Serum cholesterol level QTL 3	3.2		blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	7	100548246	137014596	Rat
61397	Bw17	Body weight QTL 17	6.3		body mass (VT:0001259)	body weight (CMO:0000012)	7	95485047	137014596	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	115313999	136544683	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	92362341	137014596	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	71827901	136544683	Rat
1357339	Stl14	Serum triglyceride level QTL 14	3.45	0.0001	blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	135371291	137014596	Rat

Markers in Region

D7Mit20

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,749,048 - 133,749,134 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,221,626 - 144,221,711	NCBI	Rnor6.0
Rnor_5.0	7	142,014,215 - 142,014,300	UniSTS	Rnor5.0
RGSC_v3.4	7	141,370,833 - 141,370,919	RGD	RGSC3.4
RGSC_v3.4	7	141,370,834 - 141,370,919	UniSTS	RGSC3.4
Celera	7	130,176,301 - 130,176,386	UniSTS
RGSC_v3.1	7	141,447,270 - 141,447,356	RGD
Cytogenetic Map	7	q36	UniSTS

D7Rat80

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	7	135,560,615 - 135,560,836 (+)	Marker Load Pipeline
mRatBN7.2	7	133,682,097 - 133,682,318 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,154,650 - 144,154,870	NCBI	Rnor6.0
Rnor_5.0	7	141,946,645 - 141,946,865	UniSTS	Rnor5.0
RGSC_v3.4	7	141,301,528 - 141,301,748	UniSTS	RGSC3.4
RGSC_v3.4	7	141,301,527 - 141,301,748	RGD	RGSC3.4
Celera	7	130,109,659 - 130,109,869	UniSTS
RGSC_v3.1	7	141,377,965 - 141,378,185	RGD
RH 3.4 Map	7	1060.0	RGD
RH 3.4 Map	7	1060.0	UniSTS
SHRSP x BN Map	7	88.5699	RGD
SHRSP x BN Map	7	88.5699	UniSTS
Cytogenetic Map	7	q36	UniSTS

BE096030

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,661,848 - 133,662,027 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,134,403 - 144,134,581	NCBI	Rnor6.0
Rnor_5.0	7	141,926,398 - 141,926,576	UniSTS	Rnor5.0
RGSC_v3.4	7	141,281,280 - 141,281,458	UniSTS	RGSC3.4
Celera	7	130,089,413 - 130,089,591	UniSTS
RH 3.4 Map	7	1063.0	UniSTS
Cytogenetic Map	7	q36	UniSTS

RH143199

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,661,857 - 133,662,001 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,134,412 - 144,134,555	NCBI	Rnor6.0
Rnor_5.0	7	141,926,407 - 141,926,550	UniSTS	Rnor5.0
RGSC_v3.4	7	141,281,289 - 141,281,432	UniSTS	RGSC3.4
Celera	7	130,089,422 - 130,089,565	UniSTS
RH 3.4 Map	7	1064.0	UniSTS
Cytogenetic Map	7	q36	UniSTS

AW530091

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,660,824 - 133,660,977 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,133,379 - 144,133,531	NCBI	Rnor6.0
Rnor_5.0	7	141,925,374 - 141,925,526	UniSTS	Rnor5.0
RGSC_v3.4	7	141,280,255 - 141,280,407	UniSTS	RGSC3.4
Celera	7	130,088,389 - 130,088,541	UniSTS
RH 3.4 Map	7	1131.02	UniSTS
Cytogenetic Map	7	q36	UniSTS

BE104942

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,748,100 - 133,748,251 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,220,678 - 144,220,828	NCBI	Rnor6.0
Rnor_5.0	7	142,013,267 - 142,013,417	UniSTS	Rnor5.0
RGSC_v3.4	7	141,369,886 - 141,370,036	UniSTS	RGSC3.4
Celera	7	130,175,353 - 130,175,503	UniSTS
RH 3.4 Map	7	1060.0	UniSTS
Cytogenetic Map	7	q36	UniSTS

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	165	91	90	59	92	59	6	356	192	11	144	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001108115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC109743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000020527 ⟹ ENSRNOP00000020527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,542,111 - 135,599,899 (-)	Ensembl
mRatBN7.2 Ensembl	7	133,663,294 - 133,750,848 (-)	Ensembl
Rnor_6.0 Ensembl	7	144,136,325 - 144,223,429 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100308 ⟹ ENSRNOP00000077316

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,542,812 - 135,599,886 (-)	Ensembl
mRatBN7.2 Ensembl	7	133,668,150 - 133,750,481 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106850 ⟹ ENSRNOP00000085221

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	7	135,542,291 - 135,599,886 (-)	Ensembl
mRatBN7.2 Ensembl	7	133,663,294 - 133,688,345 (-)	Ensembl

RefSeq Acc Id:

NM_001108115 ⟹ NP_001101585

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,542,276 - 135,629,359 (-)	NCBI
mRatBN7.2	7	133,663,756 - 133,750,852 (-)	NCBI
Rnor_6.0	7	144,136,310 - 144,223,429 (-)	NCBI
Rnor_5.0	7	141,923,377 - 142,016,052 (-)	NCBI
RGSC_v3.4	7	141,283,187 - 141,372,637 (-)	RGD
Celera	7	130,091,319 - 130,178,104 (-)	RGD

Sequence:

show sequence

AAGTATCTGCTCCGCTGAGGGGGGAAAGGAGGAGCAGGAGACAGATTGTGGGACCGAGCGCGGG
CGGGCGGGAGGCGCCGGAGCTACCAGCGGCTCTGCTCTGCTTTATGAAATATGGGAGACGACAG
ACCGTTTGTGTGCAGTGCCCCAGGCTGTGGACAGAGATTTACAAATGAGGACCACCTGGCAGTT
CATAAACATAAGCATGAGATGACCCTGAAGTTCGGCCCGGCCCGGACGGACTCTGTCATCATTG
CAGATCAAACACCTACTCCAACAAGATTCCTGAAGAACTGTGAGGAGGTGGGGCTCTTCAATGA
ATTAGCTAGTTCCTTTGAACATGAATTTAAGAAAGCTTCTGATGATGATGAAAAAAAGGCAAGT
AGTGCTGCTGGGCCTCTAGACATGTCTCTGCCTTCTACACCAGACATCAAAGTCAAGGAGGAAG
AGCCAGTGGAGGTGGACTCATCACCCCCCGACAGTCCTGCTTCCTGCCCCTGCTCCCCGCCACT
GAAAGACAAGGAAGTTGCCACAAAACCTGTTGTGATCTCTACCCCTACACCCACCATCGTACGT
CCTGGCTCCCTGCCTCTGCACTTAGGTTATGATCCACTTCATCCAACTCTTCCTTCCCCAACCT
CTGTCATCACACAGGCTCCACCATCCAACAGGCAAATAGGATCTCCTACTGGCTCCCTCCCTCT
CGTCATGCATCTTGCTAATGGACAGACCATGCCAATGCTGCCAGGGCCTCCAGTACAGATGCCT
TCTGTTATTTCGCTGGCCAGACCTGTTTCCATGGTGCCCAACATTCCTGGTATACCTGGCCCAC
CAGTTAACAATAGTGGCTCTATTTCTCCCTCTGGCCACCCTATGCCGTCAGAAGCCAAAATGAG
ACTAAAAGCCACATTGACCCACCAAGTTTCTTCAATCAATGGAGGTTGTGGAATGGTGGTAGGC
ACTGCAAGCACCATGGTGACAGCCCGTCCAGAGCAGAACCAGATCCTCATCCAGCACCCGGATG
CCCCATCCCCTGCCCAGCCACAGGTGTCTCCAGCTCAGCCCACCCCTAGCACAGGGGGACGGCG
TCGGCGCACAGTGGATGAAGATCCAGATGAGCGGCGGCAGCGATTTTTAGAGCGGAACAGAGCT
GCAGCCTCCCGATGCCGCCAAAAGCGAAAGCTGTGGGTCTCCTCCCTGGAAAAGAAGGCAGAAG
AACTTACTTCTCAGAACATTCAGCTGAGTAATGAAGTCACATTACTACGCAATGAGGTGGCTCA
GTTGAAACAGCTACTGTTAGCTCATAAAGACTGCCCAGTCACTGCACTACAGAAAAAGACTCAA
GGCTACCTAGAAAGTCCCAAGGAAAGCTCAGAGCCAACGGGTTCTCCAGCCCCAGTGATTCAGC
ACAGTTCCGCAACAGCCCCTAGCAATGGCCTTAGTGTTCGATCTGCAGCTGAAGCTGTGGCCAC
CTCGGTCCTCACTCAGATGGCCAGCCAAAGGACAGAACTGAGCATGCCCATACAGTCACATGTG
ATCATGACCCCACAGTCACAGTCTGCGGGCAGATGATGCCTCCCATGATGGAGAGGTCCCCAGC
CAGAGCTCGCCAGCCTGAGCCAAAAGAGAGATCAACTTATCCCTCCTGTCTGCCTTGGAATTGG
CAGTATGGAGAGGGAGAAATTGTGTGTTGTGAGTATGGACAGATGTGGGGCTTTTCTCTTTAGC
CACATGATCATGTACAATTAACACCTGTACAACGGGCTTTTGGCCCCAAAGCCACATAGATCAT
CCCCCAAGGGTAGGGTTTCTTATGATCCTACAACCAAAGGCCTTTCCACATGGTCTGAGCAATC
ACCCCAGCCCTGATGCATGTGTGCCTCTCTTAACACTAACCCTTGCACTTGTAGGTTTGGGGTT
TCTCAGTGTCCTCTCCTCCCCTTGAGCTGTGGCTGATACCTTCTTATCTCTTACTAGCATGCCA
CTTCCTGCCAGATAGAGGGAGACGAGATTTGATGGCGTGTTACTTGCTGTCCCATCCCCAGCCA
CCCCATGCACTCAGGACTTTGTCCCCAACAGCTGCTTATTTGTCTCTTCCCCTTCTAAGCGACA
GTGAAAACACTCACTTGTTGAGAATGTAATGCATTTAATGTGTGAGGTAGCAGTGCTTCCCGCC
TCTTCCCTGGGCTCTACTCCTGTCTGCTACCAAAAACAAACACAGACAGAAAAAGCAAAACT

hide sequence

RefSeq Acc Id:

XM_006242396 ⟹ XP_006242458

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,537,351 - 135,629,420 (-)	NCBI
mRatBN7.2	7	133,664,291 - 133,750,902 (-)	NCBI
Rnor_6.0	7	144,131,382 - 144,223,463 (-)	NCBI
Rnor_5.0	7	141,923,377 - 142,016,052 (-)	NCBI

Sequence:

show sequence

GCGAGAAGTGAACACGCCTGGCCGGACGGGAGGAAAGTATCTGCTCCGCTGAGGGGGGAAAGGA
GGAGCAGGAGACAGATTGTGGGACCGAGCGCGGGCGGGCGGGAGGCGCCGGAGCTACCAGCGGC
TCTGCTCTGCTTTATGAAATATGGGAGACGACAGACCGTTTGTGTGCAGTGCCCCAGGCTGTGG
ACAGAGATTTACAAATGAGGACCACCTGGCAGTTCATAAACATAAGCATGAGATGACCCTGAAG
TTCGGCCCGGCCCGGACGGACTCTGTCATCATTGCAGATCAAACACCTACTCCAACAAGATTCC
TGAAGAACTGTGAGGAGGTGGGGCTCTTCAATGAATTAGCTAGTTCCTTTGAACATGAATTTAA
GAAAGCTTCTGATGATGATGAAAAAAAGAGTGCTGCTGGGCCTCTAGACATGTCTCTGCCTTCT
ACACCAGACATCAAAGTCAAGGAGGAAGAGCCAGTGGAGGTGGACTCATCACCCCCCGACAGTC
CTGCTTCCTGCCCCTGCTCCCCGCCACTGAAAGACAAGGAAGTTGCCACAAAACCTGTTGTGAT
CTCTACCCCTACACCCACCATCGTACGTCCTGGCTCCCTGCCTCTGCACTTAGGTTATGATCCA
CTTCATCCAACTCTTCCTTCCCCAACCTCTGTCATCACACAGGCTCCACCATCCAACAGGCAAA
TAGGATCTCCTACTGGCTCCCTCCCTCTCGTCATGCATCTTGCTAATGGACAGACCATGCCAAT
GCTGCCAGGGCCTCCAGTACAGATGCCTTCTGTTATTTCGCTGGCCAGACCTGTTTCCATGGTG
CCCAACATTCCTGGTATACCTGGCCCACCAGTTAACAATAGTGGCTCTATTTCTCCCTCTGGCC
ACCCTATGCCGTCAGAAGCCAAAATGAGACTAAAAGCCACATTGACCCACCAAGTTTCTTCAAT
CAATGGAGGTTGTGGAATGGTGGTAGGCACTGCAAGCACCATGGTGACAGCCCGTCCAGAGCAG
AACCAGATCCTCATCCAGCACCCGGATGCCCCATCCCCTGCCCAGCCACAGGTGTCTCCAGCTC
AGCCCACCCCTAGCACAGGGGGACGGCGTCGGCGCACAGTGGATGAAGATCCAGATGAGCGGCG
GCAGCGATTTTTAGAGCGGAACAGAGCTGCAGCCTCCCGATGCCGCCAAAAGCGAAAGCTGTGG
GTCTCCTCCCTGGAAAAGAAGGCAGAAGAACTTACTTCTCAGAACATTCAGCTGAGTAATGAAG
TCACATTACTACGCAATGAGGTGGCTCAGTTGAAACAGCTACTGTTAGCTCATAAAGACTGCCC
AGTCACTGCACTACAGAAAAAGACTCAAGGCTACCTAGAAAGTCCCAAGGAAAGCTCAGAGCCA
ACGGGTTCTCCAGCCCCAGTGATTCAGCACAGTTCCGCAACAGCCCCTAGCAATGGCCTTAGTG
TTCGATCTGCAGCTGAAGCTGTGGCCACCTCGGTCCTCACTCAGATGGCCAGCCAAAGGACAGA
ACTGAGCATGCCCATACAGTCACATGTGATCATGACCCCACAGTCACAGTCTGCGGGCAGATGA
TGCCTCCCATGATGGAGAGGTCCCCAGCCAGAGCTCGCCAGCCTGAGCCAAAAGAGAGATCAAC
TTATCCCTCCTGTCTGCCTTGGAATTGGCAGTATGGAGAGGGAGAAATTGTGTGTTGTGAGTAT
GGACAGATGTGGGGCTTTTCTCTTTAGCCACATGATCATGTACAATTAACACCTGTACAACGGG
CTTTTGGCCCCAAAGCCACATAGATCATCCCCCAAGGGTAGGGTTTCTTATGATCCTACAACCA
AAGGCCTTTCCACATGGTCTGAGCAATCACCCCAGCCCTGATGCATGTGTGCCTCTCTTAACAC
TAACCCTTGCACTTGTAGGTTTGGGGTTTCTCAGTGTCCTCTCCTCCCCTTGAGCTGTGGCTGA
TACCTTCTTATCTCTTACTAGCATGCCACTTCCTGCCAGATAGAGGGAGACGAGATTTGATGGC
GTGTTACTTGCTGTCCCATCCCCAGCCACCCCATGCACTCAGGACTTTGTCCCCAACAGCTGCT
TATTTGTCTCTTCCCCTTCTAAGCGACAGTGAAAACACTCACTTGTTGAGAATGTAATGCATTT
AATGTGTGAGGTAGCAGTGCTTCCCGCCTCTTCCCTGGGCTCTACTCCTGTCTGCTACCAAAAA
CAAACACAGACAGAAAAAGCAAAACTCTGAGAGTTTGAATCATTTTTCAGTTCCAAATCTATCG
GTACCTCATTTCGTCTCTTGACTTTCCTTAGTCTAGTGGTGGGGTCTTTCCTACTTCCCCACTC
TGCCTTGGAAACCTCATCTTGTGGCCTTATTGTTAGTGGCAATGAAAAGGGAGAGAGCCGGGGA
TCTAACTGGGCCTCCCTGTCTCCTTCCCTACCCTCCAGTTCTAATCATCAGGGCAGACAGGAAC
AGTGTAACTTAAACTTGTTCCATCAGGTTACTGGATTAACTGATTCTTTTATGTTTTACAAGAG
TTTACTGGCCAAAGTCTACATATTGTCATCTTTGGTCACCTGTGCTCCTGCCTCTCCACCCTGC
TTCCCTGTCCATGTCACTGCCTGTTTCCACTAGAATTTCTTTAGCTCAGCCCTCCTCAGAGTTG
TCAGACAGAAGCTGCCTTCATTCTCTGTCCCTCCTGCAGCTCTCAGCCTCCCTTCTTTCCTAAG
GTATGTCTTGTACCCACCAGTGTCCAGCACTCTCCCAGCTACCTTCTCTTTTTTTCACCTGGTT
CTTGGCTGACCCACTAGGTGTCTCTAGTACTGAAATCTTGTTGAACTTGTCCATGGTACAGGCT
CCAGGGCTCTGAAGCATCATGATTGAGATCATGGGTGCTTTTGACGTAAAACTGAGTGGAGATA
GGAGGTGTACATTTTCCTATGTATAATCTCAGCAGAGCACTCAGGATTCAGCCTGTCTGTGAGA
TTGCTGTCTGTGGCTGTTGACTGCCCTTATTTCATGGGTTACAGAGAGAAAGATGTACCCCTCC
TCTTCCTCATCTTTCCTTGGCTCTGAGCTATGCAGGCTCTTCCAGAGCCAGAGGCCTGTGGATA
GATAGGTCAGCTTTAATAGCTCTTGAGTTGAGAATCCTCCCCGTTGTCCTAGAACCACCTTGTG
CCATCTGCTCAAGCCTAGAGTCCTCTTTTCTAGCTCCATCTTAACTATGCAGAATAACTGTTTG
CTTCCTTTTTTTGTCTTCCAAAATTCACTGTCATGGAGGGATGAGGAAATGTTGTAGCTTATAT
GATTATTTCTTCAGTTTAGACTAGTGAACCCATCCTGTGATGTACTTGTATGTTTTATGTAGAT
TTCCCTCCTGTTCTTTAGAGTCAGTGCTGAACAGGCTATACCCAGTAAAAATAGGAGCTGGTTT
TATAGTCTTCTACCACAGGGACTTAGCAGGAACAGCCCCTGAGGTGACCAGGCTAGCAAATGTC
ACAGCAGATGGTTGAGGGCAGGTTACCATCTCCAGGGGTTTCACTTGGCGTTAGAAACTTACAG
