LOC108352027 (40S ribosomal protein S28-like) - Rat Genome Database

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Gene: LOC108352027 (40S ribosomal protein S28-like) Rattus norvegicus
Analyze
Symbol: LOC108352027
Name: 40S ribosomal protein S28-like
RGD ID: 11446793
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: small ribosomal subunit protein eS28-like
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8959,007,851 - 59,008,125 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.2951,515,970 - 51,516,251 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0956,454,946 - 56,455,168 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Celera949,123,876 - 49,124,098 (+)NCBICelera
Cytogenetic Map9q31NCBI
JBrowse:




References

Genomics


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)9671488884474983Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)956047863101047863Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)94002992585029925Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)93125043268875676Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)94445825699506504Rat
61450Ciaa3CIA Autoantibody QTL 36.5blood autoantibody amount (VT:0003725)calculated serum anti-type 2 collagen antibody titer (CMO:0001279)92956766474567664Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)94445825685262605Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92956766483835942Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)94172029586720295Rat
7207805Bmd88Bone mineral density QTL 884femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)93125043265651574Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)944458256121768150Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)93922018684220186Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)948718864108376862Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)94002992585029925Rat
1598849Memor17Memory QTL 172.2exploratory behavior trait (VT:0010471)difference between duration of physical contact or close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)95746049778547958Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)95450650499506504Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)93496059079960590Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
mesenchyme
1 1

Sequence


RefSeq Acc Id: XM_017596939   ⟹   XP_017452428
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8959,007,851 - 59,008,125 (+)NCBI
mRatBN7.2951,515,970 - 51,516,251 (+)NCBI
Rnor_6.0956,454,946 - 56,455,168 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_017452428 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_017452428   ⟸   XM_017596939
- Sequence:


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-27580 BioCyc
NCBI Gene LOC108352027 ENTREZGENE
PhenoGen LOC108352027 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 LOC108352027  40S ribosomal protein S28-like      Symbol and Name status set to provisional 70820 PROVISIONAL