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Gene: Ccdc150 (coiled-coil domain containing 150) Rattus norvegicus

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Symbol:

Ccdc150

Name:

coiled-coil domain containing 150

RGD ID:

1304775

Description:

Orthologous to human CCDC150 (coiled-coil domain containing 150); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

coiled-coil domain-containing protein 150; LOC316399; RGD1304775; similar to hypothetical protein DKFZp434P055

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CCDC150 (coiled-coil domain containing 150)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Treefam
Mus musculus (house mouse):	Ccdc150 (coiled-coil domain containing 150)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ccdc150 (coiled-coil domain containing 150)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CCDC150 (coiled-coil domain containing 150)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CCDC150 (coiled-coil domain containing 150)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ccdc150 (coiled-coil domain containing 150)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	CCDC150 (coiled-coil domain containing 150)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CCDC150 (coiled-coil domain containing 150)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ccdc150 (coiled-coil domain containing 150)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Ccdc150 (coiled-coil domain containing 150)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Mus musculus (house mouse):	Ccdc150 (coiled-coil domain containing 150)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	CCDC150 (coiled-coil domain containing 150)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	si:dkey-75b17.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ccdc150	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	ccdc150	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	63,287,962 - 63,403,644 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	63,288,000 - 63,391,670 (+)	Ensembl				GRCr8
mRatBN7.2	9	55,793,544 - 55,897,341 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	55,793,551 - 55,897,224 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	64,326,803 - 64,413,618 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	69,442,591 - 69,529,406 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	67,734,265 - 67,821,301 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	60,883,966 - 60,989,369 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	60,883,981 - 60,987,349 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	60,568,027 - 60,688,178 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	53,085,922 - 53,172,920 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	53,300,125 - 53,386,830 (+)	NCBI		Celera
RGSC_v3.1	9	53,028,413 - 53,174,334 (+)	NCBI
Cytogenetic Map	9	q31	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,2-dimethylhydrazine (EXP,ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP)

6-propyl-2-thiouracil (EXP)

acrylamide (EXP)

all-trans-retinoic acid (ISO)

arsane (ISO)

arsenic atom (ISO)

arsenous acid (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

cadmium dichloride (ISO)

carbon nanotube (ISO)

cyclosporin A (ISO)

diarsenic trioxide (ISO)

dicrotophos (ISO)

hydrogen peroxide (ISO)

methyl methanesulfonate (ISO)

nitrofen (EXP)

okadaic acid (ISO)

ozone (ISO)

paracetamol (EXP,ISO)

perfluorooctanoic acid (ISO)

pirinixic acid (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

sunitinib (ISO)

titanium dioxide (ISO)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Molecular Function

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data

Ccdc150
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	63,287,962 - 63,403,644 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	9	63,288,000 - 63,391,670 (+)	Ensembl				GRCr8
mRatBN7.2	9	55,793,544 - 55,897,341 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	55,793,551 - 55,897,224 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	9	64,326,803 - 64,413,618 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	9	69,442,591 - 69,529,406 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	9	67,734,265 - 67,821,301 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	9	60,883,966 - 60,989,369 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	9	60,883,981 - 60,987,349 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	9	60,568,027 - 60,688,178 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	9	53,085,922 - 53,172,920 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	9	53,300,125 - 53,386,830 (+)	NCBI		Celera
RGSC_v3.1	9	53,028,413 - 53,174,334 (+)	NCBI
Cytogenetic Map	9	q31	NCBI

CCDC150
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	196,639,715 - 196,732,806 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	196,639,554 - 196,763,490 (+)	Ensembl			hg38	GRCh38
GRCh37	2	197,504,439 - 197,597,525 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	197,212,601 - 197,305,775 (+)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	2	191,260,248 - 191,353,407 (+)	NCBI		Celera
Cytogenetic Map	2	q33.1	NCBI
HuRef	2	189,356,685 - 189,450,073 (+)	NCBI		HuRef
CHM1_1	2	197,510,246 - 197,603,398 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	197,123,662 - 197,216,860 (+)	NCBI		T2T-CHM13v2.0

Ccdc150
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	54,289,820 - 54,407,893 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	54,289,842 - 54,407,886 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	1	54,250,661 - 54,368,727 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	54,250,683 - 54,368,727 (+)	Ensembl			mm10	GRCm38
MGSCv37	1	54,307,527 - 54,425,571 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	1	54,195,228 - 54,313,272 (+)	NCBI		MGSCv36	mm8
Celera	1	54,795,551 - 54,906,761 (+)	NCBI		Celera
Cytogenetic Map	1	C1.1	NCBI
cM Map	1	27.06	NCBI

Ccdc150
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955403	3,646,185 - 3,720,401 (-)	Ensembl
ChiLan1.0	NW_004955403	3,645,202 - 3,720,343 (-)	NCBI	ChiLan1.0	ChiLan1.0

CCDC150
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	99,259,713 - 99,352,901 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	99,274,705 - 99,367,892 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	83,884,052 - 83,976,949 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	201,782,561 - 201,875,446 (+)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	201,782,696 - 201,875,211 (+)	Ensembl			panPan2	panpan1.1

CCDC150
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	6,257,000 - 6,336,636 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	6,257,573 - 6,336,606 (+)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	7,205,445 - 7,284,459 (+)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	6,147,146 - 6,226,683 (+)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	6,147,780 - 6,226,653 (+)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	6,146,614 - 6,226,486 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	6,113,648 - 6,192,937 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	6,135,885 - 6,215,412 (+)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Ccdc150
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	154,321,229 - 154,436,759 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936506	2,403,034 - 2,516,712 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CCDC150
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	100,539,414 - 100,634,779 (+)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	15	100,539,393 - 100,634,578 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	111,698,931 - 111,811,326 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CCDC150
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	82,170,501 - 82,265,355 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	82,177,426 - 82,265,318 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666040	117,190,198 - 117,285,423 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ccdc150
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624854	365,354 - 438,170 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Ccdc150
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	4	128,953,485 - 129,014,570 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Ccdc150
617 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	126
Count of miRNA genes:	104
Interacting mature miRNAs:	114
Transcripts:	ENSRNOT00000017859
Prediction methods:	Microtar, Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
2303170	Bp332	Blood pressure QTL 332	3.73	0.027	arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	9	6714888	84474983	Rat
631656	Bp108	Blood pressure QTL 108	5.97	0.0001	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	56047863	101047863	Rat
7411571	Bw138	Body weight QTL 138	14.3	0.001	body mass (VT:0001259)	body weight gain (CMO:0000420)	9	40029925	85029925	Rat
1582203	Gluco19	Glucose level QTL 19	3.3	0.001	blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	9	63376862	108376862	Rat
1300180	Bw14	Body weight QTL 14	3.776		body mass (VT:0001259)	body weight (CMO:0000012)	9	31250432	68875676	Rat
8662828	Vetf6	Vascular elastic tissue fragility QTL 6	3.9		artery integrity trait (VT:0010639)	patent ductus arteriosus score (CMO:0002566)	9	44458256	99506504	Rat
61450	Ciaa3	CIA Autoantibody QTL 3	6.5		blood autoantibody amount (VT:0003725)	calculated serum anti-type 2 collagen antibody titer (CMO:0001279)	9	29567664	74567664	Rat
1598834	Memor11	Memory QTL 11	2.5		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	9	44458256	85262605	Rat
70186	Niddm26	Non-insulin dependent diabetes mellitus QTL 26	3.87		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	9	29567664	83835942	Rat
70218	Cm28	Cardiac mass QTL 28	8.3	0.0001	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	9	41720295	86720295	Rat
7207805	Bmd88	Bone mineral density QTL 88	4		femur mineral mass (VT:0010011)	total volumetric bone mineral density (CMO:0001728)	9	31250432	65651574	Rat
2290450	Scl57	Serum cholesterol level QTL 57	4.15		blood cholesterol amount (VT:0000180)	plasma total cholesterol level (CMO:0000585)	9	44458256	121768150	Rat
1581517	Bp284	Blood pressure QTL 284			arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	9	39220186	84220186	Rat
731164	Uae25	Urinary albumin excretion QTL 25	3.5	0.0001	urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	9	48718864	108376862	Rat
7411656	Foco26	Food consumption QTL 26	9.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	9	40029925	85029925	Rat
1598849	Memor17	Memory QTL 17	2.2		exploratory behavior trait (VT:0010471)	difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)	9	57460497	78547958	Rat
4889943	Bss90	Bone structure and strength QTL 90	4.1		tibia area (VT:1000281)	tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)	9	54506504	99506504	Rat
1641894	Alcrsp12	Alcohol response QTL 12			response to alcohol trait (VT:0010489)	brain neurotensin receptor 1 density (CMO:0002068)	9	34960590	79960590	Rat

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	11	57	162	79	78	47	86	47	6	317	175	11	141	71	92	31	16	16

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001412763	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428848	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428849	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001428850	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006244924	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008767097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596450	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596452	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017596453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083607	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083610	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083611	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039083613	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063267178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488902	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005488907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054598	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054599	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054603	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054604	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_010054605	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_594387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_594388	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_594389	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAXUCZ010000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000017859 ⟹ ENSRNOP00000017859

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,288,004 - 63,391,670 (+)	Ensembl
mRatBN7.2 Ensembl	9	55,793,551 - 55,897,001 (+)	Ensembl
Rnor_6.0 Ensembl	9	60,900,213 - 60,987,151 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000081002 ⟹ ENSRNOP00000072587

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,288,000 - 63,391,670 (+)	Ensembl
mRatBN7.2 Ensembl	9	55,793,551 - 55,897,224 (+)	Ensembl
Rnor_6.0 Ensembl	9	60,883,981 - 60,987,349 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000113546 ⟹ ENSRNOP00000078352

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,346,604 - 63,391,669 (+)	Ensembl
mRatBN7.2 Ensembl	9	55,852,130 - 55,897,224 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000148114 ⟹ ENSRNOP00000109542

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	9	63,288,004 - 63,391,670 (+)	Ensembl

RefSeq Acc Id:

NM_001412763 ⟹ NP_001399692

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,288,002 - 63,391,791 (+)	NCBI
mRatBN7.2	9	55,793,577 - 55,897,341 (+)	NCBI

RefSeq Acc Id:

XM_008767095 ⟹ XP_008765317

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,793,546 - 55,897,218 (+)	NCBI
Rnor_6.0	9	60,883,966 - 60,989,369 (+)	NCBI

Sequence:

