Adipor1 (adiponectin receptor 1) - Rat Genome Database

Name: Adipor1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Adipor1 (adiponectin receptor 1) Rattus norvegicus

Analyze

Symbol:

Adipor1

Name:

adiponectin receptor 1

RGD ID:

1303151

Description:

Predicted to enable several functions, including adipokinetic hormone receptor activity; adiponectin binding activity; and identical protein binding activity. Involved in cytokine-mediated signaling pathway; negative regulation of cell growth; and positive regulation of signal transduction. Predicted to be active in plasma membrane. Biomarker of end stage renal disease; hyperglycemia; hyperinsulinism; and obesity. Human ortholog(s) of this gene implicated in breast cancer; macular degeneration; and prostate adenocarcinoma. Orthologous to human ADIPOR1 (adiponectin receptor 1); PARTICIPATES IN adiponectin signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-aminobenzamide; 9-cis,11-trans-octadecadienoic acid.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

adiponectin receptor protein 1; LOC289036

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ADIPOR1 (adiponectin receptor 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Adipor1 (adiponectin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Adipor1 (adiponectin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ADIPOR1 (adiponectin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ADIPOR1 (adiponectin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Adipor1 (adiponectin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ADIPOR1 (adiponectin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Adipor1 (adiponectin receptor 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	B3GNT4 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4)	HGNC	OMA
Alliance orthologs ³
Mus musculus (house mouse):	Adipor1 (adiponectin receptor 1)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Homo sapiens (human):	ADIPOR1 (adiponectin receptor 1)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	adipor1a (adiponectin receptor 1a)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Danio rerio (zebrafish):	adipor1b (adiponectin receptor 1b)	Alliance	DIOPT (Ensembl Compara\|OMA\|OrthoFinder\|PANTHER)
Drosophila melanogaster (fruit fly):	AdipoR	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	IZH1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	IZH2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	paqr-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	paqr-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	adipor1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)

Candidate Gene For:

Bp328

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	48,411,438 - 48,431,251 (+)	NCBI		GRCr8
mRatBN7.2	13	45,859,461 - 45,879,248 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	45,859,533 - 45,879,241 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	48,467,214 - 48,486,442 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	49,755,284 - 49,774,510 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	47,020,164 - 47,038,858 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	51,240,470 - 51,260,233 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	51,240,911 - 51,260,228 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	56,297,143 - 56,316,898 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	47,358,625 - 47,379,565 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	47,372,667 - 47,393,605 (+)	NCBI
Celera	13	46,187,909 - 46,207,055 (+)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

breast cancer (ISO)

Diabetic Cardiomyopathies (IEP)

end stage renal disease (IEP,ISO)

familial adult myoclonic epilepsy 5 (ISO)

Female Infertility (ISO)

Fetal Growth Retardation (IEP)

fundus dystrophy (ISO)

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

hyperglycemia (IEP)

hyperinsulinism (IEP)

Hypokalemic Periodic Paralysis, Type 1 (ISO)

Insulin Resistance (ISO)

macular degeneration (ISO)

myocardial infarction (ISO)

obesity (IEP,ISO)

parathyroid carcinoma (ISO)

prostate adenocarcinoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(-)-Arctigenin (ISO)

(-)-matairesinol (ISO)

1,2-dimethylhydrazine (ISO)

17alpha-ethynylestradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

25-hydroxycholesterol (ISO)

3,3',4,4',5-pentachlorobiphenyl (ISO)

3-aminobenzamide (EXP,ISO)

4,4'-sulfonyldiphenol (ISO)

9-cis,11-trans-octadecadienoic acid (EXP)

9-cis-retinoic acid (ISO)

aflatoxin B1 (ISO)

aldehydo-D-glucose (EXP)

Arctiin (ISO)

arsane (ISO)

arsenic atom (ISO)

Aurothioglucose (ISO)

benzo[a]pyrene (ISO)

bezafibrate (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP)

Brodifacoum (EXP)

cadmium atom (ISO)

cannabidiol (ISO)

CGP 52608 (ISO)

clofibrate (ISO)

Clofop (ISO)

cyclosporin A (EXP)

D-glucose (EXP)

dibutyl phthalate (ISO)

ethanol (EXP,ISO)

ethyl methanesulfonate (ISO)

fenthion (ISO)

folic acid (ISO)

formaldehyde (ISO)

furan (EXP)

gentamycin (EXP)

glucose (EXP)

gramine (ISO)

hexadecanoic acid (ISO)

hydralazine (ISO)

lead(0) (ISO)

linoleic acid (ISO)

lipopolysaccharide (ISO)

metformin (EXP)

methidathion (ISO)

methotrexate (ISO)

methoxychlor (EXP)

methyl methanesulfonate (ISO)

paracetamol (ISO)

paraquat (ISO)

paricalcitol (ISO)

perfluorooctanoic acid (ISO)

pirinixic acid (ISO)

progesterone (ISO)

resveratrol (EXP,ISO)

