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Gene: Atf7 (activating transcription factor 7) Rattus norvegicus

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Symbol:

Atf7

Name:

activating transcription factor 7

RGD ID:

1304940

Description:

Predicted to enable several functions, including DNA-binding transcription repressor activity, RNA polymerase II-specific; cAMP response element binding activity; and transcription coactivator binding activity. Predicted to be involved in several processes, including hepatocyte apoptotic process; p38MAPK cascade; and regulation of transcription by RNA polymerase II. Predicted to be located in nucleoplasm. Predicted to be part of RNA polymerase II transcription regulator complex. Orthologous to human ATF7 (activating transcription factor 7); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; amphetamine.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

cyclic AMP-dependent transcription factor ATF-7; LOC315333

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	135,537,351 - 135,649,188 (-)	NCBI		GRCr8
mRatBN7.2	7	133,660,491 - 133,750,902 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	133,663,294 - 133,750,848 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	135,419,512 - 135,506,589 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	137,648,883 - 137,735,950 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	137,635,114 - 137,722,181 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	144,131,382 - 144,223,463 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	144,136,325 - 144,223,429 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	141,923,377 - 142,016,052 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	141,283,187 - 141,372,637 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	141,351,602 - 141,448,693 (-)	NCBI
Celera	7	130,091,319 - 130,178,104 (-)	NCBI		Celera
Cytogenetic Map	7	q36	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Atf7	Rat	colorectal cancer	disease_progression	ISO	ATF7 (Homo sapiens)	11055686		RGD

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Atf7	Rat	Neurodevelopmental Disorders		ISO	ATF7 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Neurodevelopmental disorder	ClinVar	PMID:25741868

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Atf7	Rat	1,2-dimethylhydrazine	multiple interactions	ISO	Atf7 (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of ATF7 mRNA	CTD	PMID:22206623
Atf7	Rat	17beta-estradiol	decreases expression	EXP		6480464	Estradiol results in decreased expression of ATF7 mRNA	CTD	PMID:32145629
Atf7	Rat	2,3',4,4',5-Pentachlorobiphenyl	decreases expression	ISO	Atf7 (Mus musculus)	6480464	2 more ...	CTD	PMID:31388691
Atf7	Rat	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	Atf7 (Mus musculus)	6480464	Tetrachlorodibenzodioxin results in increased expression of ATF7 mRNA	CTD	PMID:24058054
Atf7	Rat	2,3,7,8-tetrachlorodibenzodioxine	decreases expression	EXP		6480464	Tetrachlorodibenzodioxin results in decreased expression of ATF7 mRNA	CTD	PMID:33387578
Atf7	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	ISO	Atf7 (Mus musculus)	6480464	Tetrachlorodibenzodioxin affects the expression of ATF7 mRNA	CTD	PMID:21570461
Atf7	Rat	2,3,7,8-tetrachlorodibenzodioxine	affects expression	EXP		6480464	Tetrachlorodibenzodioxin affects the expression of ATF7 mRNA	CTD	PMID:22298810
Atf7	Rat	2-hydroxypropanoic acid	increases expression	ISO	ATF7 (Homo sapiens)	6480464	Lactic Acid results in increased expression of ATF7 mRNA	CTD	PMID:30851411
Atf7	Rat	3,4-methylenedioxymethamphetamine	increases expression	ISO	Atf7 (Mus musculus)	6480464	N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of ATF7 mRNA	CTD	PMID:20188158
Atf7	Rat	amphetamine	decreases expression	EXP		6480464	Amphetamine results in decreased expression of ATF7 mRNA	CTD	PMID:30779732
Atf7	Rat	baicalein	multiple interactions	EXP		6480464	[Carbon Tetrachloride co-treated with baicalein] results in increased expression of ATF7 protein	CTD	PMID:33779329
Atf7	Rat	benzo[a]pyrene	increases methylation	ISO	ATF7 (Homo sapiens)	6480464	Benzo(a)pyrene results in increased methylation of ATF7 5' UTR	CTD	PMID:27901495
Atf7	Rat	benzo[a]pyrene	affects methylation	ISO	ATF7 (Homo sapiens)	6480464	Benzo(a)pyrene affects the methylation of ATF7 promoter	CTD	PMID:27901495
Atf7	Rat	bisphenol A	decreases expression	EXP		6480464	bisphenol A results in decreased expression of ATF7 mRNA	CTD	PMID:25181051 more ...
Atf7	Rat	bisphenol A	decreases methylation	ISO	ATF7 (Homo sapiens)	6480464	bisphenol A results in decreased methylation of ATF7 gene	CTD	PMID:31601247
Atf7	Rat	cadmium atom	multiple interactions	ISO	ATF7 (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of ATF7 mRNA and ATF7 promotes the reaction [Cadmium results in increased expression of MT1A mRNA]	CTD	PMID:28632756 and PMID:35301059
Atf7	Rat	cadmium dichloride	decreases expression	ISO	ATF7 (Homo sapiens)	6480464	Cadmium Chloride results in decreased expression of ATF7 mRNA	CTD	PMID:38568856
Atf7	Rat	cadmium dichloride	multiple interactions	ISO	ATF7 (Homo sapiens)	6480464	[Cadmium Chloride results in increased abundance of Cadmium] which results in decreased expression of ATF7 mRNA	CTD	PMID:35301059
Atf7	Rat	caffeine	increases phosphorylation	ISO	ATF7 (Homo sapiens)	6480464	Caffeine results in increased phosphorylation of ATF7 protein	CTD	PMID:35688186
Atf7	Rat	carbon nanotube	affects expression	ISO	Atf7 (Mus musculus)	6480464	Nanotubes and Carbon affects the expression of ATF7 mRNA	CTD	PMID:25554681
Atf7	Rat	carbon nanotube	decreases expression	ISO	Atf7 (Mus musculus)	6480464	Nanotubes and Carbon analog results in decreased expression of ATF7 mRNA	CTD	PMID:25554681
Atf7	Rat	cocaine	affects expression	ISO	Atf7 (Mus musculus)	6480464	Cocaine affects the expression of ATF7 mRNA	CTD	PMID:15681117
Atf7	Rat	coumarin	decreases phosphorylation	ISO	ATF7 (Homo sapiens)	6480464	coumarin results in decreased phosphorylation of ATF7 protein	CTD	PMID:35688186
Atf7	Rat	cyclosporin A	increases methylation	ISO	ATF7 (Homo sapiens)	6480464	Cyclosporine results in increased methylation of ATF7 promoter	CTD	PMID:27989131
Atf7	Rat	dicrotophos	increases expression	ISO	ATF7 (Homo sapiens)	6480464	dicrotophos results in increased expression of ATF7 mRNA	CTD	PMID:28302478
Atf7	Rat	doxorubicin	decreases expression	ISO	ATF7 (Homo sapiens)	6480464	Doxorubicin results in decreased expression of ATF7 mRNA	CTD	PMID:29803840
Atf7	Rat	enzyme inhibitor	multiple interactions	ISO	ATF7 (Homo sapiens)	6480464	[Enzyme Inhibitors results in decreased activity of OGA protein] which results in increased O-linked glycosylation of ATF7 protein	CTD	PMID:23301498
Atf7	Rat	folic acid	multiple interactions	ISO	Atf7 (Mus musculus)	6480464	[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of ATF7 mRNA	CTD	PMID:22206623
Atf7	Rat	FR900359	increases phosphorylation	ISO	ATF7 (Homo sapiens)	6480464	FR900359 results in increased phosphorylation of ATF7 protein	CTD	PMID:37730182
Atf7	Rat	gentamycin	decreases expression	EXP		6480464	Gentamicins results in decreased expression of ATF7 mRNA	CTD	PMID:33387578
Atf7	Rat	hexadecanoic acid	decreases phosphorylation	ISO	ATF7 (Homo sapiens)	6480464	Palmitic Acid results in decreased phosphorylation of ATF7 protein	CTD	PMID:28073184
Atf7	Rat	lead diacetate	increases expression	ISO	Atf7 (Mus musculus)	6480464	lead acetate results in increased expression of ATF7 mRNA	CTD	PMID:22609695
Atf7	Rat	N-methyl-4-phenylpyridinium	increases expression	EXP		6480464	1-Methyl-4-phenylpyridinium results in increased expression of ATF7 mRNA	CTD	PMID:28801915
Atf7	Rat	nickel atom	decreases expression	ISO	ATF7 (Homo sapiens)	6480464	Nickel results in decreased expression of ATF7 mRNA	CTD	PMID:25583101
Atf7	Rat	paracetamol	affects expression	ISO	Atf7 (Mus musculus)	6480464	Acetaminophen affects the expression of ATF7 mRNA	CTD	PMID:17562736
Atf7	Rat	rac-lactic acid	increases expression	ISO	ATF7 (Homo sapiens)	6480464	Lactic Acid results in increased expression of ATF7 mRNA	CTD	PMID:30851411
Atf7	Rat	resveratrol	multiple interactions	ISO	ATF7 (Homo sapiens)	6480464	[Plant Extracts co-treated with Resveratrol] results in decreased expression of ATF7 mRNA	CTD	PMID:23557933
Atf7	Rat	Soman	increases expression	EXP		6480464	Soman results in increased expression of ATF7 mRNA	CTD	PMID:19281266
Atf7	Rat	tetrachloromethane	multiple interactions	EXP		6480464	[Carbon Tetrachloride co-treated with baicalein] results in increased expression of ATF7 protein	CTD	PMID:33779329
Atf7	Rat	titanium dioxide	decreases methylation	ISO	Atf7 (Mus musculus)	6480464	titanium dioxide results in decreased methylation of ATF7 promoter	CTD	PMID:35295148
Atf7	Rat	trichostatin A	decreases expression	ISO	ATF7 (Homo sapiens)	6480464	trichostatin A results in decreased expression of ATF7 mRNA	CTD	PMID:24935251
Atf7	Rat	triptonide	increases expression	ISO	Atf7 (Mus musculus)	6480464	triptonide results in increased expression of ATF7 mRNA	CTD	PMID:33045310
Atf7	Rat	tris(2-butoxyethyl) phosphate	affects expression	ISO	ATF7 (Homo sapiens)	6480464	tris(2-butoxyethyl) phosphate affects the expression of ATF7 mRNA	CTD	PMID:29024780
Atf7	Rat	valproic acid	affects expression	ISO	Atf7 (Mus musculus)	6480464	Valproic Acid affects the expression of ATF7 mRNA	CTD	PMID:17963808
Atf7	Rat	valproic acid	increases methylation	ISO	ATF7 (Homo sapiens)	6480464	Valproic Acid results in increased methylation of ATF7 gene	CTD	PMID:29154799
Atf7	Rat	valproic acid	increases expression	ISO	ATF7 (Homo sapiens)	6480464	Valproic Acid results in increased expression of ATF7 mRNA	CTD	PMID:23179753
Atf7	Rat	valproic acid	decreases expression	ISO	ATF7 (Homo sapiens)	6480464	Valproic Acid results in decreased expression of ATF7 mRNA	CTD	PMID:24935251
Atf7	Rat	vorinostat	increases expression	ISO	ATF7 (Homo sapiens)	6480464	vorinostat results in increased expression of ATF7 mRNA	CTD	PMID:27188386

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Atf7	Rat	heart development	involved_in	ISO	Atf7 (Mus musculus)	1624291	MGI:109349 PMID:17699753	RGD	PMID:17699753
Atf7	Rat	hematopoietic progenitor cell differentiation	involved_in	ISO	Atf7 (Mus musculus)	1624291	MGI:109349 PMID:17699753	RGD	PMID:17699753
Atf7	Rat	hepatocyte apoptotic process	involved_in	ISO	Atf7 (Mus musculus)	1624291	MGI:109349 PMID:17699753	RGD	PMID:17699753
Atf7	Rat	in utero embryonic development	involved_in	ISO	Atf7 (Mus musculus)	1624291	MGI:109349 PMID:17699753	RGD	PMID:17699753
Atf7	Rat	liver development	involved_in	ISO	Atf7 (Mus musculus)	1624291	MGI:109349 PMID:17699753	RGD	PMID:17699753
Atf7	Rat	negative regulation of transcription by RNA polymerase II	involved_in	ISO	ATF7 (Homo sapiens) and UniProtKB:P17544-4	1624291	PMID:8288576	RGD	PMID:8288576
Atf7	Rat	p38MAPK cascade	involved_in	ISO	Atf7 (Mus musculus)	1624291	MGI:109349 PMID:17699753	RGD	PMID:17699753
Atf7	Rat	positive regulation of transcription by RNA polymerase II	involved_in	ISO	ATF7 (Homo sapiens)	1624291	PMID:17264123	RGD	PMID:17264123
Atf7	Rat	positive regulation of transcription by RNA polymerase II	involved_in	IEA	UniProtKB:P17544 and ensembl:ENSP00000399465	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Atf7	Rat	regulation of DNA-templated transcription	involved_in	ISO	ATF7 (Homo sapiens)	1624291	PMID:8288576	RGD	PMID:8288576
Atf7	Rat	regulation of DNA-templated transcription	involved_in	IEA	UniProtKB:P17544 and ensembl:ENSP00000399465	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Atf7	Rat	regulation of DNA-templated transcription	involved_in	IEA	InterPro:IPR004827 and InterPro:IPR046347	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Atf7	Rat	regulation of transcription by RNA polymerase II	involved_in	IBA	CGD:CAL0000176357 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Atf7	Rat	nucleoplasm	located_in	ISO	ATF7 (Homo sapiens)	1624291	PMID:17264123	RGD	PMID:17264123
Atf7	Rat	nucleoplasm	located_in	IEA	UniProtKB:P17544 and ensembl:ENSP00000399465	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Atf7	Rat	nucleus	located_in	IEA	UniProtKB-SubCell:SL-0191	1600115	GO_REF:0000044	UniProt	GO_REF:0000044
Atf7	Rat	nucleus	located_in	IEA	UniProtKB-KW:KW-0539	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Atf7	Rat	nucleus	located_in	IEA	UniRule:UR001116761	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Atf7	Rat	RNA polymerase II transcription regulator complex	part_of	ISO	ATF7 (Homo sapiens)	1624291	PMID:20102225	RGD	PMID:20102225
Atf7	Rat	RNA polymerase II transcription regulator complex	part_of	IEA	UniProtKB:P17544 and ensembl:ENSP00000399465	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Atf7	Rat	cAMP response element binding	enables	IBA	MGI:109349 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Atf7	Rat	DNA binding	enables	IEA	UniRule:UR001116761	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Atf7	Rat	DNA binding	enables	IEA	UniProtKB-KW:KW-0238	1600115	GO_REF:0000043	UniProt	GO_REF:0000043
Atf7	Rat	DNA-binding transcription factor activity	enables	IEA	InterPro:IPR004827 and InterPro:IPR046347	1600115	GO_REF:0000002	InterPro	GO_REF:0000002
Atf7	Rat	DNA-binding transcription factor activity	enables	IEA	UniRule:UR001116761	1600115	GO_REF:0000104	UniProt	GO_REF:0000104
Atf7	Rat	DNA-binding transcription factor activity, RNA polymerase II-specific	enables	IBA	FB:FBgn0265193 more ...	1600115	GO_REF:0000033	GO_Central	GO_REF:0000033
Atf7	Rat	DNA-binding transcription repressor activity, RNA polymerase II-specific	enables	ISO	ATF7 (Homo sapiens) and UniProtKB:P17544-4	1624291	PMID:8288576	RGD	PMID:8288576
Atf7	Rat	enzyme binding	enables	ISO	ATF7 (Homo sapiens)	1624291	UniProtKB:Q96EB6 and PMID:23382074	RGD	PMID:23382074
Atf7	Rat	enzyme binding	enables	IEA	UniProtKB:P17544 and ensembl:ENSP00000399465	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Atf7	Rat	mitogen-activated protein kinase binding	enables	ISO	ATF7 (Homo sapiens)	1624291	PMID:10376527	RGD	PMID:10376527
Atf7	Rat	mitogen-activated protein kinase binding	enables	IEA	UniProtKB:P17544 and ensembl:ENSP00000399465	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Atf7	Rat	protein binding	enables	ISO	ATF7 (Homo sapiens)	1624291	UniProtKB:O00268 more ...	RGD	PMID:10376527 more ...
Atf7	Rat	RNA polymerase II cis-regulatory region sequence-specific DNA binding	enables	ISO	ATF7 (Homo sapiens) and UniProtKB:P17544-4	1624291	PMID:8288576	RGD	PMID:8288576
Atf7	Rat	sequence-specific double-stranded DNA binding	enables	ISO	ATF7 (Homo sapiens)	1624291	PMID:28473536	RGD	PMID:28473536
Atf7	Rat	sequence-specific double-stranded DNA binding	enables	IEA	UniProtKB:P17544 and ensembl:ENSP00000399465	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Atf7	Rat	transcription cis-regulatory region binding	enables	ISO	ATF7 (Homo sapiens)	1624291	PMID:17264123	RGD	PMID:17264123
Atf7	Rat	transcription cis-regulatory region binding	enables	IEA	UniProtKB:P17544 and ensembl:ENSP00000399465	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Atf7	Rat	transcription coactivator binding	enables	ISO	ATF7 (Homo sapiens)	1624291	PMID:17264123	RGD	PMID:17264123
Atf7	Rat	transcription coactivator binding	enables	IEA	UniProtKB:P17544 and ensembl:ENSP00000399465	1600115	GO_REF:0000107	Ensembl	GO_REF:0000107
Atf7	Rat	zinc ion binding	enables	IEA	UniProtKB-KW:KW-0863	1600115	GO_REF:0000043	UniProt	GO_REF:0000043

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	Expression of activating transcription factor 7 is correlated with prognosis of colorectal cancer.	Guo HQ, etal., J Cancer Res Ther. 2015 Apr-Jun;11(2):319-23. doi: 10.4103/0973-1482.148688.
4.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
5.	GOA pipeline	RGD automated data pipeline
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:8288576	PMID:10376527	PMID:12477932	PMID:17264123	PMID:23382074