show sequence

TCAGGGAGCGCAGAGGGATTCCGGCCAGGGTCCCTCCCCAAGCGGAGGGCCCTGGTGGGCCGGG
AAAACTACACTTCCCGGCATGCCTCACCTCGGGTGCGCCTGCGTACCGGAGCAATCCCGCTGGC
GAGCGGGTTAGTTTAAAGAGCTGTTTTAAGTTCCATGGAAACAAACTTGCTGGCCGCAGGACGG
AGCTACGGACTGGTGGATGGATTAGGGGTGCATATGGAAACCACAGTGTGCAGACCAGTCCTGT
CTCCAACCCACATCAATGCGACAGCTTCAGAAACGTTCACAGTCCTTCAGCAGAAGATGAGAAT
AGTTGAGGAACAAACCAGCTCTCTGAGAGATGACCTAATAATGCTAGGATATGGTGACAGACGA
TGTCAATTACAAACTTCAGACTATTTAGAAGACCCTGTCAGCCAGAAAGTCACTAGTCCTATTC
CAAATGAAGTAGTTTGTCCAGAAAGCAGAGGTATTTTGTGGAAGAACTATGAATTCCTGGCAAA
TCGAATGTGCTATTTGGAGAACCTCATCCAGCCCTTGAAGATGAACATCTTTCACCTACAAACT
GAAAAGGACCTGAATCCACAGAAAGCAGCGTTTCTGAAGGATCAGCTGAACACAATACAGGGGG
AGCACTTCAAGGACCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAACTGAAAGT
TGTTAAGGAGGAAGAAGACAGGGCACAAGATGAAGTGCAGAGGTTGACTGCTACTCTGGAAATT
GCCACAGAGACAAAGAAGAACGCGGCTGTCATTGAGGAGGAGCTAAAGACCACAAAGCGTAAAA
TGAACCTTAAAATTCAAGAGCTCAGGCGACAACTGGCTCAGGAGGAGCATGTCAGGGCGTCTCT
TGAGAAGTCTGCATCATCCATGCTCCTCAAAGTACATGAGATGGAGTCAGCGGTGGAGGCCGAA
CGGCAGCAGGTGCACACTTTGCAGCAGAAGTGCATCGATCTACACAGCTCTATGCAAACAACCC
AAGAACTGCTGGCCCAGGAGCAGCAGAAGAGTAACGGCTTGGAGATGACGGCCTCGCAGCTCAA
GTCTGATCTAATTTCCAGAGATAACCTGATTTACAAGTTGGTTGAAGAAAATAAGAGTACACAA
ATGTCTCTCAAGAAGGAACATGAAGAAAATACTTATTTGAAATCTGAAGTACTGTCCCTTCAAG
ATATATCAGGAAAAGCACAGGTTTTGAATGACCAACTTTCCAAAAAGTGTTCAGAGCTTACCAG
CATGCTTAAGGCTGTTAAACTGGAAAATTCCAGAATTATTGCTGAACATCATGCTACTTTGAAG
GTAGAGCAGAAAATGATAACAGAGACATTTCAAGAGCAAAATTTACTGTTAGACACAGCCCATG
CCAGCATCACAGGCGAGCTCCAAACTGTGCAGAATGATAAAGCGCAACTCCAGATGCATCTAGA
CCATTTAATTCTTGAGCACAATCAGTGTCTCCAGAAAGCACAGGAGGCTGAGAAGAGGACAATG
GCACAAAAAGAACTTCTAGAATCAACTATTGCAAGACTACGAGGTGAACTGGAAGCATCAATGC
AGGAGAAGAAGTCTCTGCTGGAGAAGAATGAATGGTTTCAGAGGGAGCAGGTTAATAAATCAGA
AAAGGGAGTAGCCAAAGAAAAATGCAATTTGGAAAAAGAATTAGCTGAAAGCAAGGAAGACACT
AATGTGTTGAATCAAAACCTGCAGATTCTAGTTGAAGAAAATAAGCATCTGACAGATAAGATGG
CTTCCCTTGAACATCACAAAGCCACTTCTGATTACCAAGGGTTTGCTCAGCAGAAAGTGGAGAA
GGCCTTGGAAAAAATTACTGAGAGTAAAAATAAGCTTGCCTATGAAAAGGGGAAACTCCAGATA
AAAGTCAAACAGCTAGAAGAACAGCTGCACACTTTTACTGAAACCAGGCTGCACAACGACCACC
TACAAAGACAGAATAAGGCTTTAGAGGTCAAGCATGCTCAGATAAAATCTCTTCTTGGGAAAAA
TGAGGAAGAGCTGGCTGAAGCAGTGAAGTGTCGGGATGCTGCCCTGAAAGAAAGCCAGAAGTTG
AAAGGGGACCTGGAGGCATTGGAGGACAGGGAGAACAAGAAGGTGGGTAACTTTCAGAAACAAT
TAGCAGAGGCTAAAGAAGACAACTGCAAAGTCACAATCATGCTGGAAAATGTGCTGGCTTCCCA
CAGTAAGATGCAGGGTGCCCTGGAGAAAGTCCAGATAGAGCTCGGGAGGAGAGATTCAGAGATC
GCAGGCCTCAAGAAGGAAAGGTCTCTAAATCAGCAGCGAGTACAGAAGCTTGAAGCGGAGGTGG
ACCAGTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCACAGCAATGAGATGGAGCCACTACA
GAAGTCTCTAGATGTAACTAGAGAAGATAACAGGAAACTGGCCATGAGCCTAGAGCAGGCTCTC
CAGACAAATGGCCATCTGCAGTCTAAGCTTGATCACCTCCAAGAAAAACTGGAGAGCAAAGAGC
GTGAGCGGCAGAATCTGGAAGCCTTCAAAGAGCGGGTTGCTGAGGAATCCAAAGTAGAAGCAGA
ATTACATGCAGAACGCATTGAAGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGACTGCAAAG
AAAGTATCACATAGGGAAGTTTCTGAGCTGAAGAAAGCTCTTGACGAAGCCAACTTCAGATCTG
TAGAAGTGTCCCGGACAAACCGAGAGCTACGACACAAAGCTACAGAGCTAGAAAAAGTGGTGAA
CAGTAACAAGGAAAAGCTCAAGAACCAACGGGCCCAGATAAGGATGCACTTGTCAGCCAAAGCA
AACAGTGCACAGAACATGGAGAGGATGAAGCAAATAGAAATGGAATTGAGGCAAATGGAGATAA
TTAAGGATCAATATCAGAAAAAGAACTATGAACAGTCATTGAGTATCCAGAGATTTGTATCTGA
AATGAATGCTCTGCAGAAGGAGATGGAGATGTTAGCTAAGAGCCAGTATGAGACCTCAGCGAGA
AATAAACAGCAAGAGTTGAGACTAGTGGCTGAGCGAAAAATAAGGCAGGAGCTAGAAAGCCGAT
GCAAGGACCTGGAAGACACCATCAGACACCTGAGGAAATGTAAAGAAGCAACAGAGAATAAACT
GAAAGAAGCCAGTGTGGAATCTGAACAGATAACAGCTAATCTGGAAGAAGCTCACCGCTGGTTT
AAATGCAGGTTCGATGGATTACAACTTGAGCTGACAAAAAACCGGTTGCAGAGGCTTCCCCGGG
AAGACAGGTGGCTGGAAGAGAATCAAGACATGAGGCATAATATTGCAACCAGCCAATCTGTTCT
ACATCGATGGGAAACTAAACAGAACCTTGGGCTTATGCCCAAGAAGTACCACTCTGACACAGAG
AGGAAGAAGTGACCTGGACAGGAGTCTCCTCCAGAGAAGCCATTCCTCTGTGATTCTGCGGGCC
AGCAAGTGAGGCTGGCCTGTTCTACATTATAAGAACATGATGTATGCTGAAGATTTTGGATTTT
ATCCTTTATGGACTCTTTTACATTACTGCAGAACCAACCCATCTCTTTGTCCCTTTCCCTATTT
TGTTCCAAATAAATTTAAACTAGTTTGTTTTATGATACTAGATGCTGTCCCATGATGTTTGCTA
TGTTCAGAAAGAATTTAGTGTTGAGTGAAATGGCCACAATAATATGTTCTAGATGCATCCTATA
AGATGTTCTCTGGAAATTAAATTATTTGTAAATACAGTAGACACCCTTCTATACCTTCTAAACA
CACACACACACACACACACGTACATGCACATGTGCGCACACACACACACAAATTTCTGAGATGC
CACATGTAGACTATACTTACAGCCACTTTGGTCACTAAAGGGTTGTTTACTGAATAAAGGAGTT
GCACTATTCTAGGAACCTGACTGGTAAGTATGGTTCCCTTTCACAGAAGGAAGGAGCAACTTGA
ACTTTGTTTATTTCAATATTAAATGGTGGGTTTTATAATCTACACTTAACATATATAATGGACT
GGCAGAATATCTTGCTTCTTATGCTGGTCCTACCAAGCCCTAATGTAAGTGTACAATTATGATA
ATGCAGAGAGTAATGACTACAACACAGCCCAGGGTTGCAGTGGCAATTTCTGATGTGAAATGGT
AAAACTCAATTTCTCACTATATTTGAAAGGAGGACTAACTACTCCTGAGCACATTGCTGGCCTT
TTATTGAGGTCGAAGGGACAGGGAATTCAAGCATTAGAGGACTACCTGATTTTGGAGGCGTTCA
TGGGTTAATATATGTATTAGAATTATATGGGCGAGACTGTTCATTGACATTCAAACCAACTCCT
ATTTTTCTGGCTTTCAGAAGTAGGTAACTCTCACTGCTTGGTGGACTTTTGAGAAAGTGTCCAC
TAAAGAAAGAAAGCTACAATGTGTTGCTTGAAGACTTCTGAGAAGTGTTTGTTATCAAGACCGC
ACAATAATCCATTCTTAGGAGGATGGTATTTTATTCTGTGTGCACCCTTTGTTCTTTGTTTCAT
ATTAGAACAGTGACTATATTCACATTTAAGATTGAACAGAAAATACTAAATAACTATCTTTCTG
CTTAGGAGAGATTAACTTTTATGCTCATAACTACTTTTGTGTTATATTTCAAAGTCTCCTCCAA
AATTTTATTTTGAAACTTAATACCATTATAGTAGTTTTTAAGGATTGGAGTCTTCAAAGTTGTA
GATTGTATCATAATAGCCTTTAATAATGGATTCATGTCTTTAAAGGGGGCTGGCGGCAACTGCC
TTCAGCTCTGCTGACCCTTTGCCATTACCATGAGACGATAAGGCACCTAGCATCCCAGAAGACA
CCAGCAATAAGGTGCCCCTGGATGTGGAGAGCAGAGTCCCATCACACACTAACCCTGTCAGCAA
CTCCATCTTGGATTTCCTGGCTTCCAGAACTGTGAGAAATCATTTCTGCTCTTTATAAACTTTC
TACCCAAAGTTATTTTGTTTCAAAAAGCAAACACAAACTGAGACATTTGGTTAAGGAATTTACT
TGGACACTATTGTTATTGGATGCTATTATTCATAGATGTCTTTCCTCAGAAAGATAATTGTGCA
TTAGGTGTGTGTATGTATATGTGTGAGTCTGTGCTTGTGTATGTGTGTGTTTGACAAATATATA
TATATATATACAAATATATATGTAAAAGATGAATGAAATGAATGAAAGTATTAGAGCTTTTAGT
CTTGACTCAGCCAGGAGTCCTATAGATAATTAACCTTGGTCCTGAGCCAACACTAAAGACCTGA
ATTCATATAAGAAGTTCACAATCACTACACATGGGCTATGATCATCTTTGGTGGATAGACATCT
GCTGCCCTAATTACCTATGACAATCACAAGTACATGCCAGAATATTCATGTCCTGATCTAGAAC
AAGAACAATTTTCTTCATTTAGGTATCATCATCAAAAGGTATTGTTATTAACATGTTCATTTAG
ATTACCTATTTGAGTTTGGGAAAGCGAATTATAGTTAGATTGGTGACCATTTCTAGTAAGACTG
TAGTAGTAATTAGTAAGGGAGATGTGATAACTAAATTAAAACTAGACTACCAAA

hide sequence

RefSeq Acc Id:

XM_008767096 ⟹ XP_008765318

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,793,546 - 55,897,218 (+)	NCBI
Rnor_6.0	9	60,883,966 - 60,989,369 (+)	NCBI