Sodium oleate (ISO)

Soman (EXP)

streptozocin (EXP)

tamoxifen (ISO)

terbufos (ISO)

testosterone (EXP)

troglitazone (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

adiponectin-activated signaling pathway (IBA,IMP,ISO)

fatty acid oxidation (ISO)

glucose homeostasis (ISO)

hormone-mediated signaling pathway (ISO)

leptin-mediated signaling pathway (IMP)

negative regulation of cell growth (IMP)

negative regulation of epithelial cell migration (ISO)

negative regulation of epithelial to mesenchymal transition (ISO)

negative regulation of non-canonical NF-kappaB signal transduction (ISO)

negative regulation of receptor signaling pathway via JAK-STAT (ISO)

positive regulation of cold-induced thermogenesis (ISO,ISS)

positive regulation of insulin receptor signaling pathway (IMP)

positive regulation of receptor signaling pathway via JAK-STAT (IMP)

regulation of glucose metabolic process (ISO)

regulation of lipid metabolic process (ISO)

Cellular Component

plasma membrane (IBA,ISO)

Molecular Function

adipokinetic hormone receptor activity (ISO)

adiponectin binding (ISO)

identical protein binding (ISO)

metal ion binding (IEA)

protein binding (ISO)

protein kinase binding (ISO)

signaling receptor activity (IBA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

adiponectin signaling pathway (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Adiponectin receptors gene expression in lymphocytes of obese and anorexic patients.	Alberti L, etal., Diabetes Obes Metab. 2007 May;9(3):344-9.
2.	Maternal docosahexaenoic acid increases adiponectin and normalizes IUGR-induced changes in rat adipose deposition.	Bagley HN, etal., J Obes. 2013;2013:312153. doi: 10.1155/2013/312153. Epub 2013 Mar 6.
3.	Expression of the adiponectin receptors AdipoR1 and AdipoR2 in lean rats and in obese Zucker rats.	Beylot M, etal., Metabolism. 2006 Mar;55(3):396-401.
4.	Adiponectin stimulates phosphorylation of AMP-activated protein kinase alpha in renal glomeruli.	Cammisotto PG and Bendayan M, J Mol Histol. 2008 Dec;39(6):579-84. Epub 2008 Oct 22.
5.	AdipoR1 mediates the anorexigenic and insulin/leptin-like actions of adiponectin in the hypothalamus.	Coope A, etal., FEBS Lett. 2008 Apr 30;582(10):1471-6. Epub 2008 Apr 3.
6.	Hyperglycemia- and hyperinsulinemia-induced alteration of adiponectin receptor expression and adiponectin effects in L6 myoblasts.	Fang X, etal., J Mol Endocrinol. 2005 Dec;35(3):465-76.
7.	Role of adiponectin receptors in endothelin-induced cellular hypertrophy in cultured cardiomyocytes and their expression in infarcted heart.	Fujioka D, etal., Am J Physiol Heart Circ Physiol. 2006 Jun;290(6):H2409-16. Epub 2006 Jan 13.
8.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
9.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
10.	[Relationship between adiponectin receptor 1 gene -3881T/C variant and glucose metabolism in the Chinese]	Hu C, etal., Zhonghua Yi Xue Yi Chuan Xue Za Zhi. 2007 Feb;24(1):27-30.
11.	Adiponectin receptor 1 gene (ADIPOR1) variant is associated with advanced age-related macular degeneration in Finnish population.	Kaarniranta K, etal., Neurosci Lett. 2012 Apr 4;513(2):233-7. doi: 10.1016/j.neulet.2012.02.050. Epub 2012 Feb 25.
12.	Adiponectin and adiponectin receptors in insulin resistance, diabetes, and the metabolic syndrome.	Kadowaki T, etal., J Clin Invest. 2006 Jul;116(7):1784-92.
13.	Polymorphisms of ADIPOQ and ADIPOR1 and prostate cancer risk.	Kaklamani V, etal., Metabolism. 2011 Sep;60(9):1234-43. doi: 10.1016/j.metabol.2011.01.005. Epub 2011 Mar 12.
14.	Variants of the adiponectin and adiponectin receptor 1 genes and breast cancer risk.	Kaklamani VG, etal., Cancer Res. 2008 May 1;68(9):3178-84. doi: 10.1158/0008-5472.CAN-08-0533.
15.	Analysis of the association between adiponectin, adiponectin receptor 1 and diabetic cardiomyopathy.	Li J, etal., Exp Ther Med. 2014 Apr;7(4):1023-1027. Epub 2014 Feb 12.
16.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
17.	Adiponectin reduces thermogenesis by inhibiting brown adipose tissue activation in mice.	Qiao L, etal., Diabetologia. 2014 May;57(5):1027-36. doi: 10.1007/s00125-014-3180-5. Epub 2014 Feb 16.
18.	GOA pipeline	RGD automated data pipeline
19.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
20.	Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.	Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
21.	No association between polymorphisms in LEP, LEPR, ADIPOQ, ADIPOR1, or ADIPOR2 and postmenopausal breast cancer risk.	Teras LR, etal., Cancer Epidemiol Biomarkers Prev. 2009 Sep;18(9):2553-7. doi: 10.1158/1055-9965.EPI-09-0542. Epub 2009 Sep 1.
22.	Cloning of adiponectin receptors that mediate antidiabetic metabolic effects.	Yamauchi T, etal., Nature 2003 Jun 12;423(6941):762-9.
23.	Changes of adiponectin and its receptors in rats following chronic renal failure.	Yu Y, etal., Ren Fail. 2014 Feb;36(1):92-7. doi: 10.3109/0886022X.2013.830975. Epub 2013 Sep 13.