Atf7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	135,537,351 - 135,649,188 (-)	NCBI		GRCr8
mRatBN7.2	7	133,660,491 - 133,750,902 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	133,663,294 - 133,750,848 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	135,419,512 - 135,506,589 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	137,648,883 - 137,735,950 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	137,635,114 - 137,722,181 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	144,131,382 - 144,223,463 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	144,136,325 - 144,223,429 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	141,923,377 - 142,016,052 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	141,283,187 - 141,372,637 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	141,351,602 - 141,448,693 (-)	NCBI
Celera	7	130,091,319 - 130,178,104 (-)	NCBI		Celera
Cytogenetic Map	7	q36	NCBI

ATF7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	53,507,856 - 53,626,382 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	53,507,856 - 53,626,410 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	53,901,640 - 54,020,166 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	52,196,026 - 52,306,403 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	52,196,027 - 52,306,405	NCBI
Celera	12	53,556,201 - 53,670,237 (-)	NCBI		Celera
Cytogenetic Map	12	q13.13	NCBI
HuRef	12	50,941,222 - 51,059,806 (-)	NCBI		HuRef
CHM1_1	12	53,868,696 - 53,987,260 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	53,473,861 - 53,592,424 (-)	NCBI		T2T-CHM13v2.0

Atf7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	102,434,381 - 102,533,899 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	102,434,381 - 102,533,899 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	102,525,946 - 102,625,464 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	102,525,946 - 102,625,464 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	102,367,074 - 102,455,852 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	102,364,677 - 102,453,455 (-)	NCBI		MGSCv36	mm8
Celera	15	104,694,388 - 104,783,409 (-)	NCBI		Celera
Cytogenetic Map	15	F3	NCBI
cM Map	15	57.66	NCBI

Atf7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955458	803,738 - 898,967 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955458	803,738 - 898,847 (-)	NCBI	ChiLan1.0	ChiLan1.0

LOC100981854
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	40,559,286 - 40,676,753 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	40,556,050 - 40,673,517 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	35,128,031 - 35,245,505 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	35,914,378 - 36,026,225 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	35,914,378 - 36,021,141 (+)	Ensembl	panpan1.1		panPan2

LOC607149
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	1,617,466 - 1,711,356 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	1,617,289 - 1,706,637 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	44,543,239 - 44,632,547 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	1,621,590 - 1,710,939 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	1,621,533 - 1,710,913 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	1,638,801 - 1,728,103 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	1,621,077 - 1,711,380 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	44,944,942 - 45,034,279 (-)	NCBI		UU_Cfam_GSD_1.0

LOC101960773
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	62,279,991 - 62,381,384 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936512	10,785,763 - 10,884,795 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936512	10,780,826 - 10,884,806 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ATF7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	18,728,694 - 18,838,542 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	18,726,329 - 18,838,670 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	19,164,389 - 19,285,213 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103238406
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	49,608,653 - 49,728,702 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	49,618,136 - 49,728,289 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	196,321,751 - 196,441,009 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Atf7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624904	1,613,487 - 1,706,549 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624904	1,604,083 - 1,705,739 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Atf7
334 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	342
Count of miRNA genes:	200
Interacting mature miRNAs:	223
Transcripts:	ENSRNOT00000020527
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1300179	Kidm5	Kidney mass QTL 5	3.51		kidney mass (VT:0002707)	left kidney wet weight (CMO:0000083)	7	43747012	135012528	Rat
1354582	Stl11	Serum triglyceride level QTL 11	3.42		blood triglyceride amount (VT:0002644)	serum triglyceride level (CMO:0000360)	7	119513385	135012528	Rat
731176	Glom5	Glomerulus QTL 5	2.5	0.0035	kidney glomerulus morphology trait (VT:0005325)	count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)	7	96670164	135012528	Rat
1300112	Bp183	Blood pressure QTL 183	3.51		arterial blood pressure trait (VT:2000000)	blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)	7	111182207	135012528	Rat
1358914	Bp266	Blood pressure QTL 266			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat
2306821	Bp335	Blood pressure QTL 335		0.001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	7	106571501	135012528	Rat
631663	Bw6	Body weight QTL 6	3.4		body mass (VT:0001259)	body weight (CMO:0000012)	7	111075573	134976056	Rat
2299163	Iddm34	Insulin dependent diabetes mellitus QTL 34	2.71		blood glucose amount (VT:0000188)	age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)	7	91281130	135012528	Rat
70173	Niddm19	Non-insulin dependent diabetes mellitus QTL 19	4.33	0.00005	blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	7	64002457	135012528	Rat
1549899	Stresp8	Stress response QTL 8	4.37	0.0008	stress-related behavior trait (VT:0010451)	defensive burying duration (CMO:0001961)	7	90482196	135012528	Rat
731174	Uae23	Urinary albumin excretion QTL 23	2.4	0.0042	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	7	104603555	135012528	Rat
1358891	Bp265	Blood pressure QTL 265	2.21		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	7	83591953	134666232	Rat

D7Mit20

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,749,048 - 133,749,134 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,221,626 - 144,221,711	NCBI	Rnor6.0
Rnor_5.0	7	142,014,215 - 142,014,300	UniSTS	Rnor5.0
RGSC_v3.4	7	141,370,833 - 141,370,919	RGD	RGSC3.4
RGSC_v3.4	7	141,370,834 - 141,370,919	UniSTS	RGSC3.4
RGSC_v3.1	7	141,447,270 - 141,447,356	RGD
Celera	7	130,176,301 - 130,176,386	UniSTS
Cytogenetic Map	7	q36	UniSTS

D7Rat80

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	7	135,560,615 - 135,560,836 (+)	Marker Load Pipeline
mRatBN7.2	7	133,682,097 - 133,682,318 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,154,650 - 144,154,870	NCBI	Rnor6.0
Rnor_5.0	7	141,946,645 - 141,946,865	UniSTS	Rnor5.0
RGSC_v3.4	7	141,301,528 - 141,301,748	UniSTS	RGSC3.4
RGSC_v3.4	7	141,301,527 - 141,301,748	RGD	RGSC3.4
RGSC_v3.1	7	141,377,965 - 141,378,185	RGD
Celera	7	130,109,659 - 130,109,869	UniSTS
RH 3.4 Map	7	1060.0	RGD
RH 3.4 Map	7	1060.0	UniSTS
SHRSP x BN Map	7	88.5699	RGD
SHRSP x BN Map	7	88.5699	UniSTS
Cytogenetic Map	7	q36	UniSTS

BE096030

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,661,848 - 133,662,027 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,134,403 - 144,134,581	NCBI	Rnor6.0
Rnor_5.0	7	141,926,398 - 141,926,576	UniSTS	Rnor5.0
RGSC_v3.4	7	141,281,280 - 141,281,458	UniSTS	RGSC3.4
Celera	7	130,089,413 - 130,089,591	UniSTS
RH 3.4 Map	7	1063.0	UniSTS
Cytogenetic Map	7	q36	UniSTS

RH143199

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,661,857 - 133,662,001 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,134,412 - 144,134,555	NCBI	Rnor6.0
Rnor_5.0	7	141,926,407 - 141,926,550	UniSTS	Rnor5.0
RGSC_v3.4	7	141,281,289 - 141,281,432	UniSTS	RGSC3.4
Celera	7	130,089,422 - 130,089,565	UniSTS
RH 3.4 Map	7	1064.0	UniSTS
Cytogenetic Map	7	q36	UniSTS

AW530091

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,660,824 - 133,660,977 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,133,379 - 144,133,531	NCBI	Rnor6.0
Rnor_5.0	7	141,925,374 - 141,925,526	UniSTS	Rnor5.0
RGSC_v3.4	7	141,280,255 - 141,280,407	UniSTS	RGSC3.4
Celera	7	130,088,389 - 130,088,541	UniSTS
RH 3.4 Map	7	1131.02	UniSTS
Cytogenetic Map	7	q36	UniSTS

BE104942

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	7	133,748,100 - 133,748,251 (+)	MAPPER	mRatBN7.2
Rnor_6.0	7	144,220,678 - 144,220,828	NCBI	Rnor6.0
Rnor_5.0	7	142,013,267 - 142,013,417	UniSTS	Rnor5.0
RGSC_v3.4	7	141,369,886 - 141,370,036	UniSTS	RGSC3.4
Celera	7	130,175,353 - 130,175,503	UniSTS
RH 3.4 Map	7	1060.0	UniSTS
Cytogenetic Map	7	q36	UniSTS

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
9	11	49	113	91	90	59	25	59	6	218	97	93	45	60	31


RefSeq Transcripts	NM_001108115	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001434686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006242396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008765747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063263683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC109743	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC158605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000020527 ⟹ ENSRNOP00000020527

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	133,663,294 - 133,750,848 (-)	Ensembl
Rnor_6.0 Ensembl	7	144,136,325 - 144,223,429 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000100308 ⟹ ENSRNOP00000077316

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	133,668,150 - 133,750,481 (-)	Ensembl

Ensembl Acc Id:

ENSRNOT00000106850 ⟹ ENSRNOP00000085221

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	7	133,663,294 - 133,688,345 (-)	Ensembl

RefSeq Acc Id:

NM_001108115 ⟹ NP_001101585

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,542,276 - 135,629,359 (-)	NCBI
mRatBN7.2	7	133,663,756 - 133,750,852 (-)	NCBI
Rnor_6.0	7	144,136,310 - 144,223,429 (-)	NCBI
Rnor_5.0	7	141,923,377 - 142,016,052 (-)	NCBI
RGSC_v3.4	7	141,283,187 - 141,372,637 (-)	RGD
Celera	7	130,091,319 - 130,178,104 (-)	RGD

Sequence:

show sequence

AAGTATCTGCTCCGCTGAGGGGGGAAAGGAGGAGCAGGAGACAGATTGTGGGACCGAGCGCGGGCGGGCGGGAGGCGCCGGAGCTACCAGCGGCTCTGCTCTGCTTTATGAAATATGGGAGACGACAG
ACCGTTTGTGTGCAGTGCCCCAGGCTGTGGACAGAGATTTACAAATGAGGACCACCTGGCAGTTCATAAACATAAGCATGAGATGACCCTGAAGTTCGGCCCGGCCCGGACGGACTCTGTCATCATTG
CAGATCAAACACCTACTCCAACAAGATTCCTGAAGAACTGTGAGGAGGTGGGGCTCTTCAATGAATTAGCTAGTTCCTTTGAACATGAATTTAAGAAAGCTTCTGATGATGATGAAAAAAAGGCAAGT
AGTGCTGCTGGGCCTCTAGACATGTCTCTGCCTTCTACACCAGACATCAAAGTCAAGGAGGAAGAGCCAGTGGAGGTGGACTCATCACCCCCCGACAGTCCTGCTTCCTGCCCCTGCTCCCCGCCACT
GAAAGACAAGGAAGTTGCCACAAAACCTGTTGTGATCTCTACCCCTACACCCACCATCGTACGTCCTGGCTCCCTGCCTCTGCACTTAGGTTATGATCCACTTCATCCAACTCTTCCTTCCCCAACCT
CTGTCATCACACAGGCTCCACCATCCAACAGGCAAATAGGATCTCCTACTGGCTCCCTCCCTCTCGTCATGCATCTTGCTAATGGACAGACCATGCCAATGCTGCCAGGGCCTCCAGTACAGATGCCT
TCTGTTATTTCGCTGGCCAGACCTGTTTCCATGGTGCCCAACATTCCTGGTATACCTGGCCCACCAGTTAACAATAGTGGCTCTATTTCTCCCTCTGGCCACCCTATGCCGTCAGAAGCCAAAATGAG
ACTAAAAGCCACATTGACCCACCAAGTTTCTTCAATCAATGGAGGTTGTGGAATGGTGGTAGGCACTGCAAGCACCATGGTGACAGCCCGTCCAGAGCAGAACCAGATCCTCATCCAGCACCCGGATG
CCCCATCCCCTGCCCAGCCACAGGTGTCTCCAGCTCAGCCCACCCCTAGCACAGGGGGACGGCGTCGGCGCACAGTGGATGAAGATCCAGATGAGCGGCGGCAGCGATTTTTAGAGCGGAACAGAGCT
GCAGCCTCCCGATGCCGCCAAAAGCGAAAGCTGTGGGTCTCCTCCCTGGAAAAGAAGGCAGAAGAACTTACTTCTCAGAACATTCAGCTGAGTAATGAAGTCACATTACTACGCAATGAGGTGGCTCA
GTTGAAACAGCTACTGTTAGCTCATAAAGACTGCCCAGTCACTGCACTACAGAAAAAGACTCAAGGCTACCTAGAAAGTCCCAAGGAAAGCTCAGAGCCAACGGGTTCTCCAGCCCCAGTGATTCAGC
ACAGTTCCGCAACAGCCCCTAGCAATGGCCTTAGTGTTCGATCTGCAGCTGAAGCTGTGGCCACCTCGGTCCTCACTCAGATGGCCAGCCAAAGGACAGAACTGAGCATGCCCATACAGTCACATGTG
ATCATGACCCCACAGTCACAGTCTGCGGGCAGATGATGCCTCCCATGATGGAGAGGTCCCCAGCCAGAGCTCGCCAGCCTGAGCCAAAAGAGAGATCAACTTATCCCTCCTGTCTGCCTTGGAATTGG
CAGTATGGAGAGGGAGAAATTGTGTGTTGTGAGTATGGACAGATGTGGGGCTTTTCTCTTTAGCCACATGATCATGTACAATTAACACCTGTACAACGGGCTTTTGGCCCCAAAGCCACATAGATCAT
CCCCCAAGGGTAGGGTTTCTTATGATCCTACAACCAAAGGCCTTTCCACATGGTCTGAGCAATCACCCCAGCCCTGATGCATGTGTGCCTCTCTTAACACTAACCCTTGCACTTGTAGGTTTGGGGTT
TCTCAGTGTCCTCTCCTCCCCTTGAGCTGTGGCTGATACCTTCTTATCTCTTACTAGCATGCCACTTCCTGCCAGATAGAGGGAGACGAGATTTGATGGCGTGTTACTTGCTGTCCCATCCCCAGCCA
CCCCATGCACTCAGGACTTTGTCCCCAACAGCTGCTTATTTGTCTCTTCCCCTTCTAAGCGACAGTGAAAACACTCACTTGTTGAGAATGTAATGCATTTAATGTGTGAGGTAGCAGTGCTTCCCGCC
TCTTCCCTGGGCTCTACTCCTGTCTGCTACCAAAAACAAACACAGACAGAAAAAGCAAAACT

hide sequence

RefSeq Acc Id:

XM_006242396 ⟹ XP_006242458

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,537,351 - 135,629,420 (-)	NCBI
mRatBN7.2	7	133,664,291 - 133,750,902 (-)	NCBI
Rnor_6.0	7	144,131,382 - 144,223,463 (-)	NCBI
Rnor_5.0	7	141,923,377 - 142,016,052 (-)	NCBI

Sequence:

show sequence

GCGAGAAGTGAACACGCCTGGCCGGACGGGAGGAAAGTATCTGCTCCGCTGAGGGGGGAAAGGA
GGAGCAGGAGACAGATTGTGGGACCGAGCGCGGGCGGGCGGGAGGCGCCGGAGCTACCAGCGGCTCTGCTCTGCTTTATGAAATATGGGAGACGACAGACCGTTTGTGTGCAGTGCCCCAGGCTGTGG
ACAGAGATTTACAAATGAGGACCACCTGGCAGTTCATAAACATAAGCATGAGATGACCCTGAAGTTCGGCCCGGCCCGGACGGACTCTGTCATCATTGCAGATCAAACACCTACTCCAACAAGATTCC
TGAAGAACTGTGAGGAGGTGGGGCTCTTCAATGAATTAGCTAGTTCCTTTGAACATGAATTTAAGAAAGCTTCTGATGATGATGAAAAAAAGAGTGCTGCTGGGCCTCTAGACATGTCTCTGCCTTCT
ACACCAGACATCAAAGTCAAGGAGGAAGAGCCAGTGGAGGTGGACTCATCACCCCCCGACAGTCCTGCTTCCTGCCCCTGCTCCCCGCCACTGAAAGACAAGGAAGTTGCCACAAAACCTGTTGTGAT
CTCTACCCCTACACCCACCATCGTACGTCCTGGCTCCCTGCCTCTGCACTTAGGTTATGATCCACTTCATCCAACTCTTCCTTCCCCAACCTCTGTCATCACACAGGCTCCACCATCCAACAGGCAAA
TAGGATCTCCTACTGGCTCCCTCCCTCTCGTCATGCATCTTGCTAATGGACAGACCATGCCAATGCTGCCAGGGCCTCCAGTACAGATGCCTTCTGTTATTTCGCTGGCCAGACCTGTTTCCATGGTG
CCCAACATTCCTGGTATACCTGGCCCACCAGTTAACAATAGTGGCTCTATTTCTCCCTCTGGCCACCCTATGCCGTCAGAAGCCAAAATGAGACTAAAAGCCACATTGACCCACCAAGTTTCTTCAAT
CAATGGAGGTTGTGGAATGGTGGTAGGCACTGCAAGCACCATGGTGACAGCCCGTCCAGAGCAGAACCAGATCCTCATCCAGCACCCGGATGCCCCATCCCCTGCCCAGCCACAGGTGTCTCCAGCTC
AGCCCACCCCTAGCACAGGGGGACGGCGTCGGCGCACAGTGGATGAAGATCCAGATGAGCGGCGGCAGCGATTTTTAGAGCGGAACAGAGCTGCAGCCTCCCGATGCCGCCAAAAGCGAAAGCTGTGG
GTCTCCTCCCTGGAAAAGAAGGCAGAAGAACTTACTTCTCAGAACATTCAGCTGAGTAATGAAGTCACATTACTACGCAATGAGGTGGCTCAGTTGAAACAGCTACTGTTAGCTCATAAAGACTGCCC
AGTCACTGCACTACAGAAAAAGACTCAAGGCTACCTAGAAAGTCCCAAGGAAAGCTCAGAGCCAACGGGTTCTCCAGCCCCAGTGATTCAGCACAGTTCCGCAACAGCCCCTAGCAATGGCCTTAGTG
TTCGATCTGCAGCTGAAGCTGTGGCCACCTCGGTCCTCACTCAGATGGCCAGCCAAAGGACAGAACTGAGCATGCCCATACAGTCACATGTGATCATGACCCCACAGTCACAGTCTGCGGGCAGATGA
TGCCTCCCATGATGGAGAGGTCCCCAGCCAGAGCTCGCCAGCCTGAGCCAAAAGAGAGATCAACTTATCCCTCCTGTCTGCCTTGGAATTGGCAGTATGGAGAGGGAGAAATTGTGTGTTGTGAGTAT
GGACAGATGTGGGGCTTTTCTCTTTAGCCACATGATCATGTACAATTAACACCTGTACAACGGGCTTTTGGCCCCAAAGCCACATAGATCATCCCCCAAGGGTAGGGTTTCTTATGATCCTACAACCA
AAGGCCTTTCCACATGGTCTGAGCAATCACCCCAGCCCTGATGCATGTGTGCCTCTCTTAACACTAACCCTTGCACTTGTAGGTTTGGGGTTTCTCAGTGTCCTCTCCTCCCCTTGAGCTGTGGCTGA
TACCTTCTTATCTCTTACTAGCATGCCACTTCCTGCCAGATAGAGGGAGACGAGATTTGATGGCGTGTTACTTGCTGTCCCATCCCCAGCCACCCCATGCACTCAGGACTTTGTCCCCAACAGCTGCT
TATTTGTCTCTTCCCCTTCTAAGCGACAGTGAAAACACTCACTTGTTGAGAATGTAATGCATTTAATGTGTGAGGTAGCAGTGCTTCCCGCCTCTTCCCTGGGCTCTACTCCTGTCTGCTACCAAAAA
CAAACACAGACAGAAAAAGCAAAACTCTGAGAGTTTGAATCATTTTTCAGTTCCAAATCTATCGGTACCTCATTTCGTCTCTTGACTTTCCTTAGTCTAGTGGTGGGGTCTTTCCTACTTCCCCACTC
TGCCTTGGAAACCTCATCTTGTGGCCTTATTGTTAGTGGCAATGAAAAGGGAGAGAGCCGGGGATCTAACTGGGCCTCCCTGTCTCCTTCCCTACCCTCCAGTTCTAATCATCAGGGCAGACAGGAAC
AGTGTAACTTAAACTTGTTCCATCAGGTTACTGGATTAACTGATTCTTTTATGTTTTACAAGAGTTTACTGGCCAAAGTCTACATATTGTCATCTTTGGTCACCTGTGCTCCTGCCTCTCCACCCTGC
TTCCCTGTCCATGTCACTGCCTGTTTCCACTAGAATTTCTTTAGCTCAGCCCTCCTCAGAGTTGTCAGACAGAAGCTGCCTTCATTCTCTGTCCCTCCTGCAGCTCTCAGCCTCCCTTCTTTCCTAAG
GTATGTCTTGTACCCACCAGTGTCCAGCACTCTCCCAGCTACCTTCTCTTTTTTTCACCTGGTTCTTGGCTGACCCACTAGGTGTCTCTAGTACTGAAATCTTGTTGAACTTGTCCATGGTACAGGCT
CCAGGGCTCTGAAGCATCATGATTGAGATCATGGGTGCTTTTGACGTAAAACTGAGTGGAGATAGGAGGTGTACATTTTCCTATGTATAATCTCAGCAGAGCACTCAGGATTCAGCCTGTCTGTGAGA
TTGCTGTCTGTGGCTGTTGACTGCCCTTATTTCATGGGTTACAGAGAGAAAGATGTACCCCTCCTCTTCCTCATCTTTCCTTGGCTCTGAGCTATGCAGGCTCTTCCAGAGCCAGAGGCCTGTGGATA
GATAGGTCAGCTTTAATAGCTCTTGAGTTGAGAATCCTCCCCGTTGTCCTAGAACCACCTTGTGCCATCTGCTCAAGCCTAGAGTCCTCTTTTCTAGCTCCATCTTAACTATGCAGAATAACTGTTTG
CTTCCTTTTTTTGTCTTCCAAAATTCACTGTCATGGAGGGATGAGGAAATGTTGTAGCTTATATGATTATTTCTTCAGTTTAGACTAGTGAACCCATCCTGTGATGTACTTGTATGTTTTATGTAGAT
TTCCCTCCTGTTCTTTAGAGTCAGTGCTGAACAGGCTATACCCAGTAAAAATAGGAGCTGGTTTTATAGTCTTCTACCACAGGGACTTAGCAGGAACAGCCCCTGAGGTGACCAGGCTAGCAAATGTC
ACAGCAGATGGTTGAGGGCAGGTTACCATCTCCAGGGGTTTCACTTGGCGTTAGAAACTTACAGCCATAGTTTGAGCTCAGTACTTCTTTAGATGGCTGCTTCCTGGGATTTTTTATTTTTTTTATTT
TTTGTCTTCTTTCCCACTTATGAATTTTGTTTCTTTCTTTCTTTTTTTTTTTTTTTAATTGTCTTGACTGCCCAGTAGCAGCCTTACACTAAAGCATGGCTGAGCTTAGAGCTCCCAAGGGGTCTTAG
CAGACCCTTAGCTATTTCTCTTCCTCCGTCAGTCAAGTGTCTAAGTCGGGGTAACCTACCAGCCTGTCCTGGGTCTCATGTCTAGTATATGTGGAGGTTCTTTTCCAGTTTCTTAACCCTCATGTCTG
CTTCTCTTGAGTCTTTGTTTTCTTAGCAGGAACTTAGTACTGGGGACCTGAATGATGCAGGGCACCACCAGAACCATCGTAGGAAAGCAGCACTGAAATTAGGCACAGCAGGACAACCCCAGATGCCT
CAGTAGTTGGTTTTCAGTTTCAGAAAGCAAAGCAGCTGCTCATGCTGCAGCTTCCCTTACAGTCAAGGGAGACGGTACCTGCACTGTCATCACTGTCAGTGGTCACCGCCTTGACCAATGCCTTCCAC
ACTTACCTGAACCAGAACCAGATACTATAGAGGGTATCAATTAACCCTTTTTGACATCTGTGATGTGTCATAGAGGGTTCTCTGGTCATGTCTACTTGGGGTTCTATATGCCTCTTGTGTTTGGATGT
CAATTCCTGTCTCTAGGTTTAGGAAATTTTGTGATATAATTTCATTAAATAATTTGACTAATTCCTTTTGAATTTATCTCAGATTCTCCTTCTTCCCAGTGGGTTCTGAGGTCTTTAAGTATATCCCA
AGCTTCTTGAAAATACTGGTCATGCGCTCTCGCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTCCCCCCCCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTCTCA
ACTTTGTGCTCCTCTGCAGAACTGCATGGTCTTATCTCTTGGGGAGGCTTTTCACTTGGTTGTTTCTTTCATGTTAATTTCTGTCTCGTTCCTTTTCCATGTTTGAATGCCCTCACTAAAATCTCCCT
CCATGTATCTGACTTTCTCCTCCAACTTACCTACTGTTTTGTTCATTTAGGAGGTTTTATATACAGTCCCTAGTTCACTCATGTGTATTTGAGACTTCTACTCTGAATTCTTTCTCAGACATCTCAGT
ACCTTTGGTTTTCATTAGGAGAGGTTTGTAGTGTGTCCTGGTCCGCTGTTGGCCCATGTTCTTTGTCCTTCTCTATGGTGTTTTGTACATCAGTCAGGATGGATATGTCCTCCAGTTTTAACTCTTCT
TCCCCAACTCTGTTTTGTTTTATGTAATTGAGCCCTTCTTCAGAGCTCTATCAGGAAGGAGCTGAGAGCGATGTCTTAGACCCATGAGTGGTCAGAGGCCTGGTCTGTGCTCTTACCGCCCACTCCAT
ATAACACAGAGTGTTCAGAGTTCCAGTGCCAGGAAGCCTCCCAAAACACAGGGAGAGCTAGAAAGGACATGGCTCCTTCACTCCCTTCCTGTTGGCTGAATACGCCAAATCTGTCCACCTCTTTCCTC
CACTCCTGTCCATGGTTATAAACAGCAGACCACATATTAAAGGGAGCTGTGCTGGTGAACCTTGCCTCCTGCCTGCCTTTCCTCTCCCATCTCCTCAGGGACCTGCCCTCCAGTACAGTCATCCTGAG
AGATATAACTATACTTTTTACAGCCTGAACCACCAAAGAGACACAACACACAATTCTTCCTCTGGCTTCTGAGAGGCTCCTTAAAGGTGCTAACTCCTGAGATCACTCTCCCCAGTGTGTCCCCTTTC
ATAACTGTCTTCCCATCCTCAGAACACATTTCCAATAATATTATCGATTGTACCCACCAAAAAGAAATATGTACTTCTTTTGAAAAGAAAATGGTAGTCTGTCTAGACTCATCTTGCAGCTATGCCAC
ACAGGCCTTTGTTGATGTGCTTTCTCCTCTTTAGACATGTTTGACCAGGGTGGGAGCTGTGGTAGGATAGGACTGGTGAGGATCCTAAGACCTATCAGAAGACCCCACCCCACTCCAGTCCAACTAGA
CATTCTTCCTACAGAGTCTGTTTCTGTCTATATACATGCACATGCACATGCACATGCACAGACAAATCTCCTACTCCACCAGAGTGGTGACCACAGGAATGAGCTCAGTGCTTGCTGGCCACATCCCC
ACCTTCTGCACCTTTAAGGTAAAATCCTACGCTAGAATGAACAAAGGCTTGTGAAAGTAGGGCAGATTAAGGCAGCTTATATCCTTGTAGGTGCAAGTTTCTATTTCAGCTACTAGATGTTTTGGTTT
TGTTTTGTTTTTTAGAGCTGGTAGGCTATAAGCCAGCTATAAGGCATTAGTTGTTAAGTAGCTGTGAGCACTGTTTCCTTGACTTCACCTTAGGGCAGTTGCTTTCAGAACATGGTCCAGGAGCAACA
GTAGCAGCAACATCACCTAGAGAGCTTGCTAGAAATGCACACTCTTTGTCATCCCAACCTCCTGAGTTGGCCACTCTGAAGGTGAGCTTTAACTAGCAGTCTCTGCTGCTGGTCCATACTAATGTGTG
AGCATCCCTAGAAGACAGACTGGGAACATCTTAGCTCTGTGGTGACACGGATTACTTTAAATGCCTTTTCTGCCTTAGAAATGATGTTTTCCCTTCCCTCCACTTCCATTAAAACAGCCACCAACAAT
ATCACTCACCTCAAATTTTTGGTCTTCCTTCTAGTCTTAAGCTCTAAAACATTTGCCTGTATTGGTCTGGGCAGAACTTACTCTTATTTCCTTGCAGGCTACTAGTTGTGCATTCTTGGTGACATTAA
CCAGCAGGAAGGCCAGGAGTGGTGGTGGCCCAAGCCTTTGATCCCAGCACTTGTGAGGGAAGTGAGGGAAGCAGATCTCTTTGTGGTCAAGACCAGCCTGGTCTACAGAGGGAGTTCAAAGCCAATCA
TAGCTATGCACTGAGATCCTGTCTCAAAACAAACAAAATCAGCAGAGCCTTAGTTGTCCATTCTTTCCTCTGCGCGCGCGCGCACACGCACACGCACACACACACACACACACACACACACACACATC
TCTTGCAGGAAGATTAGCCTCCAACCCAACAGTGGAGCCTTCTGCATCCTGATAGAGTGTATGTTGAGAAGAAAGCCATGTGTATCTATGAATATATCTCTCCTGTATCCTTTGACTTGTAGCAATAC
CTCTCCATCCTCAAGGAGCTCAACCTAGGCTGGGTCTCCCCAGGCCCCAGTGGTAGACTCTGATGGGTGGGAGGATACAGTGCTCTGGGCTGTTTTGTTACAAAAGTGTCTTCTGTCCTTTCCCCCCA
CCCAATTCAGCATGAACCCTGTGAGCAGGCTCTCACAATCTCCTGGGGCGGGGCTGAGGCAGGGGCTTTCAGCTCTTCTCCATAACCATCCCTTCTTCCTTCCCCCATGCCATTTAGCAGTTATCACC
CAGCCTTGCCTTCTCCCTCCATCCTTTGCCCTGACATATACTGTGCCTTATTTATGCTGCAAATATAACATTAAACTATCAAGAGAATCA

hide sequence

RefSeq Acc Id:

XM_008765747 ⟹ XP_008763969

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,537,351 - 135,629,362 (-)	NCBI
mRatBN7.2	7	133,660,491 - 133,750,870 (-)	NCBI
Rnor_6.0	7	144,131,382 - 144,223,463 (-)	NCBI

Sequence:

show sequence

GCGAGAAGTGAACACGCCTGGCCGGACGGGAGGAAAGTATCTGCTCCGCTGAGGGGGGAAAGGAGGAGCAGGAGACAGATTGTGGGACCGAGCGCGGGCGGGCGGGAGGCGCCGGAGCTACCAGCGGG
TGAGTCCTGTTAACATTAGCTAGTCCGTGGCCTGACAGGAGTCTCCCCTTCTACTCTGGCCAGTCCCAGCGTCCCGGGCCGGGGTCTCCCCTCCCAGTCTGTTGGACGGGGGCGCTGAGGCGGTGGCC
AGGCCTGTCTGAGGAAGAGGGTGGGGCATAGGCTAAAGACAACCAATAGGAGAGAAGGAAGCCACAATTGGCGGCCATGAGCGCTAATGGGAGATCGCCTTTACCTTGCGGAGTGCCGCCCTCTTCTC
TTCTCCCGCCTCCTTCCTTTTGGAGGAAGGCGGGGCCAGAGGACTGAAGTGTGGGGAGAACTTGGGCTCTGCTCTGCTTTATGAAATATGGGAGACGACAGACCGTTTGTGTGCAGTGCCCCAGGCTG
TGGACAGAGATTTACAAATGAGGACCACCTGGCAGTTCATAAACATAAGCATGAGATGACCCTGAAGTTCGGCCCGGCCCGGACGGACTCTGTCATCATTGCAGATCAAACACCTACTCCAACAAGAT
TCCTGAAGAACTGTGAGGAGGTGGGGCTCTTCAATGAATTAGCTAGTTCCTTTGAACATGAATTTAAGAAAGCTTCTGATGATGATGAAAAAAAGAGTGCTGCTGGGCCTCTAGACATGTCTCTGCCT
TCTACACCAGACATCAAAGTCAAGGAGGAAGAGCCAGTGGAGGTGGACTCATCACCCCCCGACAGTCCTGCTTCCTGCCCCTGCTCCCCGCCACTGAAAGACAAGGAAGTTGCCACAAAACCTGTTGT
GATCTCTACCCCTACACCCACCATCGTACGTCCTGGCTCCCTGCCTCTGCACTTAGGTTATGATCCACTTCATCCAACTCTTCCTTCCCCAACCTCTGTCATCACACAGGCTCCACCATCCAACAGGC
AAATAGGATCTCCTACTGGCTCCCTCCCTCTCGTCATGCATCTTGCTAATGGACAGACCATGCCAATGCTGCCAGGGCCTCCAGTACAGATGCCTTCTGTTATTTCGCTGGCCAGACCTGTTTCCATG
GTGCCCAACATTCCTGGTATACCTGGCCCACCAGTTAACAATAGTGGCTCTATTTCTCCCTCTGGCCACCCTATGCCGTCAGAAGCCAAAATGAGACTAAAAGCCACATTGACCCACCAAGTTTCTTC
AATCAATGGAGGTTGTGGAATGGTGGTAGGCACTGCAAGCACCATGGTGACAGCCCGTCCAGAGCAGAACCAGATCCTCATCCAGCACCCGGATGCCCCATCCCCTGCCCAGCCACAGGTGTCTCCAG
CTCAGCCCACCCCTAGCACAGGGGGACGGCGTCGGCGCACAGTGGATGAAGATCCAGATGAGCGGCGGCAGCGATTTTTAGAGCGGAACAGAGCTGCAGCCTCCCGATGCCGCCAAAAGCGAAAGCTG
TGGGTCTCCTCCCTGGAAAAGAAGGCAGAAGAACTTACTTCTCAGAACATTCAGCTGAGTAATGAAGTCACATTACTACGCAATGAGGTGGCTCAGTTGAAACAGCTACTGTTAGCTCATAAAGACTG
CCCAGTCACTGCACTACAGAAAAAGACTCAAGGCTACCTAGAAAGTCCCAAGGAAAGCTCAGAGCCAACGGGTTCTCCAGCCCCAGTGATTCAGCACAGTTCCGCAACAGCCCCTAGCAATGGCCTTA
GTGTTCGATCTGCAGCTGAAGCTGTGGCCACCTCGGTCCTCACTCAGATGGCCAGCCAAAGGACAGAACTGAGCATGCCCATACAGTCACATGTGATCATGACCCCACAGTCACAGTCTGCGGGCAGA
TGATGCCTCCCATGATGGAGAGGTCCCCAGCCAGAGCTCGCCAGCCTGAGCCAAAAGAGAGATCAACTTATCCCTCCTGTCTGCCTTGGAATTGGCAGTATGGAGAGGGAGAAATTGTGTGTTGTGAG
TATGGACAGATGTGGGGCTTTTCTCTTTAGCCACATGATCATGTACAATTAACACCTGTACAACGGGCTTTTGGCCCCAAAGCCACATAGATCATCCCCCAAGGGTAGGGTTTCTTATGATCCTACAA
CCAAAGGCCTTTCCACATGGTCTGAGCAATCACCCCAGCCCTGATGCATGTGTGCCTCTCTTAACACTAACCCTTGCACTTGTAGGTTTGGGGTTTCTCAGTGTCCTCTCCTCCCCTTGAGCTGTGGC
TGATACCTTCTTATCTCTTACTAGCATGCCACTTCCTGCCAGATAGAGGGAGACGAGATTTGATGGCGTGTTACTTGCTGTCCCATCCCCAGCCACCCCATGCACTCAGGACTTTGTCCCCAACAGCT
GCTTATTTGTCTCTTCCCCTTCTAAGCGACAGTGAAAACACTCACTTGTTGAGAATGTAATGCATTTAATGTGTGAGGTAGCAGTGCTTCCCGCCTCTTCCCTGGGCTCTACTCCTGTCTGCTACCAA
AAACAAACACAGACAGAAAAAGCAAAACTCTGAGAGTTTGAATCATTTTTCAGTTCCAAATCTATCGGTACCTCATTTCGTCTCTTGACTTTCCTTAGTCTAGTGGTGGGGTCTTTCCTACTTCCCCA
CTCTGCCTTGGAAACCTCATCTTGTGGCCTTATTGTTAGTGGCAATGAAAAGGGAGAGAGCCGGGGATCTAACTGGGCCTCCCTGTCTCCTTCCCTACCCTCCAGTTCTAATCATCAGGGCAGACAGG
AACAGTGTAACTTAAACTTGTTCCATCAGGTTACTGGATTAACTGATTCTTTTATGTTTTACAAGAGTTTACTGGCCAAAGTCTACATATTGTCATCTTTGGTCACCTGTGCTCCTGCCTCTCCACCC
TGCTTCCCTGTCCATGTCACTGCCTGTTTCCACTAGAATTTCTTTAGCTCAGCCCTCCTCAGAGTTGTCAGACAGAAGCTGCCTTCATTCTCTGTCCCTCCTGCAGCTCTCAGCCTCCCTTCTTTCCT
AAGGTATGTCTTGTACCCACCAGTGTCCAGCACTCTCCCAGCTACCTTCTCTTTTTTTCACCTGGTTCTTGGCTGACCCACTAGGTGTCTCTAGTACTGAAATCTTGTTGAACTTGTCCATGGTACAG
GCTCCAGGGCTCTGAAGCATCATGATTGAGATCATGGGTGCTTTTGACGTAAAACTGAGTGGAGATAGGAGGTGTACATTTTCCTATGTATAATCTCAGCAGAGCACTCAGGATTCAGCCTGTCTGTG
AGATTGCTGTCTGTGGCTGTTGACTGCCCTTATTTCATGGGTTACAGAGAGAAAGATGTACCCCTCCTCTTCCTCATCTTTCCTTGGCTCTGAGCTATGCAGGCTCTTCCAGAGCCAGAGGCCTGTGG
ATAGATAGGTCAGCTTTAATAGCTCTTGAGTTGAGAATCCTCCCCGTTGTCCTAGAACCACCTTGTGCCATCTGCTCAAGCCTAGAGTCCTCTTTTCTAGCTCCATCTTAACTATGCAGAATAACTGT