Sequence:

show sequence

TCAGGGAGCGCAGAGGGATTCCGGCCAGGGTCCCTCCCCAAGCGGAGGGCCCTGGTGGGCCGGG
AAAACTACACTTCCCGGCATGCCTCACCTCGGGTGCGCCTGCGTACCGGAGCAATCCCGCTGGC
GAGCGGGTTAGTTTAAAGAGCTGTTTTAAGTTCCATGGAAACAAACTTGCTGGCCGCAGGACGG
AGCTACGGACTGGTGGATGGATTAGGGGTGCATATGGAAACCACAGTGTGCAGACCAGTCCTGT
CTCCAACCCACATCAATGCGACAGCTTCAGAAACGTTCACAGTCCTTCAGCAGAAGATGAGAAT
AGTTGAGGAACAAACCAGCTCTCTGAGAGATGACCTAATAATGCTAGGATATGGTGACAGACGA
TGTCAATTACAAACTTCAGACTATTTAGAAGACCCTGTCAGCCAGAAAGTCACTAGTCCTATTC
CAAATGAAGTAGTTTGTCCAGAAAGCAGAGGTATTTTGTGGAAGAACTATGAATTCCTGGCAAA
TCGAATGTGCTATTTGGAGAACCTCATCCAGCCCTTGAAGATGAACATCTTTCACCTACAAACT
GAAAAGGACCTGAATCCACAGAAAGCAGCGTTTCTGAAGGATCAGCTGAACACAATACAGGGGG
AGCACTTCAAGGACCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAACTGAAAGT
TGTTAAGGAGGAAGAAGACAGGGCACAAGATGAAGTGCAGAGGTTGACTGCTACTCTGGAAATT
GCCACAGAGACAAAGAAGAACGCGGCTGTCATTGAGGAGGAGCTAAAGACCACAAAGCGTAAAA
TGAACCTTAAAATTCAAGAGCTCAGGCGACAACTGGCTCAGGAGGAGCATGTCAGGGCGTCTCT
TGAGAAGTCTGCATCATCCATGCTCCTCAAAGTACATGAGATGGAGTCAGCGGTGGAGGCCGAA
CGGCAGCAGGTGCACACTTTGCAGCAGAAGTGCATCGATCTACACAGCTCTATGCAAACAACCC
AAGAACTGCTGGCCCAGGAGCAGCAGAAGAGTAACGGCTTGGAGATGACGGCCTCGCAGCTCAA
GTCTGATCTAATTTCCAGAGATAACCTGATTTACAAGTTGGTTGAAGAAAATAAGAGTACACAA
ATGTCTCTCAAGAAGGAACATGAAGAAAATACTTATTTGAAATCTGAAGTACTGTCCCTTCAAG
ATATATCAGGAAAAGCACAGGTTTTGAATGACCAACTTTCCAAAAAGTGTTCAGAGCTTACCAG
CATGCTTAAGGCTGTTAAACTGGAAAATTCCAGAATTATTGCTGAACATCATGCTACTTTGAAG
GTAGAGCAGAAAATGATAACAGAGACATTTCAAGAGCAAAATTTACTGTTAGACACAGCCCATG
CCAGCATCACAGGCGAGCTCCAAACTGTGCAGAATGATAAAGCGCAACTCCAGATGCATCTAGA
CCATTTAATTCTTGAGCACAATCAGTGTCTCCAGAAAGCACAGGAGGCTGAGAAGAGGACAATG
GCACAAAAAGAACTTCTAGAATCAACTATTGCAAGACTACGAGGTGAACTGGAAGCATCAATGC
AGGAGAAGAAGTCTCTGCTGGAGAAGAATGAATGGTTTCAGAGGGAGCAGGTTAATAAATCAGA
AAAGGGAGTAGCCAAAGAAAAATGCAATTTGGAAAAAGAATTAGCTGAAAGCAAGGAAGACACT
AATGTGTTGAATCAAAACCTGCAGATTCTAGTTGAAGAAAATAAGCATCTGACAGATAAGATGG
CTTCCCTTGAACATCACAAAGCCACTTCTGATTACCAAGGGTTTGCTCAGCAGAAAGTGGAGAA
GGCCTTGGAAAAAATTACTGAGAGTAAAAATAAGCTTGCCTATGAAAAGGGGAAACTCCAGATA
AAAGTCAAACAGCTAGAAGAACAGCTGCACACTTTTACTGAAACCAGGCTGCACAACGACCACC
TACAAAGACAGAATAAGGCTTTAGAGGTCAAGCATGCTCAGATAAAATCTCTTCTTGGGAAAAA
TGAGGAAGAGCTGGCTGAAGCAGTGAAGTGTCGGGATGCTGCCCTGAAAGAAAGCCAGAAGTTG
AAAGGGGACCTGGAGGCATTGGAGGACAGGGAGAACAAGAAGGTGGGTAACTTTCAGAAACAAT
TAGCAGAGGCTAAAGAAGACAACTGCAAAGTCACAATCATGCTGGAAAATGTGCTGGCTTCCCA
CAGTAAGATGCAGGGTGCCCTGGAGAAAGTCCAGATAGAGCTCGGGAGGAGAGATTCAGAGATC
GCAGGCCTCAAGAAGGAAAGGTCTCTAAATCAGCAGCGAGTACAGAAGCTTGAAGCGGAGGTGG
ACCAGTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCACAGCAATGAGATGGAGCCACTACA
GAAGTCTCTAGATGTAACTAGAGAAGATAACAGGAAACTGGCCATGAGCCTAGAGCAGGCTCTC
CAGACAAATGGCCATCTGCAGTCTAAGCTTGATCACCTCCAAGAAAAACTGGAGAGCAAAGAGC
GTGAGCGGCAGAATCTGGAAGCCTTCAAAGAGCGGGTTGCTGAGGAATCCAAAGTAGAAGCAGA
ATTACATGCAGAACGCATTGAAGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGACTGCAAAG
AAAGTATCACATAGGGAAGTTTCTGAGCTGAAGAAAGCTCTTGACGAAGCCAACTTCAGATCTG
TAGAAGTGTCCCGGACAAACCGAGAGCTACGACACAAAGCTACAGAGCTAGAAAAAGTGGTGAA
CAGTAACAAGGAAAAGCTCAAGAACCAACGGGCCCAGATAAGGATGCACTTGTCAGCCAAAGCA
AACAGTGCACAGAACATGGAGAGGATGAAGCAAATAGAAATGGAATTGAGGCAAATGGAGATAA
TTAAGGATCAATATCAGAAAAAGAACTATGAACAGGACCTGGAAGACACCATCAGACACCTGAG
GAAATGTAAAGAAGCAACAGAGAATAAACTGAAAGAAGCCAGTGTGGAATCTGAACAGATAACA
GCTAATCTGGAAGAAGCTCACCGCTGGTTTAAATGCAGGTTCGATGGATTACAACTTGAGCTGA
CAAAAAACCGGTTGCAGAGGCTTCCCCGGGAAGACAGGTGGCTGGAAGAGAATCAAGACATGAG
GCATAATATTGCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAACAGAACCTTGGGCTT
ATGCCCAAGAAGTACCACTCTGACACAGAGAGGAAGAAGTGACCTGGACAGGAGTCTCCTCCAG
AGAAGCCATTCCTCTGTGATTCTGCGGGCCAGCAAGTGAGGCTGGCCTGTTCTACATTATAAGA
ACATGATGTATGCTGAAGATTTTGGATTTTATCCTTTATGGACTCTTTTACATTACTGCAGAAC
CAACCCATCTCTTTGTCCCTTTCCCTATTTTGTTCCAAATAAATTTAAACTAGTTTGTTTTATG
ATACTAGATGCTGTCCCATGATGTTTGCTATGTTCAGAAAGAATTTAGTGTTGAGTGAAATGGC
CACAATAATATGTTCTAGATGCATCCTATAAGATGTTCTCTGGAAATTAAATTATTTGTAAATA
CAGTAGACACCCTTCTATACCTTCTAAACACACACACACACACACACACGTACATGCACATGTG
CGCACACACACACACAAATTTCTGAGATGCCACATGTAGACTATACTTACAGCCACTTTGGTCA
CTAAAGGGTTGTTTACTGAATAAAGGAGTTGCACTATTCTAGGAACCTGACTGGTAAGTATGGT
TCCCTTTCACAGAAGGAAGGAGCAACTTGAACTTTGTTTATTTCAATATTAAATGGTGGGTTTT
ATAATCTACACTTAACATATATAATGGACTGGCAGAATATCTTGCTTCTTATGCTGGTCCTACC
AAGCCCTAATGTAAGTGTACAATTATGATAATGCAGAGAGTAATGACTACAACACAGCCCAGGG
TTGCAGTGGCAATTTCTGATGTGAAATGGTAAAACTCAATTTCTCACTATATTTGAAAGGAGGA
CTAACTACTCCTGAGCACATTGCTGGCCTTTTATTGAGGTCGAAGGGACAGGGAATTCAAGCAT
TAGAGGACTACCTGATTTTGGAGGCGTTCATGGGTTAATATATGTATTAGAATTATATGGGCGA
GACTGTTCATTGACATTCAAACCAACTCCTATTTTTCTGGCTTTCAGAAGTAGGTAACTCTCAC
TGCTTGGTGGACTTTTGAGAAAGTGTCCACTAAAGAAAGAAAGCTACAATGTGTTGCTTGAAGA
CTTCTGAGAAGTGTTTGTTATCAAGACCGCACAATAATCCATTCTTAGGAGGATGGTATTTTAT
TCTGTGTGCACCCTTTGTTCTTTGTTTCATATTAGAACAGTGACTATATTCACATTTAAGATTG
AACAGAAAATACTAAATAACTATCTTTCTGCTTAGGAGAGATTAACTTTTATGCTCATAACTAC
TTTTGTGTTATATTTCAAAGTCTCCTCCAAAATTTTATTTTGAAACTTAATACCATTATAGTAG
TTTTTAAGGATTGGAGTCTTCAAAGTTGTAGATTGTATCATAATAGCCTTTAATAATGGATTCA
TGTCTTTAAAGGGGGCTGGCGGCAACTGCCTTCAGCTCTGCTGACCCTTTGCCATTACCATGAG
ACGATAAGGCACCTAGCATCCCAGAAGACACCAGCAATAAGGTGCCCCTGGATGTGGAGAGCAG
AGTCCCATCACACACTAACCCTGTCAGCAACTCCATCTTGGATTTCCTGGCTTCCAGAACTGTG
AGAAATCATTTCTGCTCTTTATAAACTTTCTACCCAAAGTTATTTTGTTTCAAAAAGCAAACAC
AAACTGAGACATTTGGTTAAGGAATTTACTTGGACACTATTGTTATTGGATGCTATTATTCATA
GATGTCTTTCCTCAGAAAGATAATTGTGCATTAGGTGTGTGTATGTATATGTGTGAGTCTGTGC
TTGTGTATGTGTGTGTTTGACAAATATATATATATATATACAAATATATATGTAAAAGATGAAT
GAAATGAATGAAAGTATTAGAGCTTTTAGTCTTGACTCAGCCAGGAGTCCTATAGATAATTAAC
CTTGGTCCTGAGCCAACACTAAAGACCTGAATTCATATAAGAAGTTCACAATCACTACACATGG
GCTATGATCATCTTTGGTGGATAGACATCTGCTGCCCTAATTACCTATGACAATCACAAGTACA
TGCCAGAATATTCATGTCCTGATCTAGAACAAGAACAATTTTCTTCATTTAGGTATCATCATCA
AAAGGTATTGTTATTAACATGTTCATTTAGATTACCTATTTGAGTTTGGGAAAGCGAATTATAG
TTAGATTGGTGACCATTTCTAGTAAGACTGTAGTAGTAATTAGTAAGGGAGATGTGATAACTAA
ATTAAAACTAGACTACCAAA

hide sequence

RefSeq Acc Id:

XM_039083603 ⟹ XP_038939531

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,962 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,793,545 - 55,897,218 (+)	NCBI

RefSeq Acc Id:

XM_039083604 ⟹ XP_038939532

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,793,544 - 55,897,218 (+)	NCBI

RefSeq Acc Id:

XM_039083605 ⟹ XP_038939533

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,301,297 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,803,618 - 55,897,218 (+)	NCBI

RefSeq Acc Id:

XM_039083606 ⟹ XP_038939534

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,296,047 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,801,604 - 55,897,218 (+)	NCBI

RefSeq Acc Id:

XM_039083607 ⟹ XP_038939535

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,962 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,793,546 - 55,897,218 (+)	NCBI

RefSeq Acc Id:

XM_039083608 ⟹ XP_038939536

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,793,545 - 55,897,218 (+)	NCBI

RefSeq Acc Id:

XM_039083610 ⟹ XP_038939538

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,387,718 (+)	NCBI
mRatBN7.2	9	55,793,544 - 55,893,222 (+)	NCBI

RefSeq Acc Id:

XM_039083611 ⟹ XP_038939539

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,346,480 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,852,179 - 55,897,218 (+)	NCBI

RefSeq Acc Id:

XM_039083613 ⟹ XP_038939541

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,346,480 - 63,391,671 (+)	NCBI
mRatBN7.2	9	55,852,182 - 55,897,218 (+)	NCBI

RefSeq Acc Id:

XM_063267174 ⟹ XP_063123244

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,403,644 (+)	NCBI

RefSeq Acc Id:

XM_063267175 ⟹ XP_063123245

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,671 (+)	NCBI

RefSeq Acc Id:

XM_063267177 ⟹ XP_063123247

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,671 (+)	NCBI

RefSeq Acc Id:

XM_063267178 ⟹ XP_063123248

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,671 (+)	NCBI

RefSeq Acc Id:

XR_005488902

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,360 (+)	NCBI
mRatBN7.2	9	55,793,545 - 55,896,899 (+)	NCBI

RefSeq Acc Id:

XR_005488904

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,075 (+)	NCBI
mRatBN7.2	9	55,793,545 - 55,896,625 (+)	NCBI

RefSeq Acc Id:

XR_005488906

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,388,281 (+)	NCBI
mRatBN7.2	9	55,793,545 - 55,893,835 (+)	NCBI

RefSeq Acc Id:

XR_005488907

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,389,328 (+)	NCBI
mRatBN7.2	9	55,793,545 - 55,894,878 (+)	NCBI

RefSeq Acc Id:

XR_010054598

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,403,644 (+)	NCBI

RefSeq Acc Id:

XR_010054599

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,403,644 (+)	NCBI

RefSeq Acc Id:

XR_010054600

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,403,644 (+)	NCBI

RefSeq Acc Id:

XR_010054601

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,403,644 (+)	NCBI

RefSeq Acc Id:

XR_010054602

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,360 (+)	NCBI

RefSeq Acc Id:

XR_010054603

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,075 (+)	NCBI

RefSeq Acc Id:

XR_010054604

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,403,644 (+)	NCBI

RefSeq Acc Id:

XR_010054605

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,371,622 (+)	NCBI

RefSeq Acc Id:

XR_594387

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,075 (+)	NCBI
mRatBN7.2	9	55,793,545 - 55,896,625 (+)	NCBI
Rnor_6.0	9	60,883,966 - 60,986,740 (+)	NCBI

Sequence:

show sequence

TCAGGGAGCGCAGAGGGATTCCGGCCAGGGTCCCTCCCCAAGCGGAGGGCCCTGGTGGGCCGGG
AAAACTACACTTCCCGGCATGCCTCACCTCGGGTGCGCCTGCGTACCGGAGCAATCCCGCTGGC
GAGCGGGTTAGTTTAAAGAGCTGTTTTAAGTTCCATGGAAACAAACTTGCTGGCCGCAGGACGG
AGCTACGGACTGGTGGATGGATTAGGGGTGCATATGGAAACCACAGTGTGCAGACCAGTCCTGT
CTCCAACCCACATCAATGCGACAGCTTCAGAAACGTTCACAGTCCTTCAGCAGAAGATGAGAAT
AGTTGAGGAACAAACCAGCTCTCTGAGAGATGACCTAATAATGCTAGGATATGGTGACAGACGA
TGTCAATTACAAACTTCAGACTATTTAGAAGACCCTGTCAGCCAGAAAGTCACTAGTCCTATTC
CAAATGAAGTAGTTTGTCCAGAAAGCAGAGGTATTTTGTGGAAGAACTATGAATTCCTGGCAAA
TCGAATGTGCTATTTGGAGAACCTCATCCAGCCCTTGAAGATGAACATCTTTCACCTACAAACT
GAAAAGGACCTGAATCCACAGAAAGCAGCGTTTCTGAAGGATCAGCTGAACACAATACAGGGGG
AGCACTTCAAGGACCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAACTGAAAGT
TGTTAAGGAGGAAGAAGACAGGGCACAAGATGAAGTGCAGAGGTTGACTGCTACTCTGGAAATT
GCCACAGAGACAAAGAAGAACGCGGCTGTCATTGAGGAGGAGCTAAAGACCACAAAGCGTAAAA
TGAACCTTAAAATTCAAGAGCTCAGGCGACAACTGGCTCAGGAGGAGCATGTCAGGGCGTCTCT
TGAGAAGTCTGCATCATCCATGCTCCTCAAAGTACATGAGATGGAGTCAGCGGTGGAGGCCGAA
CGGCAGCAGGTGCACACTTTGCAGCAGAAGTGCATCGATCTACACAGCTCTATGCAAACAACCC
AAGAACTGCTGGCCCAGGAGCAGCAGAAGAGTAACGGCTTGGAGATGACGGCCTCGCAGCTCAA
GTCTGATCTAATTTCCAGAGATAACCTGATTTACAAGTTGGTTGAAGAAAATAAGAGTACACAA
ATGTCTCTCAAGAAGGAACATGAAGAAAATACTTATTTGAAATCTGAAGTACTGTCCCTTCAAG
ATATATCAGGAAAAGCACAGGTTTTGAATGACCAACTTTCCAAAAAGTGTTCAGAGCTTACCAG
CATGCTTAAGGCTGTTAAACTGGAAAATTCCAGAATTATTGCTGAACATCATGCTACTTTGAAG
GTAGAGCAGAAAATGATAACAGAGACATTTCAAGAGCAAAATTTACTGTTAGACACAGCCCATG
CCAGCATCACAGGCGAGCTCCAAACTGTGCAGAATGATAAAGCGCAACTCCAGATGCATCTAGA
CCATTTAATTCTTGAGCACAATCAGTGTCTCCAGAAAGCACAGGAGGCTGAGAAGAGGACAATG
GCACAAAAAGAACTTCTAGAATCAACTATTGCAAGACTACGAGGTGAACTGGAAGCATCAATGC
AGGAGAAGAAGTCTCTGCTGGAGAAGAATGAATGGTTTCAGAGGGAGCAGGTTAATAAATCAGA
AAAGGGAGTAGCCAAAGAAAAATGCAATTTGGAAAAAGAATTAGCTGAAAGCAAGGAAGACACT
AATGTGTTGAATCAAAACCTGCAGATTCTAGTTGAAGAAAATAAGCATCTGACAGATAAGATGG
CTTCCCTTGAACATCACAAAGCCACTTCTGATTACCAAGGGTTTGCTCAGCAGAAAGTGGAGAA
GGCCTTGGAAAAAATTACTGAGAGTAAAAATAAGCTTGCCTATGAAAAGGGGAAACTCCAGATA
AAAGTCAAACAGCTAGAAGAACAGCTGCACACTTTTACTGAAACCAGGCTGCACAACGACCACC
TACAAAGACAGAATAAGGCTTTAGAGGTCAAGCATGCTCAGATAAAATCTCTTCTTGGGAAAAA
TGAGGAAGAGCTGGCTGAAGCAGTGAAGTGTCGGGATGCTGCCCTGAAAGAAAGCCAGAAGTTG
AAAGGGGACCTGGAGGCATTGGAGGACAGGGAGAACAAGAAGGTGGGTAACTTTCAGAAACAAT
TAGCAGAGGCTAAAGAAGACAACTGCAAAGTCACAATCATGCTGGAAAATGTGCTGGCTTCCCA
CAGTAAGATGCAGGGTGCCCTGGAGAAAGTCCAGATAGAGCTCGGGAGGAGAGATTCAGAGATC
GCAGGCCTCAAGAAGGAAAGGTCTCTAAATCAGCAGCGAGTACAGAAGCTTGAAGCGGAGGTGG
ACCAGTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCACAGCAATGAGATGGAGCCACTACA
GAAGTCTCTAGATGTAACTAGAGAAGATAACAGGAAACTGGCCATGAGCCTAGAGCAGGCTCTC
CAGACAAATGGCCATCTGCAGTCTAAGCTTGATCACCTCCAAGAAAAACTGGAGAGCAAAGAGC
GTGAGCGGCAGAATCTGGAAGCCTTCAAAGAGCGGGTTGCTGAGGAATCCAAAGTAGAAGCAGA
ATTACATGCAGAACGCATTGAAGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGACTGCAAAG
AAAGTATCACATAGGGAAGTTTCTGAGCTGAAGAAAGCTCTTGACGAAGCCAACTTCAGATCTG
TAGAAGTGTCCCGGACAAACCGAGAGCTACGACACAAAGCTACAGAGCTAGAAAAAGTGGTGAA
CAGTAACAAGGAAAAGCTCAAGAACCAACGGGCCCAGATAAGGATGCACTTGTCAGCCAAAGCA
AACAGTGCACAGAACATGGAGAGGATGAAGCAAATAGAAATGGAATTGAGGCAAATGGAGATAA
TTAAGGATCAATATCAGAAAAAGAACTATGAACAGTCATTGAGTATCCAGAGATTTGTATCTGA
AATGAATGCTCTGCAGAAGGAGATGGAGATGTTAGCTAAGAGCCAGTATGAGACCTCAGCGAGA
AATAAACAGCAAGAGTTGAGACTAGTGGCTGAGCGAAAAATAAGGCAGGAGCTAGAAAGCCGAT
GCAAGGACCTGGAAGACACCATCAGACACCTGAGGAAATGTAAAGAAGCAACAGAGAATAAACT
GAAAGAAGCCAGTGTGGAATCTGAACAGACAGGGTCTCTTATTGGACTGGAACTCACCAACTAG
ACTAGGCCGGCTATCCAGCAAGTCCCAGGGATCTGCTTGTCTCCTCCTCCCTGGCTCTTGGATT
ACAAATAACAGCTAATCTGGAAGAAGCTCACCGCTGGTTTAAATGCAGGTTCGATGGATTACAA
CTTGAGCTGACAAAAAACCGGTTGC

hide sequence

RefSeq Acc Id:

XR_594389

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	9	63,287,989 - 63,391,387 (+)	NCBI
mRatBN7.2	9	55,793,545 - 55,897,218 (+)	NCBI
Rnor_6.0	9	60,883,966 - 60,987,123 (+)	NCBI

Sequence:

show sequence

TCAGGGAGCGCAGAGGGATTCCGGCCAGGGTCCCTCCCCAAGCGGAGGGCCCTGGTGGGCCGGG
AAAACTACACTTCCCGGCATGCCTCACCTCGGGTGCGCCTGCGTACCGGAGCAATCCCGCTGGC
GAGCGGGTTAGTTTAAAGAGCTGTTTTAAGTTCCATGGAAACAAACTTGCTGGCCGCAGGACGG
AGCTACGGACTGGTGGATGGATTAGGGGTGCATATGGAAACCACAGTGTGCAGACCAGTCCTGT
CTCCAACCCACATCAATGCGACAGCTTCAGAAACGTTCACAGTCCTTCAGCAGAAGATGAGAAT
AGTTGAGGAACAAACCAGCTCTCTGAGAGATGACCTAATAATGCTAGGATATGGTGACAGACGA
TGTCAATTACAAACTTCAGACTATTTAGAAGACCCTGTCAGCCAGAAAGTCACTAGTCCTATTC
CAAATGAAGTAGTTTGTCCAGAAAGCAGAGGTATTTTGTGGAAGAACTATGAATTCCTGGCAAA
TCGAATGTGCTATTTGGAGAACCTCATCCAGCCCTTGAAGATGAACATCTTTCACCTACAAACT
GAAAAGGACCTGAATCCACAGAAAGCAGCGTTTCTGAAGGATCAGCTGAACACAATACAGGGGG
AGCACTTCAAGGACCTGAAGCTGTTGCAACTTGAAGTGATGAATTTGCGCCAGCAACTGAAAGT
TGTTAAGGAGGAAGAAGACAGGGCACAAGATGAAGTGCAGAGGTTGACTGCTACTCTGGAAATT
GCCACAGAGACAAAGAAGAACGCGGCTGTCATTGAGGAGGAGCTAAAGACCACAAAGCGTAAAA
TGAACCTTAAAATTCAAGAGCTCAGGCGACAACTGGCTCAGGAGGAGCATGTCAGGGCGTCTCT
TGAGAAGTCTGCATCATCCATGCTCCTCAAAGTACATGAGATGGAGTCAGCGGTGGAGGCCGAA
CGGCAGCAGGTGCACACTTTGCAGCAGAAGTGCATCGATCTACACAGCTCTATGCAAACAACCC
AAGAACTGCTGGCCCAGGAGCAGCAGAAGAGTAACGGCTTGGAGATGACGGCCTCGCAGCTCAA
GTCTGATCTAATTTCCAGAGATAACCTGATTTACAAGTTGGTTGAAGAAAATAAGAGTACACAA
ATGTCTCTCAAGAAGGAACATGAAGAAAATACTTATTTGAAATCTGAAGTACTGTCCCTTCAAG
ATATATCAGGAAAAGCACAGGTTTTGAATGACCAACTTTCCAAAAAGTGTTCAGAGCTTACCAG
CATGCTTAAGGCTGTTAAACTGGAAAATTCCAGAATTATTGCTGAACATCATGCTACTTTGAAG
GTAGAGCAGAAAATGATAACAGAGACATTTCAAGAGCAAAATTTACTGTTAGACACAGCCCATG
CCAGCATCACAGGCGAGCTCCAAACTGTGCAGAATGATAAAGCGCAACTCCAGATGCATCTAGA
CCATTTAATTCTTGAGCACAATCAGTGTCTCCAGAAAGCACAGGAGGCTGAGAAGAGGACAATG
GCACAAAAAGAACTTCTAGAATCAACTATTGCAAGACTACGAGGTGAACTGGAAGCATCAATGC
AGGAGAAGAAGTCTCTGCTGGAGAAGAATGAATGGTTTCAGAGGGAGCAGGTTAATAAATCAGA
AAAGGGAGTAGCCAAAGAAAAATGCAATTTGGAAAAAGAATTAGCTGAAAGCAAGGAAGACACT
AATGTGTTGAATCAAAACCTGCAGATTCTAGTTGAAGAAAATAAGCATCTGACAGATAAGATGG
CTTCCCTTGAACATCACAAAGCCACTTCTGATTACCAAGGGTTTGCTCAGCAGAAAGTGGAGAA
GGCCTTGGAAAAAATTACTGAGAGTAAAAATAAGCTTGCCTATGAAAAGGGGAAACTCCAGATA
AAAGTCAAACAGCTAGAAGAACAGCTGCACACTTTTACTGAAACCAGGCTGCACAACGACCACC
TACAAAGACAGAATAAGGCTTTAGAGGTCAAGCATGCTCAGATAAAATCTCTTCTTGGGAAAAA
TGAGGAAGAGCTGGCTGAAGCAGTGAAGTGTCGGGATGCTGCCCTGAAAGAAAGCCAGAAGTTG
AAAGGGGACCTGGAGGCATTGGAGGACAGGGAGAACAAGAAGGTGGGTAACTTTCAGAAACAAT
TAGCAGAGGCTAAAGAAGACAACTGCAAAGTCACAATCATGCTGGAAAATGTGCTGGCTTCCCA
CAGTAAGATGCAGGGTGCCCTGGAGAAAGTCCAGATAGAGCTCGGGAGGAGAGATTCAGAGATC
GCAGGCCTCAAGAAGGAAAGGTCTCTAAATCAGCAGCGAGTACAGAAGCTTGAAGCGGAGGTGG
ACCAGTGGCAGGCCAGGATGCTGATTGTGGAGGCCCAGCACAGCAATGAGATGGAGCCACTACA
GAAGTCTCTAGATGTAACTAGAGAAGATAACAGGAAACTGGCCATGAGCCTAGAGCAGGCTCTC
CAGACAAATGGCCATCTGCAGTCTAAGCTTGATCACCTCCAAGAAAAACTGGAGAGCAAAGAGC
GTGAGCGGCAGAATCTGGAAGCCTTCAAAGAGCGGGTTGCTGAGGAATCCAAAGTAGAAGCAGA
ATTACATGCAGAACGCATTGAAGCTCTGAGGAAGCAGTTTCAAACCGAGAGAGAGACTGCAAAG
AAAGTATCACATAGGGAAGTTTCTGAGCTGAAGAAAGCTCTTGACGAAGCCAACTTCAGATCTG
TAGAAGTGTCCCGGACAAACCGAGAGCTACGACACAAAGCTACAGAGCTAGAAAAAGTGGTGAA
CAGTAACAAGGAAAAGCTCAAGAACCAACGGGCCCAGATAAGGATGCACTTGTCAGCCAAAGCA
AACAGTGCACAGAACATGGAGAGGATGAAGCAAATAGAAATGGAATTGAGGCAAATGGAGATAA
TTAAGGATCAATATCAGAAAAAGAACTATGAACAGTCATTGAGTATCCAGAGATTTGTATCTGA
AATGAATGCTCTGCAGAAGGAGATGGAGATGTTAGCTAAGAGCCAGTATGAGACCTCAGCGAGA
AATAAACAGCAAGAGTTGAGACTAGTGGCTGAGCGAAAAATAAGGCAGGAGCTAGAAAGCCGAT
GCAAGGACCTGGAAGACACCATCAGACACCTGAGGAAATGTAAAGAAGCAACAGAGAATAAACT
GAAAGAAGCCAGTGTGGAATCTGAACAGGTTCGATGGATTACAACTTGAGCTGACAAAAAACCG
GTTGCAGAGGCTTCCCCGGGAAGACAGGTGGCTGGAAGAGAATCAAGACATGAGGCATAATATT
GCAACCAGCCAATCTGTTCTACATCGATGGGAAACTAAACAGAACCTTGGGCTTATGCCCAAGA
AGTA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001399692	(Get FASTA)	NCBI Sequence Viewer
	NP_001415771	(Get FASTA)	NCBI Sequence Viewer
	NP_001415776	(Get FASTA)	NCBI Sequence Viewer
	NP_001415777	(Get FASTA)	NCBI Sequence Viewer
	NP_001415778	(Get FASTA)	NCBI Sequence Viewer
	NP_001415779	(Get FASTA)	NCBI Sequence Viewer
	XP_008765317	(Get FASTA)	NCBI Sequence Viewer
	XP_008765318	(Get FASTA)	NCBI Sequence Viewer
	XP_038939531	(Get FASTA)	NCBI Sequence Viewer
	XP_038939532	(Get FASTA)	NCBI Sequence Viewer
	XP_038939533	(Get FASTA)	NCBI Sequence Viewer
	XP_038939534	(Get FASTA)	NCBI Sequence Viewer
	XP_038939535	(Get FASTA)	NCBI Sequence Viewer
	XP_038939536	(Get FASTA)	NCBI Sequence Viewer
	XP_038939538	(Get FASTA)	NCBI Sequence Viewer
	XP_038939539	(Get FASTA)	NCBI Sequence Viewer
	XP_038939541	(Get FASTA)	NCBI Sequence Viewer
	XP_063123244	(Get FASTA)	NCBI Sequence Viewer
	XP_063123245	(Get FASTA)	NCBI Sequence Viewer
	XP_063123247	(Get FASTA)	NCBI Sequence Viewer
	XP_063123248	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000017859
	ENSRNOP00000017859.7
	ENSRNOP00000072587
	ENSRNOP00000072587.2
	ENSRNOP00000078352
	ENSRNOP00000078352.1
	ENSRNOP00000109542
	ENSRNOP00000109542.1

RefSeq Acc Id:

XP_008765317 ⟸ XM_008767095

- Peptide Label:

isoform X3

- Sequence:

show sequence

METNLLAAGRSYGLVDGLGVHMETTVCRPVLSPTHINATASETFTVLQQKMRIVEEQTSSLRDD
LIMLGYGDRRCQLQTSDYLEDPVSQKVTSPIPNEVVCPESRGILWKNYEFLANRMCYLENLIQP
LKMNIFHLQTEKDLNPQKAAFLKDQLNTIQGEHFKDLKLLQLEVMNLRQQLKVVKEEEDRAQDE
VQRLTATLEIATETKKNAAVIEEELKTTKRKMNLKIQELRRQLAQEEHVRASLEKSASSMLLKV
HEMESAVEAERQQVHTLQQKCIDLHSSMQTTQELLAQEQQKSNGLEMTASQLKSDLISRDNLIY
KLVEENKSTQMSLKKEHEENTYLKSEVLSLQDISGKAQVLNDQLSKKCSELTSMLKAVKLENSR
IIAEHHATLKVEQKMITETFQEQNLLLDTAHASITGELQTVQNDKAQLQMHLDHLILEHNQCLQ
KAQEAEKRTMAQKELLESTIARLRGELEASMQEKKSLLEKNEWFQREQVNKSEKGVAKEKCNLE
KELAESKEDTNVLNQNLQILVEENKHLTDKMASLEHHKATSDYQGFAQQKVEKALEKITESKNK
LAYEKGKLQIKVKQLEEQLHTFTETRLHNDHLQRQNKALEVKHAQIKSLLGKNEEELAEAVKCR
DAALKESQKLKGDLEALEDRENKKVGNFQKQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQ
IELGRRDSEIAGLKKERSLNQQRVQKLEAEVDQWQARMLIVEAQHSNEMEPLQKSLDVTREDNR
KLAMSLEQALQTNGHLQSKLDHLQEKLESKERERQNLEAFKERVAEESKVEAELHAERIEALRK
QFQTERETAKKVSHREVSELKKALDEANFRSVEVSRTNRELRHKATELEKVVNSNKEKLKNQRA
QIRMHLSAKANSAQNMERMKQIEMELRQMEIIKDQYQKKNYEQSLSIQRFVSEMNALQKEMEML
AKSQYETSARNKQQELRLVAERKIRQELESRCKDLEDTIRHLRKCKEATENKLKEASVESEQIT
ANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWLEENQDMRHNIATSQSVLHRWETKQNLGL
MPKKYHSDTERKK

hide sequence

RefSeq Acc Id:

XP_008765318 ⟸ XM_008767096

- Peptide Label:

isoform X10

- Sequence:

show sequence

METNLLAAGRSYGLVDGLGVHMETTVCRPVLSPTHINATASETFTVLQQKMRIVEEQTSSLRDD
LIMLGYGDRRCQLQTSDYLEDPVSQKVTSPIPNEVVCPESRGILWKNYEFLANRMCYLENLIQP
LKMNIFHLQTEKDLNPQKAAFLKDQLNTIQGEHFKDLKLLQLEVMNLRQQLKVVKEEEDRAQDE
VQRLTATLEIATETKKNAAVIEEELKTTKRKMNLKIQELRRQLAQEEHVRASLEKSASSMLLKV
HEMESAVEAERQQVHTLQQKCIDLHSSMQTTQELLAQEQQKSNGLEMTASQLKSDLISRDNLIY
KLVEENKSTQMSLKKEHEENTYLKSEVLSLQDISGKAQVLNDQLSKKCSELTSMLKAVKLENSR
IIAEHHATLKVEQKMITETFQEQNLLLDTAHASITGELQTVQNDKAQLQMHLDHLILEHNQCLQ
KAQEAEKRTMAQKELLESTIARLRGELEASMQEKKSLLEKNEWFQREQVNKSEKGVAKEKCNLE
KELAESKEDTNVLNQNLQILVEENKHLTDKMASLEHHKATSDYQGFAQQKVEKALEKITESKNK
LAYEKGKLQIKVKQLEEQLHTFTETRLHNDHLQRQNKALEVKHAQIKSLLGKNEEELAEAVKCR
DAALKESQKLKGDLEALEDRENKKVGNFQKQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQ
IELGRRDSEIAGLKKERSLNQQRVQKLEAEVDQWQARMLIVEAQHSNEMEPLQKSLDVTREDNR
KLAMSLEQALQTNGHLQSKLDHLQEKLESKERERQNLEAFKERVAEESKVEAELHAERIEALRK
QFQTERETAKKVSHREVSELKKALDEANFRSVEVSRTNRELRHKATELEKVVNSNKEKLKNQRA
QIRMHLSAKANSAQNMERMKQIEMELRQMEIIKDQYQKKNYEQDLEDTIRHLRKCKEATENKLK
EASVESEQITANLEEAHRWFKCRFDGLQLELTKNRLQRLPREDRWLEENQDMRHNIATSQSVLH
RWETKQNLGLMPKKYHSDTERKK

hide sequence

Ensembl Acc Id:

ENSRNOP00000072587 ⟸ ENSRNOT00000081002

Ensembl Acc Id:

ENSRNOP00000017859 ⟸ ENSRNOT00000017859

RefSeq Acc Id:	XP_038939532 ⟸ XM_039083604
- Peptide Label:	isoform X2
- UniProtKB:	F1M7H6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939538 ⟸ XM_039083610
- Peptide Label:	isoform X13

RefSeq Acc Id:	XP_038939531 ⟸ XM_039083603
- Peptide Label:	isoform X1
- UniProtKB:	F1M7H6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939536 ⟸ XM_039083608
- Peptide Label:	isoform X9
- UniProtKB:	F1M7H6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939535 ⟸ XM_039083607
- Peptide Label:	isoform X7
- UniProtKB:	F1M7H6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939534 ⟸ XM_039083606
- Peptide Label:	isoform X5
- UniProtKB:	F1M7H6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939533 ⟸ XM_039083605
- Peptide Label:	isoform X4
- UniProtKB:	F1M7H6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038939539 ⟸ XM_039083611
- Peptide Label:	isoform X14

RefSeq Acc Id:	XP_038939541 ⟸ XM_039083613
- Peptide Label:	isoform X15
- UniProtKB:	A0A8I5ZKR5 (UniProtKB/TrEMBL), A6INZ6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000078352 ⟸ ENSRNOT00000113546

RefSeq Acc Id:	NP_001399692 ⟸ NM_001412763
- UniProtKB:	F1M7H6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063123244 ⟸ XM_063267174
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_063123247 ⟸ XM_063267177
- Peptide Label:	isoform X11

RefSeq Acc Id:	XP_063123245 ⟸ XM_063267175
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_063123248 ⟸ XM_063267178
- Peptide Label:	isoform X12

Ensembl Acc Id:

ENSRNOP00000109542 ⟸ ENSRNOT00000148114

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-F1M7H6-F1-model_v2	AlphaFold	F1M7H6	1-1102	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13696665

Promoter ID:

EPDNEW_R7189

Type:

multiple initiation site

Name:

Ccdc150_1

Description:

coiled-coil domain containing 150

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	9	60,883,982 - 60,884,042	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304775	AgrOrtholog
BioCyc Gene	G2FUF-27548	BioCyc
Ensembl Genes	ENSRNOG00000013318	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000017859	ENTREZGENE
	ENSRNOT00000017859.7	UniProtKB/TrEMBL
	ENSRNOT00000081002	ENTREZGENE
	ENSRNOT00000081002.3	UniProtKB/TrEMBL
	ENSRNOT00000113546	ENTREZGENE
	ENSRNOT00000113546.2	UniProtKB/TrEMBL
	ENSRNOT00000148114	ENTREZGENE
	ENSRNOT00000148114.1	UniProtKB/TrEMBL
InterPro	CCDC150	UniProtKB/TrEMBL
NCBI Gene	316399	ENTREZGENE
PANTHER	COILED-COIL DOMAIN-CONTAINING PROTEIN 150	UniProtKB/TrEMBL
	PTHR35352	UniProtKB/TrEMBL
PhenoGen	Ccdc150	PhenoGen
RatGTEx	ENSRNOG00000013318	RatGTEx
UniProt	A0A0G2K3C9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZKR5	ENTREZGENE, UniProtKB/TrEMBL
	A0ABK0LFR1_RAT	UniProtKB/TrEMBL
	A6INZ6	ENTREZGENE, UniProtKB/TrEMBL
	F1M7H6	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2008-04-25	Ccdc150	coiled-coil domain containing 150	RGD1304775_predicted	similar to hypothetical protein DKFZp434P055 (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-20	RGD1304775_predicted	similar to hypothetical protein DKFZp434P055 (predicted)	LOC316399_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC316399_predicted	similar to hypothetical protein DKFZp434P055 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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