CCATAGTTTGAGCTCAGTACTTCTTTAGATGGCTGCTTCCTGGGATTTTTTATTTTTTTTATTT
TTTGTCTTCTTTCCCACTTATGAATTTTGTTTCTTTCTTTCTTTTTTTTTTTTTTTAATTGTCT
TGACTGCCCAGTAGCAGCCTTACACTAAAGCATGGCTGAGCTTAGAGCTCCCAAGGGGTCTTAG
CAGACCCTTAGCTATTTCTCTTCCTCCGTCAGTCAAGTGTCTAAGTCGGGGTAACCTACCAGCC
TGTCCTGGGTCTCATGTCTAGTATATGTGGAGGTTCTTTTCCAGTTTCTTAACCCTCATGTCTG
CTTCTCTTGAGTCTTTGTTTTCTTAGCAGGAACTTAGTACTGGGGACCTGAATGATGCAGGGCA
CCACCAGAACCATCGTAGGAAAGCAGCACTGAAATTAGGCACAGCAGGACAACCCCAGATGCCT
CAGTAGTTGGTTTTCAGTTTCAGAAAGCAAAGCAGCTGCTCATGCTGCAGCTTCCCTTACAGTC
AAGGGAGACGGTACCTGCACTGTCATCACTGTCAGTGGTCACCGCCTTGACCAATGCCTTCCAC
ACTTACCTGAACCAGAACCAGATACTATAGAGGGTATCAATTAACCCTTTTTGACATCTGTGAT
GTGTCATAGAGGGTTCTCTGGTCATGTCTACTTGGGGTTCTATATGCCTCTTGTGTTTGGATGT
CAATTCCTGTCTCTAGGTTTAGGAAATTTTGTGATATAATTTCATTAAATAATTTGACTAATTC
CTTTTGAATTTATCTCAGATTCTCCTTCTTCCCAGTGGGTTCTGAGGTCTTTAAGTATATCCCA
AGCTTCTTGAAAATACTGGTCATGCGCTCTCGCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTCC
CCCCCCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTCTCA
ACTTTGTGCTCCTCTGCAGAACTGCATGGTCTTATCTCTTGGGGAGGCTTTTCACTTGGTTGTT
TCTTTCATGTTAATTTCTGTCTCGTTCCTTTTCCATGTTTGAATGCCCTCACTAAAATCTCCCT
CCATGTATCTGACTTTCTCCTCCAACTTACCTACTGTTTTGTTCATTTAGGAGGTTTTATATAC
AGTCCCTAGTTCACTCATGTGTATTTGAGACTTCTACTCTGAATTCTTTCTCAGACATCTCAGT
ACCTTTGGTTTTCATTAGGAGAGGTTTGTAGTGTGTCCTGGTCCGCTGTTGGCCCATGTTCTTT
GTCCTTCTCTATGGTGTTTTGTACATCAGTCAGGATGGATATGTCCTCCAGTTTTAACTCTTCT
TCCCCAACTCTGTTTTGTTTTATGTAATTGAGCCCTTCTTCAGAGCTCTATCAGGAAGGAGCTG
AGAGCGATGTCTTAGACCCATGAGTGGTCAGAGGCCTGGTCTGTGCTCTTACCGCCCACTCCAT
ATAACACAGAGTGTTCAGAGTTCCAGTGCCAGGAAGCCTCCCAAAACACAGGGAGAGCTAGAAA
GGACATGGCTCCTTCACTCCCTTCCTGTTGGCTGAATACGCCAAATCTGTCCACCTCTTTCCTC
CACTCCTGTCCATGGTTATAAACAGCAGACCACATATTAAAGGGAGCTGTGCTGGTGAACCTTG
CCTCCTGCCTGCCTTTCCTCTCCCATCTCCTCAGGGACCTGCCCTCCAGTACAGTCATCCTGAG
AGATATAACTATACTTTTTACAGCCTGAACCACCAAAGAGACACAACACACAATTCTTCCTCTG
GCTTCTGAGAGGCTCCTTAAAGGTGCTAACTCCTGAGATCACTCTCCCCAGTGTGTCCCCTTTC
ATAACTGTCTTCCCATCCTCAGAACACATTTCCAATAATATTATCGATTGTACCCACCAAAAAG
AAATATGTACTTCTTTTGAAAAGAAAATGGTAGTCTGTCTAGACTCATCTTGCAGCTATGCCAC
ACAGGCCTTTGTTGATGTGCTTTCTCCTCTTTAGACATGTTTGACCAGGGTGGGAGCTGTGGTA
GGATAGGACTGGTGAGGATCCTAAGACCTATCAGAAGACCCCACCCCACTCCAGTCCAACTAGA
CATTCTTCCTACAGAGTCTGTTTCTGTCTATATACATGCACATGCACATGCACATGCACAGACA
AATCTCCTACTCCACCAGAGTGGTGACCACAGGAATGAGCTCAGTGCTTGCTGGCCACATCCCC
ACCTTCTGCACCTTTAAGGTAAAATCCTACGCTAGAATGAACAAAGGCTTGTGAAAGTAGGGCA
GATTAAGGCAGCTTATATCCTTGTAGGTGCAAGTTTCTATTTCAGCTACTAGATGTTTTGGTTT
TGTTTTGTTTTTTAGAGCTGGTAGGCTATAAGCCAGCTATAAGGCATTAGTTGTTAAGTAGCTG
TGAGCACTGTTTCCTTGACTTCACCTTAGGGCAGTTGCTTTCAGAACATGGTCCAGGAGCAACA
GTAGCAGCAACATCACCTAGAGAGCTTGCTAGAAATGCACACTCTTTGTCATCCCAACCTCCTG
AGTTGGCCACTCTGAAGGTGAGCTTTAACTAGCAGTCTCTGCTGCTGGTCCATACTAATGTGTG
AGCATCCCTAGAAGACAGACTGGGAACATCTTAGCTCTGTGGTGACACGGATTACTTTAAATGC
CTTTTCTGCCTTAGAAATGATGTTTTCCCTTCCCTCCACTTCCATTAAAACAGCCACCAACAAT
ATCACTCACCTCAAATTTTTGGTCTTCCTTCTAGTCTTAAGCTCTAAAACATTTGCCTGTATTG
GTCTGGGCAGAACTTACTCTTATTTCCTTGCAGGCTACTAGTTGTGCATTCTTGGTGACATTAA
CCAGCAGGAAGGCCAGGAGTGGTGGTGGCCCAAGCCTTTGATCCCAGCACTTGTGAGGGAAGTG
AGGGAAGCAGATCTCTTTGTGGTCAAGACCAGCCTGGTCTACAGAGGGAGTTCAAAGCCAATCA
TAGCTATGCACTGAGATCCTGTCTCAAAACAAACAAAATCAGCAGAGCCTTAGTTGTCCATTCT
TTCCTCTGCGCGCGCGCGCACACGCACACGCACACACACACACACACACACACACACACACATC
TCTTGCAGGAAGATTAGCCTCCAACCCAACAGTGGAGCCTTCTGCATCCTGATAGAGTGTATGT
TGAGAAGAAAGCCATGTGTATCTATGAATATATCTCTCCTGTATCCTTTGACTTGTAGCAATAC
CTCTCCATCCTCAAGGAGCTCAACCTAGGCTGGGTCTCCCCAGGCCCCAGTGGTAGACTCTGAT
GGGTGGGAGGATACAGTGCTCTGGGCTGTTTTGTTACAAAAGTGTCTTCTGTCCTTTCCCCCCA
CCCAATTCAGCATGAACCCTGTGAGCAGGCTCTCACAATCTCCTGGGGCGGGGCTGAGGCAGGG
GCTTTCAGCTCTTCTCCATAACCATCCCTTCTTCCTTCCCCCATGCCATTTAGCAGTTATCACC
CAGCCTTGCCTTCTCCCTCCATCCTTTGCCCTGACATATACTGTGCCTTATTTATGCTGCAAAT
ATAACATTAAACTATCAAGAGAATCA