TTGCTTCCTTTTTTTGTCTTCCAAAATTCACTGTCATGGAGGGATGAGGAAATGTTGTAGCTTATATGATTATTTCTTCAGTTTAGACTAGTGAACCCATCCTGTGATGTACTTGTATGTTTTATGTA
GATTTCCCTCCTGTTCTTTAGAGTCAGTGCTGAACAGGCTATACCCAGTAAAAATAGGAGCTGGTTTTATAGTCTTCTACCACAGGGACTTAGCAGGAACAGCCCCTGAGGTGACCAGGCTAGCAAAT
GTCACAGCAGATGGTTGAGGGCAGGTTACCATCTCCAGGGGTTTCACTTGGCGTTAGAAACTTACAGCCATAGTTTGAGCTCAGTACTTCTTTAGATGGCTGCTTCCTGGGATTTTTTATTTTTTTTA
TTTTTTGTCTTCTTTCCCACTTATGAATTTTGTTTCTTTCTTTCTTTTTTTTTTTTTTTAATTGTCTTGACTGCCCAGTAGCAGCCTTACACTAAAGCATGGCTGAGCTTAGAGCTCCCAAGGGGTCT
TAGCAGACCCTTAGCTATTTCTCTTCCTCCGTCAGTCAAGTGTCTAAGTCGGGGTAACCTACCAGCCTGTCCTGGGTCTCATGTCTAGTATATGTGGAGGTTCTTTTCCAGTTTCTTAACCCTCATGT
CTGCTTCTCTTGAGTCTTTGTTTTCTTAGCAGGAACTTAGTACTGGGGACCTGAATGATGCAGGGCACCACCAGAACCATCGTAGGAAAGCAGCACTGAAATTAGGCACAGCAGGACAACCCCAGATG
CCTCAGTAGTTGGTTTTCAGTTTCAGAAAGCAAAGCAGCTGCTCATGCTGCAGCTTCCCTTACAGTCAAGGGAGACGGTACCTGCACTGTCATCACTGTCAGTGGTCACCGCCTTGACCAATGCCTTC
CACACTTACCTGAACCAGAACCAGATACTATAGAGGGTATCAATTAACCCTTTTTGACATCTGTGATGTGTCATAGAGGGTTCTCTGGTCATGTCTACTTGGGGTTCTATATGCCTCTTGTGTTTGGA
TGTCAATTCCTGTCTCTAGGTTTAGGAAATTTTGTGATATAATTTCATTAAATAATTTGACTAATTCCTTTTGAATTTATCTCAGATTCTCCTTCTTCCCAGTGGGTTCTGAGGTCTTTAAGTATATC
CCAAGCTTCTTGAAAATACTGGTCATGCGCTCTCGCTCTCTCTCTCTCTCTCTCCCTCTCTCCCTCCCCCCCCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTC
TCAACTTTGTGCTCCTCTGCAGAACTGCATGGTCTTATCTCTTGGGGAGGCTTTTCACTTGGTTGTTTCTTTCATGTTAATTTCTGTCTCGTTCCTTTTCCATGTTTGAATGCCCTCACTAAAATCTC
CCTCCATGTATCTGACTTTCTCCTCCAACTTACCTACTGTTTTGTTCATTTAGGAGGTTTTATATACAGTCCCTAGTTCACTCATGTGTATTTGAGACTTCTACTCTGAATTCTTTCTCAGACATCTC
AGTACCTTTGGTTTTCATTAGGAGAGGTTTGTAGTGTGTCCTGGTCCGCTGTTGGCCCATGTTCTTTGTCCTTCTCTATGGTGTTTTGTACATCAGTCAGGATGGATATGTCCTCCAGTTTTAACTCT
TCTTCCCCAACTCTGTTTTGTTTTATGTAATTGAGCCCTTCTTCAGAGCTCTATCAGGAAGGAGCTGAGAGCGATGTCTTAGACCCATGAGTGGTCAGAGGCCTGGTCTGTGCTCTTACCGCCCACTC
CATATAACACAGAGTGTTCAGAGTTCCAGTGCCAGGAAGCCTCCCAAAACACAGGGAGAGCTAGAAAGGACATGGCTCCTTCACTCCCTTCCTGTTGGCTGAATACGCCAAATCTGTCCACCTCTTTC
CTCCACTCCTGTCCATGGTTATAAACAGCAGACCACATATTAAAGGGAGCTGTGCTGGTGAACCTTGCCTCCTGCCTGCCTTTCCTCTCCCATCTCCTCAGGGACCTGCCCTCCAGTACAGTCATCCT
GAGAGATATAACTATACTTTTTACAGCCTGAACCACCAAAGAGACACAACACACAATTCTTCCTCTGGCTTCTGAGAGGCTCCTTAAAGGTGCTAACTCCTGAGATCACTCTCCCCAGTGTGTCCCCT
TTCATAACTGTCTTCCCATCCTCAGAACACATTTCCAATAATATTATCGATTGTACCCACCAAAAAGAAATATGTACTTCTTTTGAAAAGAAAATGGTAGTCTGTCTAGACTCATCTTGCAGCTATGC
CACACAGGCCTTTGTTGATGTGCTTTCTCCTCTTTAGACATGTTTGACCAGGGTGGGAGCTGTGGTAGGATAGGACTGGTGAGGATCCTAAGACCTATCAGAAGACCCCACCCCACTCCAGTCCAACT
AGACATTCTTCCTACAGAGTCTGTTTCTGTCTATATACATGCACATGCACATGCACATGCACAGACAAATCTCCTACTCCACCAGAGTGGTGACCACAGGAATGAGCTCAGTGCTTGCTGGCCACATC
CCCACCTTCTGCACCTTTAAGGTAAAATCCTACGCTAGAATGAACAAAGGCTTGTGAAAGTAGGGCAGATTAAGGCAGCTTATATCCTTGTAGGTGCAAGTTTCTATTTCAGCTACTAGATGTTTTGG
TTTTGTTTTGTTTTTTAGAGCTGGTAGGCTATAAGCCAGCTATAAGGCATTAGTTGTTAAGTAGCTGTGAGCACTGTTTCCTTGACTTCACCTTAGGGCAGTTGCTTTCAGAACATGGTCCAGGAGCA
ACAGTAGCAGCAACATCACCTAGAGAGCTTGCTAGAAATGCACACTCTTTGTCATCCCAACCTCCTGAGTTGGCCACTCTGAAGGTGAGCTTTAACTAGCAGTCTCTGCTGCTGGTCCATACTAATGT
GTGAGCATCCCTAGAAGACAGACTGGGAACATCTTAGCTCTGTGGTGACACGGATTACTTTAAATGCCTTTTCTGCCTTAGAAATGATGTTTTCCCTTCCCTCCACTTCCATTAAAACAGCCACCAAC
AATATCACTCACCTCAAATTTTTGGTCTTCCTTCTAGTCTTAAGCTCTAAAACATTTGCCTGTATTGGTCTGGGCAGAACTTACTCTTATTTCCTTGCAGGCTACTAGTTGTGCATTCTTGGTGACAT
TAACCAGCAGGAAGGCCAGGAGTGGTGGTGGCCCAAGCCTTTGATCCCAGCACTTGTGAGGGAAGTGAGGGAAGCAGATCTCTTTGTGGTCAAGACCAGCCTGGTCTACAGAGGGAGTTCAAAGCCAA
TCATAGCTATGCACTGAGATCCTGTCTCAAAACAAACAAAATCAGCAGAGCCTTAGTTGTCCATTCTTTCCTCTGCGCGCGCGCGCACACGCACACGCACACACACACACACACACACACACACACAC
ATCTCTTGCAGGAAGATTAGCCTCCAACCCAACAGTGGAGCCTTCTGCATCCTGATAGAGTGTATGTTGAGAAGAAAGCCATGTGTATCTATGAATATATCTCTCCTGTATCCTTTGACTTGTAGCAA
TACCTCTCCATCCTCAAGGAGCTCAACCTAGGCTGGGTCTCCCCAGGCCCCAGTGGTAGACTCTGATGGGTGGGAGGATACAGTGCTCTGGGCTGTTTTGTTACAAAAGTGTCTTCTGTCCTTTCCCC
CCACCCAATTCAGCATGAACCCTGTGAGCAGGCTCTCACAATCTCCTGGGGCGGGGCTGAGGCAGGGGCTTTCAGCTCTTCTCCATAACCATCCCTTCTTCCTTCCCCCATGCCATTTAGCAGTTATC
ACCCAGCCTTGCCTTCTCCCTCCATCCTTTGCCCTGACATATACTGTGCCTTATTTATGCTGCAAATATAACATTAAACTATCAAGAGAATCA

