Dstnl1 (destrin-like 1) - Rat Genome Database

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Gene: Dstnl1 (destrin-like 1) Rattus norvegicus
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Symbol: Dstnl1
Name: destrin-like 1
RGD ID: 1304558
Description: INTERACTS WITH trichloroethene
Type: pseudo
RefSeq Status: INFERRED
Previously known as: destrin; destrin-like; Dstn; LOC296197; similar to destrin
Related Functional Gene: Dstn  
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr820709,353 - 711,012 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.220704,086 - 705,745 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.020844,893 - 846,592 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_5.020829,250 - 830,953 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.420661,424 - 661,921 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera201,478,062 - 1,479,644 (+)NCBICelera
RGSC_v3.13132,264,090 - 132,289,883 (+)NCBI
Cytogenetic Map20p12NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:23106098   PMID:24625528  


Genomics

Variants

.
Variants in Dstnl1
23 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61474Eae1Experimental allergic encephalomyelitis QTL 13nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)2016693431Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20126925056Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20133724594Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20126128279Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20136600300Rat
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124164241Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20134066551Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20129193376Rat
70154Insul2Insulin level QTL 23.75blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)2016693431Rat
4889857Pur27Proteinuria QTL 2712.20.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20127341128Rat
724519Bp144Blood pressure QTL 1440.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)2013629303Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20129193376Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20129193376Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20129193376Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20129193376Rat
61432Cia1Collagen induced arthritis QTL 1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)20114100378Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20127341128Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20132578510Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20136600300Rat

Markers in Region
RH130919  
Rat AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map20p12UniSTS
Cytogenetic Map3q41UniSTS
AU042046  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.220705,464 - 705,629 (+)MAPPERmRatBN7.2
mRatBN7.23131,311,080 - 131,311,245 (+)MAPPERmRatBN7.2
Rnor_6.020846,286 - 846,450NCBIRnor6.0
Rnor_6.03138,051,024 - 138,051,188NCBIRnor6.0
Rnor_5.020830,647 - 830,811UniSTSRnor5.0
Rnor_5.03144,489,380 - 144,489,544UniSTSRnor5.0
RGSC_v3.43132,384,918 - 132,385,082UniSTSRGSC3.4
RGSC_v3.420663,415 - 663,579UniSTSRGSC3.4
Celera201,479,338 - 1,479,502UniSTS
Celera3130,208,882 - 130,209,046UniSTS
Cytogenetic Map3q41UniSTS
Cytogenetic Map20p12UniSTS


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_003751907   ⟹   XP_003751955
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.220704,091 - 705,776 (+)NCBI
Rnor_6.020844,893 - 846,592 (+)NCBI
Rnor_5.020829,250 - 830,953 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-5065 BioCyc
NCBI Gene 296197 ENTREZGENE
PhenoGen Dstnl1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-04-20 Dstnl1  destrin-like 1  LOC296197  similar to destrin  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2007-01-31 LOC296197  similar to destrin  Dstn_predicted  destrin (predicted)  Symbol and Name updated 1299863 PROVISIONAL
2005-01-12 Dstn_predicted  destrin (predicted)      Symbol and Name status set to approved 70820 APPROVED