Additional References at PubMed

PMID:16988040	PMID:17006986	PMID:17569760	PMID:17906114	PMID:18256313	PMID:18353182	PMID:18815186	PMID:18971219	PMID:19233263	PMID:19500219	PMID:19946888	PMID:20206611
PMID:20600433	PMID:20846698	PMID:21155820	PMID:21543208	PMID:21552570	PMID:21852089	PMID:22012952	PMID:22873349	PMID:23043361	PMID:23349663	PMID:23378066	PMID:23667684
PMID:23776679	PMID:24724805	PMID:24742672	PMID:25099270	PMID:25536648	PMID:28051329	PMID:32940654	PMID:34973346	PMID:35271883	PMID:37758935

Genomics

Comparative Map Data

Adipor1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	48,411,438 - 48,431,251 (+)	NCBI		GRCr8
mRatBN7.2	13	45,859,461 - 45,879,248 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	45,859,533 - 45,879,241 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	48,467,214 - 48,486,442 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	49,755,284 - 49,774,510 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	47,020,164 - 47,038,858 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	51,240,470 - 51,260,233 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	51,240,911 - 51,260,228 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	56,297,143 - 56,316,898 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	47,358,625 - 47,379,565 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	47,372,667 - 47,393,605 (+)	NCBI
Celera	13	46,187,909 - 46,207,055 (+)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

ADIPOR1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	202,940,825 - 202,958,572 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	202,940,826 - 202,958,572 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	202,909,953 - 202,927,700 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	201,176,576 - 201,194,034 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	199,641,610 - 199,659,068	NCBI
Celera	1	176,039,207 - 176,056,946 (-)	NCBI		Celera
Cytogenetic Map	1	q32.1	ENTREZGENE
HuRef	1	174,075,616 - 174,093,389 (-)	NCBI		HuRef
CHM1_1	1	204,332,195 - 204,349,939 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	202,203,545 - 202,221,296 (-)	NCBI		T2T-CHM13v2.0

Adipor1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	134,343,116 - 134,361,089 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	134,343,116 - 134,361,089 (+)	Ensembl		GRCm39 Ensembl
GRCm38	1	134,415,378 - 134,433,351 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	134,415,378 - 134,433,351 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	136,312,044 - 136,328,918 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	136,231,878 - 136,248,752 (+)	NCBI		MGSCv36	mm8
Celera	1	137,022,451 - 137,039,305 (+)	NCBI		Celera
Cytogenetic Map	1	E4	NCBI
cM Map	1	58.22	NCBI

Adipor1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	38,936,588 - 38,955,352 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	38,939,167 - 38,955,647 (-)	NCBI	ChiLan1.0	ChiLan1.0

ADIPOR1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	46,419,719 - 46,437,276 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	46,386,741 - 46,404,296 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	178,542,496 - 178,560,055 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	182,837,589 - 182,854,749 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	182,837,589 - 182,854,782 (-)	Ensembl	panpan1.1		panPan2

ADIPOR1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	240,035 - 254,287 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	240,065 - 282,845 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	294,939 - 308,904 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	249,755 - 263,729 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	249,707 - 293,556 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	238,441 - 252,403 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	347,515 - 361,478 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	370,491 - 384,457 (+)	NCBI		UU_Cfam_GSD_1.0

Adipor1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	72,423,786 - 72,440,118 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936567	1,658,383 - 1,676,199 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936567	1,658,405 - 1,674,794 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ADIPOR1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	26,445,993 - 26,462,346 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	26,453,242 - 26,462,549 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	27,222,681 - 27,239,402 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Adipor1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624807	7,896,508 - 7,912,088 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Adipor1
158 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	65
Count of miRNA genes:	49
Interacting mature miRNAs:	60
Transcripts:	ENSRNOT00000005551
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	1	101056920	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	1	101056920	Rat
1354666	Bp244	Blood pressure QTL 244	4.9		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	1	101056920	Rat
1581554	Pur11	Proteinuria QTL 11			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	5994833	77046787	Rat
1581573	Uae36	Urinary albumin excretion QTL 36			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	13	5994833	77046787	Rat
1581570	Eae17	Experimental allergic encephalomyelitis QTL 17	4.1		nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	8897350	101631289	Rat
7411662	Foco29	Food consumption QTL 29	20.8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	13	9313465	54313465	Rat
9589141	Insul28	Insulin level QTL 28	10.82	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	13	9313465	54313465	Rat
2317040	Aia21	Adjuvant induced arthritis QTL 21	2.75		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	9831541	54831541	Rat
2317046	Aia8	Adjuvant induced arthritis QTL 8	3.9700000286102295		joint integrity trait (VT:0010548)	left rear ankle joint diameter (CMO:0002149)	13	9831541	54831541	Rat
2302275	Gluco37	Glucose level QTL 37	3.8		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	13	11929449	46193066	Rat
631645	Bp121	Blood pressure QTL 121	3.3		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	14915655	59915655	Rat
9589164	Gluco66	Glucose level QTL 66	6.67	0.001	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	13	15158722	60158722	Rat
1331784	Bp222	Blood pressure QTL 222	2.944		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	17694436	53050594	Rat
7207885	Glom27	Glomerulus QTL 27	3.9		kidney glomerulus integrity trait (VT:0010546)	kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)	13	20605871	101339738	Rat
61391	Bp5	Blood pressure QTL 5	5.6		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	22301875	67301875	Rat
70170	Eae14	Experimental allergic encephalomyelitis QTL 14		0.0024	nervous system integrity trait (VT:0010566)	experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)	13	23203448	68203448	Rat
6893338	Cm76	Cardiac mass QTL 76	0	0.99	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	23692969	68692969	Rat
1558644	Cm45	Cardiac mass QTL 45	3.6	0.002	heart mass (VT:0007028)	heart wet weight (CMO:0000069)	13	23692969	68692969	Rat
1354621	Rf47	Renal function QTL 47	3.7		kidney renin amount (VT:0010559)	kidney renin level (CMO:0002166)	13	30395351	101056920	Rat
2301962	Cm72	Cardiac mass QTL 72	4.12		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	13	31241331	58363171	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	31241331	93395974	Rat
70181	BpQTLcluster11	Blood pressure QTL cluster 11	6.922		arterial blood pressure trait (VT:2000000)	absolute change in mean arterial blood pressure (CMO:0000533)	13	31241331	93395974	Rat
2303563	Bw89	Body weight QTL 89	6		body mass (VT:0001259)	body weight (CMO:0000012)	13	32284471	77284471	Rat
61340	Bp25	Blood pressure QTL 25	4.2	0.004	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	34535218	79535218	Rat
12879477	Bp401	Blood pressure QTL 401			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	37262092	82262092	Rat
61349	Bp31	Blood pressure QTL 31	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	37374509	82374509	Rat
70220	Bp55	Blood pressure QTL 55	5.75		arterial blood pressure trait (VT:2000000)	blood pressure measurement (CMO:0000003)	13	37374509	82374509	Rat
4889861	Pur29	Proteinuria QTL 29	13.8	0.005	urine total protein amount (VT:0000032)	urine total protein excretion rate (CMO:0000756)	13	37415584	80753406	Rat
1331750	Bp220	Blood pressure QTL 220	2.98		arterial blood pressure trait (VT:2000000)	diastolic blood pressure (CMO:0000005)	13	37415584	82415584	Rat
1549897	Stresp12	Stress response QTL 12	3.35		stress-related behavior trait (VT:0010451)	number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)	13	38433408	83433408	Rat
619615	Bp80	Blood pressure QTL 80		0.0354	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	13	39754544	84754544	Rat
4145117	Mcs27	Mammary carcinoma susceptibility QTL 27		0.0001	mammary gland integrity trait (VT:0010552)	post-insult time to mammary tumor formation (CMO:0000345)	13	43437904	47841255	Rat
6893344	Cm79	Cardiac mass QTL 79	1.5	0.04	heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	13	43720770	62022792	Rat
12879444	Bp397	Blood pressure QTL 397			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45049404	90049404	Rat
12879472	Bp399	Blood pressure QTL 399			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45228358	47841255	Rat
12879471	Bp398	Blood pressure QTL 398			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45514719	90514719	Rat
12879441	Bp396	Blood pressure QTL 396			arterial blood pressure trait (VT:2000000)	mean arterial blood pressure (CMO:0000009)	13	45699983	90699983	Rat

Markers in Region

RH16184

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	45,878,448 - 45,878,567 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	51,259,434 - 51,259,552	NCBI	Rnor6.0
Rnor_5.0	13	56,316,099 - 56,316,217	UniSTS	Rnor5.0
RGSC_v3.4	13	47,378,768 - 47,378,886	UniSTS	RGSC3.4
Celera	13	46,206,258 - 46,206,376	UniSTS
Cytogenetic Map	13	q13	UniSTS

AA858656

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	13	45,878,742 - 45,878,942 (+)	MAPPER	mRatBN7.2
Rnor_6.0	13	51,259,728 - 51,259,927	NCBI	Rnor6.0
Rnor_5.0	13	56,316,393 - 56,316,592	UniSTS	Rnor5.0
RGSC_v3.4	13	47,379,062 - 47,379,261	UniSTS	RGSC3.4
Celera	13	46,206,552 - 46,206,751	UniSTS
RH 3.4 Map	13	170.0	UniSTS
Cytogenetic Map	13	q13	UniSTS

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium	3	43	57	41	19	41	8	11	74	35	41	11	8
Low
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_207587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006249852	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039090439	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063272085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC106215	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC061838	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH473958	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ148391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ217287	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ233463	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	FQ234908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000013	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSRNOT00000005551 ⟹ ENSRNOP00000005551

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	45,859,533 - 45,879,241 (+)	Ensembl
Rnor_6.0 Ensembl	13	51,240,911 - 51,260,228 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000102094 ⟹ ENSRNOP00000091236

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	45,867,524 - 45,879,241 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000119052 ⟹ ENSRNOP00000085986

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	13	45,867,846 - 45,879,241 (+)	Ensembl

RefSeq Acc Id:

NM_207587 ⟹ NP_997470

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,411,930 - 48,431,251 (+)	NCBI
mRatBN7.2	13	45,859,922 - 45,879,246 (+)	NCBI
Rnor_6.0	13	51,240,911 - 51,260,231 (+)	NCBI
Rnor_5.0	13	56,297,143 - 56,316,898 (+)	NCBI
RGSC_v3.4	13	47,358,625 - 47,379,565 (+)	RGD
Celera	13	46,187,909 - 46,207,055 (+)	RGD

Sequence:

show sequence

AACACCGGCCACCCAGGGCCGGGAACCCTAAGGCCCCCACCCGCGATCCGCAGGTCAAACGTGA
CGGCTCTCCCTCCTGGATAGGGTCGGCGGGGAGGTTGATGGAGAGTCGACAGGCCTAAGTGTCC
ATCATCACTGGGAGATCTCTGCCCTCTGGGGCTGAGAGACCCCAACCTCTCCTCAAGCTGAAGC
TGCAAGGCACTGAGGTACCAGCCAGATGTCTTCCCACAAAGGATCTGCCGTGGCCCAGGGCAAT
GGGGCTCCTTCTAGTAACAGAGAAGCGGACACGGTGGAGCTGGCTGAGCTGGGGCCCCTGCTGG
AGGAGAAGGGTAAGCGGGCAGCCACCAGCCCAGCCAAGGCTGAAGAAGAACAAGCATGCCCCGT
GCCTCAGGAGGAGGAGGAGGAGGTGCGGGTGCTGACCCTTCCTCTGCAAGCCCACCATGCCATG
GAGAAGATGGAGGAGTTCGTATATAAGGTCTGGGAGGGGCGTTGGAGGGTCATCCCATACGATG
TGCTTCCTGACTGGCTGAAAGACAATGACTACCTGCTACATGGCCACAGACCACCTATGCCCTC
CTTCCGGGCTTGCTTCAAGAGCATCTTCCGCATCCACACAGAAACTGGCAACATCTGGACACAT
TTGCTTGGTTTTGTGCTATTTCTCTTTCTGGGAATCTTGACCATGCTCAGACCAAATATGTACT
TCATGGCTCCCCTCCAGGAGAAGGTGGTCTTCGGGATGTTCTTCCTGGGTGCAGTGCTCTGCCT
CAGCTTCTCCTGGCTTTTCCACACCGTCTACTGTCATTCAGAGAAGGTCTCTCGCACTTTTTCC
AAACTGGACTATTCAGGGATTGCTCTACTGATTATGGGGAGCTTCGTCCCCTGGCTCTATTACT
CCTTCTACTGCTCCCCACAGCCACGGCTCATCTACCTCTCCATCGTCTGTGTCCTGGGCATCTC
TGCCATCATTGTGGCACAGTGGGACCGGTTTGCCACTCCCAAGCACCGGCAGACAAGAGCAGGA
GTGTTCCTGGGACTTGGCTTGAGTGGTGTTGTACCCACCATGCACTTTACTATCGCTGAGGGCT
TTGTCAAGGCCACCACAGTGGGCCAGATGGGCTGGTTCTTCCTCATGGCTGTGATGTACATCAC
CGGCGCTGGCCTTTATGCTGCTCGGATTCCTGAGCGCTTCTTTCCTGGAAAATTTGACATATGG
TTCCAGTCTCATCAGATTTTCCATGTCCTGGTGGTGGCAGCGGCTTTCGTCCACTTCTATGGGG
TGTCCAACCTACAGGAATTCCGTTACGGCCTAGAGGGTGGATGTACCGATGACTCCCTTCTCTG
AGCCTTCCCACCTGAGGGTTGGTGGAGGAACTTCCCAAGTGCTTTTAAAAATAACTTCTTTGCT
GAAGTACGAGGAAGAGTCTGAGTTGTCTGTTTCTAGAAGAAACCTCTTAGAGAATCGCACCAGT
GACCCTTCAGCCCACTGGCACAGCCTCCGGGCCGTACACTTCCCATGTGCATTCCTAGCAGTCA
CCTCAGCAAGGCAACTGCTGGTCCTTCACAGACAGGACGTGGGAGCTCATGTTGAGATTTTACC
CATTCCTTCAGCCATTTGGGGAAAAAATTATGAACTGGGATTCTTCAGAAATTAAGTGTTGTTT
TTTCTTGAAGAAAATATCCCTCCCTTACCCTCCTCCTTACTTTGTAACCTGGCGGATGACAGGC
CATCCATTTTTGTAGCACACTTTTCAGAAACAAGTATAACCTGGTCCCATCTTTCTAGGACAAA
CAAAGCCACGCCTTGATGTAGCCCGGCTAATCATGGAAGTATGTCCAGGCTTCAAGTAACTTGA
GTTTAAATCCTTTTTTTTTTTTTTCTTGGCAGAGTAATGTAAAATTAAAATGGGGAAGATATTT
AATATTTAATACTAAGCTTTAAAAAGAAACCTGCTATCACTGCTGTGTATCTTGATGCAAAGAC
TATGGTGATAATAAAAGAAAGTACAGACCGCTTGGCATTCAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA

hide sequence

RefSeq Acc Id:

XM_006249852 ⟹ XP_006249914

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,411,438 - 48,431,245 (+)	NCBI
mRatBN7.2	13	45,859,461 - 45,879,248 (+)	NCBI
Rnor_6.0	13	51,240,470 - 51,260,233 (+)	NCBI
Rnor_5.0	13	56,297,143 - 56,316,898 (+)	NCBI

Sequence:

show sequence

AAGGTGACGCGGCTGCGGAGATGACGCCGTGCGGTCGCGCGGCCCTTCCGGCGCGGGCAGGGCG
CTGAGGATCCGGCGCCCCTCGGCCGCAGGCCGCCTCCAGAGCCGCGGGATGTAGCGCCCCGGCC
TGCGGCCCCCAGCAGAGGCAGCCAGCCAGGCCTGTCCATCATCACTGGGAGATCTCTGCCCTCT
GGGGCTGAGAGACCCCAACCTCTCCTCAAGCTGAAGCTGCAAGGCACTGAGGTACCAGCCAGAT
GTCTTCCCACAAAGGATCTGCCGTGGCCCAGGGCAATGGGGCTCCTTCTAGTAACAGAGCAGCG
GACACGGTGGAGCTGGCTGAGCTGGGGCCCCTGCTGGAGGAGAAGGGTAAGCGGGCAGCCACCA
GCCCAGCCAAGGCTGAAGAAGAACAAGCATGCCCCGTGCCTCAGGAGGAGGAGGAGGAGGTGCG
GGTGCTGACCCTTCCTCTGCAAGCCCACCATGCCATGGAGAAGATGGAGGAGTTCGTATATAAG
GTCTGGGAGGGGCGTTGGAGGGTCATCCCATACGATGTGCTTCCTGACTGGCTGAAAGACAATG
ACTACCTGCTACATGGCCACAGACCACCTATGCCCTCCTTCCGGGCTTGCTTCAAGAGCATCTT
CCGCATCCACACAGAAACTGGCAACATCTGGACACATTTGCTTGGTTTTGTGCTATTTCTCTTT
CTGGGAATCTTGACCATGCTCAGACCAAATATGTACTTCATGGCTCCCCTCCAGGAGAAGGTGG
TCTTCGGGATGTTCTTCCTGGGTGCAGTGCTCTGCCTCAGCTTCTCCTGGCTTTTCCACACCGT
CTACTGTCATTCAGAGAAGGTCTCTCGCACTTTTTCCAAACTGGACTATTCAGGGATTGCTCTA
CTGATTATGGGGAGCTTCGTCCCCTGGCTCTATTACTCCTTCTACTGCTCCCCACAGCCACGGC
TCATCTACCTCTCCATCGTCTGTGTCCTGGGCATCTCTGCCATCATTGTGGCACAGTGGGACCG
GTTTGCCACTCCCAAGCACCGGCAGACAAGAGCAGGAGTGTTCCTGGGACTTGGCTTGAGTGGT
GTTGTACCCACCATGCACTTTACTATCGCTGAGGGCTTTGTCAAGGCCACCACAGTGGGCCAGA
TGGGCTGGTTCTTCCTCATGGCTGTGATGTACATCACCGGCGCTGGCCTTTATGCTGCTCGGAT
TCCTGAGCGCTTCTTTCCTGGAAAATTTGACATATGGTTCCAGTCTCATCAGATTTTCCATGTC
CTGGTGGTGGCAGCGGCTTTCGTCCACTTCTATGGGGTGTCCAACCTACAGGAATTCCGTTACG
GCCTAGAGGGTGGATGTACCGATGACTCCCTTCTCTGAGCCTTCCCACCTGAGGGTTGGTGGAG
GAACTTCCCAAGTGCTTTTAAAAATAACTTCTTTGCTGAAGTACGAGGAAGAGTCTGAGTTGTC
TGTTTCTAGAAGAAACCTCTTAGAGAATCGCACCAGTGACCCTTCAGCCCACTGGCACAGCCTC
CGGGCCGTACACTTCCCATGTGCATTCCTAGCAGTCACCTCAGCAAGGCAACTGCTGGTCCTTC
ACAGACAGGACGTGGGAGCTCATGTTGAGATTTTACCCATTCCTTCAGCCATTTTGGGGAAAAA
ATTATGAACTGGGATTCTTCAGAAATTAAGTGTTGTTTTTTCTTGAAGAAAATATCCCTCCCTT
ACCCTCCTCCTTACTTTGTAACCTGGCGGATGACAGGCCATCCATTTTTGTAGCACACTTTTCA
GAAACAAGTATAACCTGGTCCCATCTTTCTAGGACAAACAAAGCCACGCCTTGATGTAGCCCGG
CTAATCATGGAAGTATGTCCAGGCTTCAAGTAACTTGAGTTTAAATCCTTTTTTTTTTTTTTCT
TGGCAGAGTAATGTAAAATTAAAATGGGGAAGATATTTAATATTTAATACTAAGCTTTAAAAAG
AAACCTGCTATCACTGCTGTGTATCTTGATGCAAAGACTATGGTGATAATAAAAGAAAGTACAG
ACCGCTTGGCATTCAAAGA

hide sequence

RefSeq Acc Id:

XM_039090439 ⟹ XP_038946367

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,416,881 - 48,431,245 (+)	NCBI
mRatBN7.2	13	45,864,881 - 45,879,240 (+)	NCBI

RefSeq Acc Id:

XM_063272083 ⟹ XP_063128153

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,411,773 - 48,431,245 (+)	NCBI

RefSeq Acc Id:

XM_063272084 ⟹ XP_063128154

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,411,773 - 48,431,245 (+)	NCBI

RefSeq Acc Id:

XM_063272085 ⟹ XP_063128155

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	13	48,411,773 - 48,431,245 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_997470	(Get FASTA)	NCBI Sequence Viewer
	XP_006249914	(Get FASTA)	NCBI Sequence Viewer
	XP_038946367	(Get FASTA)	NCBI Sequence Viewer
	XP_063128153	(Get FASTA)	NCBI Sequence Viewer
	XP_063128154	(Get FASTA)	NCBI Sequence Viewer
	XP_063128155	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH61838	(Get FASTA)	NCBI Sequence Viewer
	AAZ76713	(Get FASTA)	NCBI Sequence Viewer
	EDM09727	(Get FASTA)	NCBI Sequence Viewer
	EDM09728	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000005551
	ENSRNOP00000005551.3
	ENSRNOP00000085986.1
	ENSRNOP00000091236
	ENSRNOP00000091236.1

RefSeq Acc Id:

NP_997470 ⟸ NM_207587

- UniProtKB:

G3V6I6 (UniProtKB/TrEMBL), A6ICB9 (UniProtKB/TrEMBL), Q3YAF8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSSHKGSAVAQGNGAPSSNREADTVELAELGPLLEEKGKRAATSPAKAEEEQACPVPQEEEEEV
RVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFRACFKSI
FRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQEKVVFGMFFLGAVLCLSFSWLFHT
VYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLSIVCVLGISAIIVAQWD
RFATPKHRQTRAGVFLGLGLSGVVPTMHFTIAEGFVKATTVGQMGWFFLMAVMYITGAGLYAAR
IPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVSNLQEFRYGLEGGCTDDSLL

hide sequence

RefSeq Acc Id:	XP_006249914 ⟸ XM_006249852
- Peptide Label:	isoform X1
- UniProtKB:	G3V6I6 (UniProtKB/TrEMBL), A6ICB9 (UniProtKB/TrEMBL), Q3YAF8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSSHKGSAVAQGNGAPSSNRAADTVELAELGPLLEEKGKRAATSPAKAEEEQACPVPQEEEEEV RVLTLPLQAHHAMEKMEEFVYKVWEGRWRVIPYDVLPDWLKDNDYLLHGHRPPMPSFRACFKSI FRIHTETGNIWTHLLGFVLFLFLGILTMLRPNMYFMAPLQEKVVFGMFFLGAVLCLSFSWLFHT VYCHSEKVSRTFSKLDYSGIALLIMGSFVPWLYYSFYCSPQPRLIYLSIVCVLGISAIIVAQWD RFATPKHRQTRAGVFLGLGLSGVVPTMHFTIAEGFVKATTVGQMGWFFLMAVMYITGAGLYAAR IPERFFPGKFDIWFQSHQIFHVLVVAAAFVHFYGVSNLQEFRYGLEGGCTDDSLL hide sequence

RefSeq Acc Id:

ENSRNOP00000005551 ⟸ ENSRNOT00000005551

RefSeq Acc Id:	XP_038946367 ⟸ XM_039090439
- Peptide Label:	isoform X1
- UniProtKB:	G3V6I6 (UniProtKB/TrEMBL), A6ICB9 (UniProtKB/TrEMBL), Q3YAF8 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSRNOP00000085986 ⟸ ENSRNOT00000119052

RefSeq Acc Id:

ENSRNOP00000091236 ⟸ ENSRNOT00000102094

RefSeq Acc Id:	XP_063128153 ⟸ XM_063272083
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063128154 ⟸ XM_063272084
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_063128155 ⟸ XM_063272085
- Peptide Label:	isoform X1

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-G3V6I6-F1-model_v2	AlphaFold	G3V6I6	1-375	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Promoters

RGD ID:

13698831

Promoter ID:

EPDNEW_R9356

Type:

initiation region

Name:

Adipor1_1

Description:

adiponectin receptor 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Rat Assembly	Chr	Position (strand)	Source
Rnor_6.0	13	51,240,816 - 51,240,876	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1303151	AgrOrtholog
BioCyc Gene	G2FUF-18234	BioCyc
Ensembl Genes	ENSRNOG00000004143	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000005551.5	UniProtKB/TrEMBL
	ENSRNOT00000102094	ENTREZGENE
	ENSRNOT00000102094.1	UniProtKB/TrEMBL
	ENSRNOT00000119052.1	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:5599938	IMAGE-MGC_LOAD
InterPro	HlyIII-related	UniProtKB/TrEMBL
KEGG Report	rno:289036	UniProtKB/TrEMBL
MGC_CLONE	MGC:72623	IMAGE-MGC_LOAD
NCBI Gene	289036	ENTREZGENE
PANTHER	ADIPONECTIN RECEPTOR PROTEIN 1	UniProtKB/TrEMBL
	HlyIII_related	UniProtKB/TrEMBL
Pfam	HlyIII	UniProtKB/TrEMBL
PhenoGen	Adipor1	PhenoGen
RatGTEx	ENSRNOG00000004143	RatGTEx
UniProt	A0A8I6A3X9_RAT	UniProtKB/TrEMBL
	A0A8I6AFR8_RAT	UniProtKB/TrEMBL
	A6ICB9	ENTREZGENE, UniProtKB/TrEMBL
	A6ICC0_RAT	UniProtKB/TrEMBL
	G3V6I6	ENTREZGENE, UniProtKB/TrEMBL
	Q3YAF8	ENTREZGENE, UniProtKB/TrEMBL
	Q6P746_RAT	UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2006-03-30	Adipor1	adiponectin receptor 1	LOC289036		Symbol updated	1299863	APPROVED
2005-02-14	LOC289036	adiponectin receptor 1			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

RGD Manual Annotations