hide sequence

RefSeq Acc Id:

XM_008765747 ⟹ XP_008763969

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,537,351 - 135,629,362 (-)	NCBI
mRatBN7.2	7	133,660,491 - 133,750,870 (-)	NCBI
Rnor_6.0	7	144,131,382 - 144,223,463 (-)	NCBI

Sequence:

show sequence

GCGAGAAGTGAACACGCCTGGCCGGACGGGAGGAAAGTATCTGCTCCGCTGAGGGGGGAAAGGA
GGAGCAGGAGACAGATTGTGGGACCGAGCGCGGGCGGGCGGGAGGCGCCGGAGCTACCAGCGGG
TGAGTCCTGTTAACATTAGCTAGTCCGTGGCCTGACAGGAGTCTCCCCTTCTACTCTGGCCAGT
CCCAGCGTCCCGGGCCGGGGTCTCCCCTCCCAGTCTGTTGGACGGGGGCGCTGAGGCGGTGGCC
AGGCCTGTCTGAGGAAGAGGGTGGGGCATAGGCTAAAGACAACCAATAGGAGAGAAGGAAGCCA
CAATTGGCGGCCATGAGCGCTAATGGGAGATCGCCTTTACCTTGCGGAGTGCCGCCCTCTTCTC
TTCTCCCGCCTCCTTCCTTTTGGAGGAAGGCGGGGCCAGAGGACTGAAGTGTGGGGAGAACTTG
GGCTCTGCTCTGCTTTATGAAATATGGGAGACGACAGACCGTTTGTGTGCAGTGCCCCAGGCTG
TGGACAGAGATTTACAAATGAGGACCACCTGGCAGTTCATAAACATAAGCATGAGATGACCCTG
AAGTTCGGCCCGGCCCGGACGGACTCTGTCATCATTGCAGATCAAACACCTACTCCAACAAGAT
TCCTGAAGAACTGTGAGGAGGTGGGGCTCTTCAATGAATTAGCTAGTTCCTTTGAACATGAATT
TAAGAAAGCTTCTGATGATGATGAAAAAAAGAGTGCTGCTGGGCCTCTAGACATGTCTCTGCCT
TCTACACCAGACATCAAAGTCAAGGAGGAAGAGCCAGTGGAGGTGGACTCATCACCCCCCGACA
GTCCTGCTTCCTGCCCCTGCTCCCCGCCACTGAAAGACAAGGAAGTTGCCACAAAACCTGTTGT
GATCTCTACCCCTACACCCACCATCGTACGTCCTGGCTCCCTGCCTCTGCACTTAGGTTATGAT
CCACTTCATCCAACTCTTCCTTCCCCAACCTCTGTCATCACACAGGCTCCACCATCCAACAGGC
AAATAGGATCTCCTACTGGCTCCCTCCCTCTCGTCATGCATCTTGCTAATGGACAGACCATGCC
AATGCTGCCAGGGCCTCCAGTACAGATGCCTTCTGTTATTTCGCTGGCCAGACCTGTTTCCATG
GTGCCCAACATTCCTGGTATACCTGGCCCACCAGTTAACAATAGTGGCTCTATTTCTCCCTCTG
GCCACCCTATGCCGTCAGAAGCCAAAATGAGACTAAAAGCCACATTGACCCACCAAGTTTCTTC
AATCAATGGAGGTTGTGGAATGGTGGTAGGCACTGCAAGCACCATGGTGACAGCCCGTCCAGAG
CAGAACCAGATCCTCATCCAGCACCCGGATGCCCCATCCCCTGCCCAGCCACAGGTGTCTCCAG
CTCAGCCCACCCCTAGCACAGGGGGACGGCGTCGGCGCACAGTGGATGAAGATCCAGATGAGCG
GCGGCAGCGATTTTTAGAGCGGAACAGAGCTGCAGCCTCCCGATGCCGCCAAAAGCGAAAGCTG
TGGGTCTCCTCCCTGGAAAAGAAGGCAGAAGAACTTACTTCTCAGAACATTCAGCTGAGTAATG
AAGTCACATTACTACGCAATGAGGTGGCTCAGTTGAAACAGCTACTGTTAGCTCATAAAGACTG
CCCAGTCACTGCACTACAGAAAAAGACTCAAGGCTACCTAGAAAGTCCCAAGGAAAGCTCAGAG
CCAACGGGTTCTCCAGCCCCAGTGATTCAGCACAGTTCCGCAACAGCCCCTAGCAATGGCCTTA
GTGTTCGATCTGCAGCTGAAGCTGTGGCCACCTCGGTCCTCACTCAGATGGCCAGCCAAAGGAC
AGAACTGAGCATGCCCATACAGTCACATGTGATCATGACCCCACAGTCACAGTCTGCGGGCAGA
TGATGCCTCCCATGATGGAGAGGTCCCCAGCCAGAGCTCGCCAGCCTGAGCCAAAAGAGAGATC
AACTTATCCCTCCTGTCTGCCTTGGAATTGGCAGTATGGAGAGGGAGAAATTGTGTGTTGTGAG
TATGGACAGATGTGGGGCTTTTCTCTTTAGCCACATGATCATGTACAATTAACACCTGTACAAC
GGGCTTTTGGCCCCAAAGCCACATAGATCATCCCCCAAGGGTAGGGTTTCTTATGATCCTACAA
CCAAAGGCCTTTCCACATGGTCTGAGCAATCACCCCAGCCCTGATGCATGTGTGCCTCTCTTAA
CACTAACCCTTGCACTTGTAGGTTTGGGGTTTCTCAGTGTCCTCTCCTCCCCTTGAGCTGTGGC
TGATACCTTCTTATCTCTTACTAGCATGCCACTTCCTGCCAGATAGAGGGAGACGAGATTTGAT
GGCGTGTTACTTGCTGTCCCATCCCCAGCCACCCCATGCACTCAGGACTTTGTCCCCAACAGCT
GCTTATTTGTCTCTTCCCCTTCTAAGCGACAGTGAAAACACTCACTTGTTGAGAATGTAATGCA
TTTAATGTGTGAGGTAGCAGTGCTTCCCGCCTCTTCCCTGGGCTCTACTCCTGTCTGCTACCAA
AAACAAACACAGACAGAAAAAGCAAAACTCTGAGAGTTTGAATCATTTTTCAGTTCCAAATCTA
TCGGTACCTCATTTCGTCTCTTGACTTTCCTTAGTCTAGTGGTGGGGTCTTTCCTACTTCCCCA
CTCTGCCTTGGAAACCTCATCTTGTGGCCTTATTGTTAGTGGCAATGAAAAGGGAGAGAGCCGG
GGATCTAACTGGGCCTCCCTGTCTCCTTCCCTACCCTCCAGTTCTAATCATCAGGGCAGACAGG
AACAGTGTAACTTAAACTTGTTCCATCAGGTTACTGGATTAACTGATTCTTTTATGTTTTACAA
GAGTTTACTGGCCAAAGTCTACATATTGTCATCTTTGGTCACCTGTGCTCCTGCCTCTCCACCC
TGCTTCCCTGTCCATGTCACTGCCTGTTTCCACTAGAATTTCTTTAGCTCAGCCCTCCTCAGAG
TTGTCAGACAGAAGCTGCCTTCATTCTCTGTCCCTCCTGCAGCTCTCAGCCTCCCTTCTTTCCT
AAGGTATGTCTTGTACCCACCAGTGTCCAGCACTCTCCCAGCTACCTTCTCTTTTTTTCACCTG
GTTCTTGGCTGACCCACTAGGTGTCTCTAGTACTGAAATCTTGTTGAACTTGTCCATGGTACAG
GCTCCAGGGCTCTGAAGCATCATGATTGAGATCATGGGTGCTTTTGACGTAAAACTGAGTGGAG
ATAGGAGGTGTACATTTTCCTATGTATAATCTCAGCAGAGCACTCAGGATTCAGCCTGTCTGTG
AGATTGCTGTCTGTGGCTGTTGACTGCCCTTATTTCATGGGTTACAGAGAGAAAGATGTACCCC
TCCTCTTCCTCATCTTTCCTTGGCTCTGAGCTATGCAGGCTCTTCCAGAGCCAGAGGCCTGTGG
ATAGATAGGTCAGCTTTAATAGCTCTTGAGTTGAGAATCCTCCCCGTTGTCCTAGAACCACCTT
GTGCCATCTGCTCAAGCCTAGAGTCCTCTTTTCTAGCTCCATCTTAACTATGCAGAATAACTGT
TTGCTTCCTTTTTTTGTCTTCCAAAATTCACTGTCATGGAGGGATGAGGAAATGTTGTAGCTTA
TATGATTATTTCTTCAGTTTAGACTAGTGAACCCATCCTGTGATGTACTTGTATGTTTTATGTA
GATTTCCCTCCTGTTCTTTAGAGTCAGTGCTGAACAGGCTATACCCAGTAAAAATAGGAGCTGG
TTTTATAGTCTTCTACCACAGGGACTTAGCAGGAACAGCCCCTGAGGTGACCAGGCTAGCAAAT
GTCACAGCAGATGGTTGAGGGCAGGTTACCATCTCCAGGGGTTTCACTTGGCGTTAGAAACTTA
CAGCCATAGTTTGAGCTCAGTACTTCTTTAGATGGCTGCTTCCTGGGATTTTTTATTTTTTTTA
TTTTTTGTCTTCTTTCCCACTTATGAATTTTGTTTCTTTCTTTCTTTTTTTTTTTTTTTAATTG
TCTTGACTGCCCAGTAGCAGCCTTACACTAAAGCATGGCTGAGCTTAGAGCTCCCAAGGGGTCT
TAGCAGACCCTTAGCTATTTCTCTTCCTCCGTCAGTCAAGTGTCTAAGTCGGGGTAACCTACCA
GCCTGTCCTGGGTCTCATGTCTAGTATATGTGGAGGTTCTTTTCCAGTTTCTTAACCCTCATGT
CTGCTTCTCTTGAGTCTTTGTTTTCTTAGCAGGAACTTAGTACTGGGGACCTGAATGATGCAGG
GCACCACCAGAACCATCGTAGGAAAGCAGCACTGAAATTAGGCACAGCAGGACAACCCCAGATG
CCTCAGTAGTTGGTTTTCAGTTTCAGAAAGCAAAGCAGCTGCTCATGCTGCAGCTTCCCTTACA
GTCAAGGGAGACGGTACCTGCACTGTCATCACTGTCAGTGGTCACCGCCTTGACCAATGCCTTC
CACACTTACCTGAACCAGAACCAGATACTATAGAGGGTATCAATTAACCCTTTTTGACATCTGT
GATGTGTCATAGAGGGTTCTCTGGTCATGTCTACTTGGGGTTCTATATGCCTCTTGTGTTTGGA
TGTCAATTCCTGTCTCTAGGTTTAGGAAATTTTGTGATATAATTTCATTAAATAATTTGACTAA
TTCCTTTTGAATTTATCTCAGATTCTCCTTCTTCCCAGTGGGTTCTGAGGTCTTTAAGTATATC
CCAAGCTTCTTGAAAATACTGGTCATGCGCTCTCGCTCTCTCTCTCTCTCTCTCCCTCTCTCCC
TCCCCCCCCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTC
TCAACTTTGTGCTCCTCTGCAGAACTGCATGGTCTTATCTCTTGGGGAGGCTTTTCACTTGGTT
GTTTCTTTCATGTTAATTTCTGTCTCGTTCCTTTTCCATGTTTGAATGCCCTCACTAAAATCTC
CCTCCATGTATCTGACTTTCTCCTCCAACTTACCTACTGTTTTGTTCATTTAGGAGGTTTTATA
TACAGTCCCTAGTTCACTCATGTGTATTTGAGACTTCTACTCTGAATTCTTTCTCAGACATCTC
AGTACCTTTGGTTTTCATTAGGAGAGGTTTGTAGTGTGTCCTGGTCCGCTGTTGGCCCATGTTC
TTTGTCCTTCTCTATGGTGTTTTGTACATCAGTCAGGATGGATATGTCCTCCAGTTTTAACTCT
TCTTCCCCAACTCTGTTTTGTTTTATGTAATTGAGCCCTTCTTCAGAGCTCTATCAGGAAGGAG
CTGAGAGCGATGTCTTAGACCCATGAGTGGTCAGAGGCCTGGTCTGTGCTCTTACCGCCCACTC
CATATAACACAGAGTGTTCAGAGTTCCAGTGCCAGGAAGCCTCCCAAAACACAGGGAGAGCTAG
AAAGGACATGGCTCCTTCACTCCCTTCCTGTTGGCTGAATACGCCAAATCTGTCCACCTCTTTC
CTCCACTCCTGTCCATGGTTATAAACAGCAGACCACATATTAAAGGGAGCTGTGCTGGTGAACC
TTGCCTCCTGCCTGCCTTTCCTCTCCCATCTCCTCAGGGACCTGCCCTCCAGTACAGTCATCCT
GAGAGATATAACTATACTTTTTACAGCCTGAACCACCAAAGAGACACAACACACAATTCTTCCT
CTGGCTTCTGAGAGGCTCCTTAAAGGTGCTAACTCCTGAGATCACTCTCCCCAGTGTGTCCCCT
TTCATAACTGTCTTCCCATCCTCAGAACACATTTCCAATAATATTATCGATTGTACCCACCAAA
AAGAAATATGTACTTCTTTTGAAAAGAAAATGGTAGTCTGTCTAGACTCATCTTGCAGCTATGC
CACACAGGCCTTTGTTGATGTGCTTTCTCCTCTTTAGACATGTTTGACCAGGGTGGGAGCTGTG
GTAGGATAGGACTGGTGAGGATCCTAAGACCTATCAGAAGACCCCACCCCACTCCAGTCCAACT
AGACATTCTTCCTACAGAGTCTGTTTCTGTCTATATACATGCACATGCACATGCACATGCACAG
ACAAATCTCCTACTCCACCAGAGTGGTGACCACAGGAATGAGCTCAGTGCTTGCTGGCCACATC
CCCACCTTCTGCACCTTTAAGGTAAAATCCTACGCTAGAATGAACAAAGGCTTGTGAAAGTAGG
GCAGATTAAGGCAGCTTATATCCTTGTAGGTGCAAGTTTCTATTTCAGCTACTAGATGTTTTGG
TTTTGTTTTGTTTTTTAGAGCTGGTAGGCTATAAGCCAGCTATAAGGCATTAGTTGTTAAGTAG
CTGTGAGCACTGTTTCCTTGACTTCACCTTAGGGCAGTTGCTTTCAGAACATGGTCCAGGAGCA
ACAGTAGCAGCAACATCACCTAGAGAGCTTGCTAGAAATGCACACTCTTTGTCATCCCAACCTC
CTGAGTTGGCCACTCTGAAGGTGAGCTTTAACTAGCAGTCTCTGCTGCTGGTCCATACTAATGT
GTGAGCATCCCTAGAAGACAGACTGGGAACATCTTAGCTCTGTGGTGACACGGATTACTTTAAA
TGCCTTTTCTGCCTTAGAAATGATGTTTTCCCTTCCCTCCACTTCCATTAAAACAGCCACCAAC
AATATCACTCACCTCAAATTTTTGGTCTTCCTTCTAGTCTTAAGCTCTAAAACATTTGCCTGTA
TTGGTCTGGGCAGAACTTACTCTTATTTCCTTGCAGGCTACTAGTTGTGCATTCTTGGTGACAT
TAACCAGCAGGAAGGCCAGGAGTGGTGGTGGCCCAAGCCTTTGATCCCAGCACTTGTGAGGGAA
GTGAGGGAAGCAGATCTCTTTGTGGTCAAGACCAGCCTGGTCTACAGAGGGAGTTCAAAGCCAA
TCATAGCTATGCACTGAGATCCTGTCTCAAAACAAACAAAATCAGCAGAGCCTTAGTTGTCCAT
TCTTTCCTCTGCGCGCGCGCGCACACGCACACGCACACACACACACACACACACACACACACAC
ATCTCTTGCAGGAAGATTAGCCTCCAACCCAACAGTGGAGCCTTCTGCATCCTGATAGAGTGTA
TGTTGAGAAGAAAGCCATGTGTATCTATGAATATATCTCTCCTGTATCCTTTGACTTGTAGCAA
TACCTCTCCATCCTCAAGGAGCTCAACCTAGGCTGGGTCTCCCCAGGCCCCAGTGGTAGACTCT
GATGGGTGGGAGGATACAGTGCTCTGGGCTGTTTTGTTACAAAAGTGTCTTCTGTCCTTTCCCC
CCACCCAATTCAGCATGAACCCTGTGAGCAGGCTCTCACAATCTCCTGGGGCGGGGCTGAGGCA
GGGGCTTTCAGCTCTTCTCCATAACCATCCCTTCTTCCTTCCCCCATGCCATTTAGCAGTTATC
ACCCAGCCTTGCCTTCTCCCTCCATCCTTTGCCCTGACATATACTGTGCCTTATTTATGCTGCA
AATATAACATTAAACTATCAAGAGAATCA

hide sequence

RefSeq Acc Id:

XM_063263681 ⟹ XP_063119751

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,537,351 - 135,649,188 (-)	NCBI

RefSeq Acc Id:

XM_063263683 ⟹ XP_063119753

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,537,351 - 135,599,872 (-)	NCBI

Protein Sequences


Protein RefSeqs	NP_001101585	(Get FASTA)	NCBI Sequence Viewer
	NP_001421613	(Get FASTA)	NCBI Sequence Viewer
	NP_001421614	(Get FASTA)	NCBI Sequence Viewer
	NP_001421615	(Get FASTA)	NCBI Sequence Viewer
	XP_006242458	(Get FASTA)	NCBI Sequence Viewer
	XP_008763969	(Get FASTA)	NCBI Sequence Viewer
	XP_063119751	(Get FASTA)	NCBI Sequence Viewer
	XP_063119753	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58606	(Get FASTA)	NCBI Sequence Viewer
	EDL86819	(Get FASTA)	NCBI Sequence Viewer
	EDL86820	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000020527.6
	ENSRNOP00000077316.2
	ENSRNOP00000085221
	ENSRNOP00000085221.2

RefSeq Acc Id:

NP_001101585 ⟸ NM_001108115

- UniProtKB:

G3V7X9 (UniProtKB/TrEMBL), A6KCX2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGDDRPFVCSAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEV
GLFNELASSFEHEFKKASDDDEKKASSAAGPLDMSLPSTPDIKVKEEEPVEVDSSPPDSPASCP
CSPPLKDKEVATKPVVISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQIGSPT
GSLPLVMHLANGQTMPMLPGPPVQMPSVISLARPVSMVPNIPGIPGPPVNNSGSISPSGHPMPS
EAKMRLKATLTHQVSSINGGCGMVVGTASTMVTARPEQNQILIQHPDAPSPAQPQVSPAQPTPS
TGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLR
NEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSATAPSNGLSVRSAA
EAVATSVLTQMASQRTELSMPIQSHVIMTPQSQSAGR

hide sequence

RefSeq Acc Id:

XP_006242458 ⟸ XM_006242396

- Peptide Label:

isoform X1

- Sequence:

show sequence

MGDDRPFVCSAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEV
GLFNELASSFEHEFKKASDDDEKKSAAGPLDMSLPSTPDIKVKEEEPVEVDSSPPDSPASCPCS
PPLKDKEVATKPVVISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQIGSPTGS
LPLVMHLANGQTMPMLPGPPVQMPSVISLARPVSMVPNIPGIPGPPVNNSGSISPSGHPMPSEA
KMRLKATLTHQVSSINGGCGMVVGTASTMVTARPEQNQILIQHPDAPSPAQPQVSPAQPTPSTG
GRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNE
VAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSATAPSNGLSVRSAAEA
VATSVLTQMASQRTELSMPIQSHVIMTPQSQSAGR

hide sequence

RefSeq Acc Id:

XP_008763969 ⟸ XM_008765747

- Peptide Label:

isoform X1

- Sequence:

show sequence

MGDDRPFVCSAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEV
GLFNELASSFEHEFKKASDDDEKKSAAGPLDMSLPSTPDIKVKEEEPVEVDSSPPDSPASCPCS
PPLKDKEVATKPVVISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQIGSPTGS
LPLVMHLANGQTMPMLPGPPVQMPSVISLARPVSMVPNIPGIPGPPVNNSGSISPSGHPMPSEA
KMRLKATLTHQVSSINGGCGMVVGTASTMVTARPEQNQILIQHPDAPSPAQPQVSPAQPTPSTG
GRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNE
VAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSATAPSNGLSVRSAAEA
VATSVLTQMASQRTELSMPIQSHVIMTPQSQSAGR

hide sequence

Ensembl Acc Id:

ENSRNOP00000020527 ⟸ ENSRNOT00000020527

Ensembl Acc Id:

ENSRNOP00000077316 ⟸ ENSRNOT00000100308

Ensembl Acc Id:

ENSRNOP00000085221 ⟸ ENSRNOT00000106850

RefSeq Acc Id:	XP_063119751 ⟸ XM_063263681
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063119753 ⟸ XM_063263683
- Peptide Label:	isoform X2
- UniProtKB:	G3V7X9 (UniProtKB/TrEMBL)

Protein Domains

bZIP C2H2-type

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-G3V7X9-F1-model_v2	AlphaFold	G3V7X9	1-485	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13695705

Promoter ID:

EPDNEW_R6230

Type:

multiple initiation site

Name:

Atf7_1

Description:

activating transcription factor 7

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	144,223,461 - 144,223,521	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304940	AgrOrtholog
BioCyc Gene	G2FUF-31930	BioCyc
Ensembl Genes	ENSRNOG00000015269	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000020527.6	UniProtKB/TrEMBL
	ENSRNOT00000100308.2	UniProtKB/TrEMBL
	ENSRNOT00000106850	ENTREZGENE
	ENSRNOT00000106850.2	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.170	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7135404	IMAGE-MGC_LOAD
InterPro	bZIP	UniProtKB/TrEMBL
	bZIP_sf	UniProtKB/TrEMBL
	bZIP_transcription_factors	UniProtKB/TrEMBL
	TF_cAMP-dep	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:315333	UniProtKB/TrEMBL
MGC_CLONE	MGC:187467	IMAGE-MGC_LOAD
NCBI Gene	315333	ENTREZGENE
PANTHER	CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN	UniProtKB/TrEMBL
Pfam	bZIP_1	UniProtKB/TrEMBL
PhenoGen	Atf7	PhenoGen
PIRSF	ATF2_CRE-BP1	UniProtKB/TrEMBL
PROSITE	BZIP	UniProtKB/TrEMBL
	BZIP_BASIC	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000015269	RatGTEx
SMART	BRLZ	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
	SSF57959	UniProtKB/TrEMBL
UniProt	A0A8I5Y7N1_RAT	UniProtKB/TrEMBL
	A0A8I5ZZM2_RAT	UniProtKB/TrEMBL
	A6KCX2	ENTREZGENE, UniProtKB/TrEMBL
	B0BMY0	ENTREZGENE, UniProtKB/TrEMBL
	G3V7X9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Atf7	activating transcription factor 7	Atf7_predicted	activating transcription factor 7 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Atf7_predicted	activating transcription factor 7 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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