hide sequence

RefSeq Acc Id:

XM_063263681 ⟹ XP_063119751

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,537,351 - 135,649,188 (-)	NCBI

RefSeq Acc Id:

XM_063263683 ⟹ XP_063119753

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	7	135,537,351 - 135,599,872 (-)	NCBI


Protein RefSeqs	NP_001101585	(Get FASTA)	NCBI Sequence Viewer
	NP_001421613	(Get FASTA)	NCBI Sequence Viewer
	NP_001421614	(Get FASTA)	NCBI Sequence Viewer
	NP_001421615	(Get FASTA)	NCBI Sequence Viewer
	XP_006242458	(Get FASTA)	NCBI Sequence Viewer
	XP_008763969	(Get FASTA)	NCBI Sequence Viewer
	XP_063119751	(Get FASTA)	NCBI Sequence Viewer
	XP_063119753	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI58606	(Get FASTA)	NCBI Sequence Viewer
	EDL86819	(Get FASTA)	NCBI Sequence Viewer
	EDL86820	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000020527.5
	ENSRNOP00000077316.1
	ENSRNOP00000085221
	ENSRNOP00000085221.1

RefSeq Acc Id:

NP_001101585 ⟸ NM_001108115

- UniProtKB:

G3V7X9 (UniProtKB/TrEMBL), A6KCX2 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGDDRPFVCSAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKASDDDEKKASSAAGPLDMSLPSTPDIKVKEEEPVEVDSSPPDSPASCP
CSPPLKDKEVATKPVVISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQIGSPTGSLPLVMHLANGQTMPMLPGPPVQMPSVISLARPVSMVPNIPGIPGPPVNNSGSISPSGHPMPS
EAKMRLKATLTHQVSSINGGCGMVVGTASTMVTARPEQNQILIQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLR
NEVAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSATAPSNGLSVRSAAEAVATSVLTQMASQRTELSMPIQSHVIMTPQSQSAGR

hide sequence

RefSeq Acc Id:

XP_006242458 ⟸ XM_006242396

- Peptide Label:

isoform X1

- Sequence:

show sequence

MGDDRPFVCSAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKASDDDEKKSAAGPLDMSLPSTPDIKVKEEEPVEVDSSPPDSPASCPCS
PPLKDKEVATKPVVISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQIGSPTGSLPLVMHLANGQTMPMLPGPPVQMPSVISLARPVSMVPNIPGIPGPPVNNSGSISPSGHPMPSEA
KMRLKATLTHQVSSINGGCGMVVGTASTMVTARPEQNQILIQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNE
VAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSATAPSNGLSVRSAAEAVATSVLTQMASQRTELSMPIQSHVIMTPQSQSAGR

hide sequence

RefSeq Acc Id:

XP_008763969 ⟸ XM_008765747

- Peptide Label:

isoform X1

- Sequence:

show sequence

MGDDRPFVCSAPGCGQRFTNEDHLAVHKHKHEMTLKFGPARTDSVIIADQTPTPTRFLKNCEEVGLFNELASSFEHEFKKASDDDEKKSAAGPLDMSLPSTPDIKVKEEEPVEVDSSPPDSPASCPCS
PPLKDKEVATKPVVISTPTPTIVRPGSLPLHLGYDPLHPTLPSPTSVITQAPPSNRQIGSPTGSLPLVMHLANGQTMPMLPGPPVQMPSVISLARPVSMVPNIPGIPGPPVNNSGSISPSGHPMPSEA
KMRLKATLTHQVSSINGGCGMVVGTASTMVTARPEQNQILIQHPDAPSPAQPQVSPAQPTPSTGGRRRRTVDEDPDERRQRFLERNRAAASRCRQKRKLWVSSLEKKAEELTSQNIQLSNEVTLLRNE
VAQLKQLLLAHKDCPVTALQKKTQGYLESPKESSEPTGSPAPVIQHSSATAPSNGLSVRSAAEAVATSVLTQMASQRTELSMPIQSHVIMTPQSQSAGR

hide sequence

Ensembl Acc Id:

ENSRNOP00000020527 ⟸ ENSRNOT00000020527

Ensembl Acc Id:

ENSRNOP00000077316 ⟸ ENSRNOT00000100308

Protein Domains

bZIP C2H2-type

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-G3V7X9-F1-model_v2	AlphaFold	G3V7X9	1-485	view protein structure

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

RGD ID:

13695705

Promoter ID:

EPDNEW_R6230

Type:

multiple initiation site

Name:

Atf7_1

Description:

activating transcription factor 7

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	7	144,223,461 - 144,223,521	EPDNEW

Database	Acc Id	Source(s)
BioCyc Gene	G2FUF-31930	BioCyc
Ensembl Genes	ENSRNOG00000015269	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000020527.5	UniProtKB/TrEMBL
	ENSRNOT00000100308.1	UniProtKB/TrEMBL
	ENSRNOT00000106850	ENTREZGENE
	ENSRNOT00000106850.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.170	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7135404	IMAGE-MGC_LOAD
InterPro	bZIP	UniProtKB/TrEMBL
	bZIP_sf	UniProtKB/TrEMBL
	bZIP_transcription_factors	UniProtKB/TrEMBL
	TF_cAMP-dep	UniProtKB/TrEMBL
	Znf_C2H2/integrase_DNA-bd	UniProtKB/TrEMBL
	Znf_C2H2_sf	UniProtKB/TrEMBL
KEGG Report	rno:315333	UniProtKB/TrEMBL
MGC_CLONE	MGC:187467	IMAGE-MGC_LOAD
NCBI Gene	315333	ENTREZGENE
PANTHER	CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN	UniProtKB/TrEMBL
Pfam	bZIP_1	UniProtKB/TrEMBL
PhenoGen	Atf7	PhenoGen
PIRSF	ATF2_CRE-BP1	UniProtKB/TrEMBL
PROSITE	BZIP	UniProtKB/TrEMBL
	BZIP_BASIC	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_1	UniProtKB/TrEMBL
	ZINC_FINGER_C2H2_2	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000015269	RatGTEx
SMART	BRLZ	UniProtKB/TrEMBL
	ZnF_C2H2	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57667	UniProtKB/TrEMBL
	SSF57959	UniProtKB/TrEMBL
UniProt	A0A8I5Y7N1_RAT	UniProtKB/TrEMBL
	A0A8I5ZZM2_RAT	UniProtKB/TrEMBL
	A6KCX2	ENTREZGENE, UniProtKB/TrEMBL
	B0BMY0	ENTREZGENE, UniProtKB/TrEMBL
	G3V7X9	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-30	Atf7	activating transcription factor 7	Atf7_predicted	activating transcription factor 7 (predicted)	'predicted' is removed	2292626	APPROVED
2005-01-12	Atf7_predicted	activating transcription factor 7 (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar