Mov10l1 (Mov10 like RNA helicase 1) - Rat Genome Database

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Gene: Mov10l1 (Mov10 like RNA helicase 1) Rattus norvegicus
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Symbol: Mov10l1
Name: Mov10 like RNA helicase 1
RGD ID: 1304735
Description: Predicted to enable RNA helicase activity and piRNA binding activity. Predicted to be involved in several processes, including male meiosis I; regulatory ncRNA-mediated gene silencing; and spermatogenesis. Predicted to be located in pi-body. Predicted to be active in P granule and cytosol. Human ortholog(s) of this gene implicated in spermatogenic failure 73. Orthologous to human MOV10L1 (Mov10 like RNA helicase 1); INTERACTS WITH indole-3-methanol; methoxychlor; N-acetyl-L-cysteine.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC300141; Moloney leukemia virus 10-like 1; Mov10 like RISC complex RNA helicase 1; Mov10 RISC complex RNA helicase like 1; Mov10l1, Moloney leukemia virus 10-like 1, homolog; Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse); RNA helicase Mov10l1
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87121,949,743 - 122,015,042 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7121,949,822 - 122,015,042 (+)EnsemblGRCr8
mRatBN7.27120,070,171 - 120,135,406 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7120,070,135 - 120,134,765 (+)EnsemblmRatBN7.2
Rnor_6.07129,973,391 - 130,039,306 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7129,973,480 - 130,037,344 (+)Ensemblrn6Rnor6.0
Rnor_5.07129,659,387 - 129,724,099 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47127,293,690 - 127,357,694 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7116,543,232 - 116,610,213 (+)NCBICelera
RGSC_v3.17127,325,513 - 127,391,351 (+)NCBI
Cytogenetic Map7q34NCBI
JBrowse:




Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (IBA)
P granule  (IBA,ISO)
pi-body  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:11279525   PMID:11854500   PMID:20534472   PMID:20547853   PMID:23166510   PMID:25762440  


Genomics

Comparative Map Data
Mov10l1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87121,949,743 - 122,015,042 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl7121,949,822 - 122,015,042 (+)EnsemblGRCr8
mRatBN7.27120,070,171 - 120,135,406 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7120,070,135 - 120,134,765 (+)EnsemblmRatBN7.2
Rnor_6.07129,973,391 - 130,039,306 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7129,973,480 - 130,037,344 (+)Ensemblrn6Rnor6.0
Rnor_5.07129,659,387 - 129,724,099 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.47127,293,690 - 127,357,694 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera7116,543,232 - 116,610,213 (+)NCBICelera
RGSC_v3.17127,325,513 - 127,391,351 (+)NCBI
Cytogenetic Map7q34NCBI
MOV10L1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382250,090,006 - 50,161,687 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2250,090,006 - 50,161,690 (+)Ensemblhg38GRCh38
GRCh372250,528,435 - 50,600,116 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362248,870,621 - 48,942,243 (+)NCBIBuild 36Build 36hg18NCBI36
Build 342248,830,950 - 48,902,572NCBI
Celera2234,403,662 - 34,475,028 (+)NCBICelera
Cytogenetic Map22q13.33NCBI
HuRef2233,426,626 - 33,497,902 (+)NCBIHuRef
CHM1_12250,487,160 - 50,558,708 (+)NCBICHM1_1
T2T-CHM13v2.02250,596,905 - 50,668,447 (+)NCBIT2T-CHM13v2.0
Mov10l1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391588,867,094 - 88,939,355 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1588,867,112 - 88,939,355 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381588,982,891 - 89,055,152 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1588,982,909 - 89,055,152 (+)Ensemblmm10GRCm38
MGSCv371588,813,424 - 88,885,582 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361588,813,324 - 88,882,914 (+)NCBIMGSCv36mm8
Celera1591,109,412 - 91,182,451 (+)NCBICelera
Cytogenetic Map15E3NCBI
cM Map1544.49NCBI
Mov10l1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541333,142,918 - 33,208,329 (+)Ensembl
ChiLan1.0NW_00495541333,142,857 - 33,208,897 (+)NCBIChiLan1.0ChiLan1.0
MOV10L1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22359,996,978 - 60,067,961 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12262,683,448 - 62,761,624 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02230,320,202 - 30,391,121 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12249,319,203 - 49,389,765 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2249,319,203 - 49,389,765 (+)EnsemblpanPan2panpan1.1
MOV10L1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11017,067,273 - 17,139,910 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1017,067,273 - 17,240,197 (-)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1017,044,831 - 17,117,420 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01017,793,917 - 17,866,527 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1017,793,922 - 17,865,739 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11017,517,937 - 17,590,515 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01017,840,962 - 17,913,508 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01017,973,234 - 18,045,829 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Mov10l1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945632,833 - 693,671 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936629633,418 - 693,598 (-)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936629631,368 - 693,598 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MOV10L1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.15509,868 - 567,429 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.25110,732,807 - 110,790,452 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MOV10L1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11932,586,652 - 32,653,563 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1932,587,008 - 32,653,886 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_02366604592,700,960 - 92,770,793 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mov10l1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624752580,155 - 651,000 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_004624752580,580 - 651,209 (-)NCBIHetGla 1.0HetGla 1.0hetGla2
Mov10l1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v11258,297,723 - 258,363,122 (+)NCBIRrattus_CSIRO_v1

Variants

.
Variants in Mov10l1
468 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:164
Count of miRNA genes:94
Interacting mature miRNAs:98
Transcripts:ENSRNOT00000042686, ENSRNOT00000050620
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7121393075137014596Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7119280025135560836Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)782111245123048330Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7104186212135371468Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)793302009131686183Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)795485047137014596Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7115313999136544683Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)746307490127866166Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)785043242130043242Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)785497398130497398Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)792362341137014596Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)783626689128626689Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)782111382132099989Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)798549867137014596Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)782111245123048330Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)740540077123682549Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7110725024135371468Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)7100548246137014596Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)782111245134948181Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)777807807122807807Rat
1582240Sffal1Serum free fatty acids level QTL 13.40.0021blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)7118556868125929417Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)7116269196132020414Rat
10402855Bp379Blood pressure QTL 3790.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)778682549123682549Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)771827901136544683Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
2 3 33 100 29 37 11 15 11 6 101 61 8 86 24 74 26 6 6

Sequence


Ensembl Acc Id: ENSRNOT00000042686   ⟹   ENSRNOP00000039486
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8 Ensembl7121,949,822 - 122,015,042 (+)Ensembl
mRatBN7.2 Ensembl7120,070,135 - 120,134,765 (+)Ensembl
Rnor_6.0 Ensembl7129,973,480 - 130,037,344 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000050620   ⟹   ENSRNOP00000044343
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl7129,973,480 - 130,037,338 (+)Ensembl
RefSeq Acc Id: NM_001427488   ⟹   NP_001414417
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87121,949,822 - 122,015,042 (+)NCBI
RefSeq Acc Id: XM_006242249   ⟹   XP_006242311
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87121,949,743 - 122,014,408 (+)NCBI
mRatBN7.27120,070,171 - 120,135,401 (+)NCBI
Rnor_6.07129,973,391 - 130,039,306 (+)NCBI
Rnor_5.07129,659,387 - 129,724,099 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017595285   ⟹   XP_017450774
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87121,949,743 - 122,014,408 (+)NCBI
mRatBN7.27120,070,171 - 120,135,401 (+)NCBI
Rnor_6.07129,973,391 - 130,039,306 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017595286   ⟹   XP_017450775
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87121,949,743 - 122,014,408 (+)NCBI
mRatBN7.27120,070,171 - 120,135,403 (+)NCBI
Rnor_6.07129,973,391 - 130,039,306 (+)NCBI
Sequence:
RefSeq Acc Id: XP_006242311   ⟸   XM_006242249
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017450775   ⟸   XM_017595286
- Peptide Label: isoform X2
- UniProtKB: D3ZH42 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017450774   ⟸   XM_017595285
- Peptide Label: isoform X1
- UniProtKB: D3ZH42 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000044343   ⟸   ENSRNOT00000050620
Ensembl Acc Id: ENSRNOP00000039486   ⟸   ENSRNOT00000042686
RefSeq Acc Id: NP_001414417   ⟸   NM_001427488

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3ZH42-F1-model_v2 AlphaFold D3ZH42 1-1239 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13695586
Promoter ID:EPDNEW_R6100
Type:single initiation site
Name:Mov10l1_1
Description:Mov10 RISC complex RNA helicase like 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.07129,973,439 - 129,973,499EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1304735 AgrOrtholog
BioCyc Gene G2FUF-32471 BioCyc
Ensembl Genes ENSRNOG00000031093 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000042686 ENTREZGENE
  ENSRNOT00000042686.7 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
  3.90.930.1 UniProtKB/TrEMBL
InterPro DNA2/NAM7_AAA_11 UniProtKB/TrEMBL
  DNA2/NAM7_like_AAA_12 UniProtKB/TrEMBL
  MOV-10-like_beta-barrel UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  SF1_C_Upf1 UniProtKB/TrEMBL
NCBI Gene 300141 ENTREZGENE
PANTHER CANCER/TESTIS ANTIGEN 55 UniProtKB/TrEMBL
  CANCER/TESTIS ANTIGEN 55 UniProtKB/TrEMBL
Pfam AAA_11 UniProtKB/TrEMBL
  AAA_12 UniProtKB/TrEMBL
  MOV-10_beta-barrel UniProtKB/TrEMBL
PhenoGen Mov10l1 PhenoGen
RatGTEx ENSRNOG00000031093 RatGTEx
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt D3ZH42 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-09-14 Mov10l1  Mov10 like RNA helicase 1  Mov10l1  Mov10 like RISC complex RNA helicase 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2018-07-20 Mov10l1  Mov10 like RISC complex RNA helicase 1  Mov10l1  Mov10 RISC complex RNA helicase like 1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-07-10 Mov10l1  Mov10 RISC complex RNA helicase like 1  Mov10l1  Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-25 Mov10l1  Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)  Mov10l1  Moloney leukemia virus 10-like 1   Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Mov10l1  Moloney leukemia virus 10-like 1   Mov10l1_predicted  Moloney leukemia virus 10-like 1 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Mov10l1_predicted  Moloney leukemia virus 10-like 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED