Rpl31l14 (ribosomal protein L31 like 14) - Rat Genome Database

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Gene: Rpl31l14 (ribosomal protein L31 like 14) Rattus norvegicus
Analyze
No known orthologs.
Symbol: Rpl31l14
Name: ribosomal protein L31 like 14
RGD ID: 11431277
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to be part of cytosolic large ribosomal subunit.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: 60S ribosomal protein L31 pseudogene; 60S ribosomal protein L31-like; large ribosomal subunit protein eL31-like; LOC108350671; ribosomal protein L31 like 5; Rpl31l5
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8435,269,044 - 35,277,346 (+)NCBIGRCr8GRCr8GRCr8
mRatBN7.2434,302,562 - 34,310,161 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl434,309,777 - 34,310,151 (+)EnsemblmRatBN7.2
mRatBN7.2 Ensembl896,875,636 - 96,876,010 (-)EnsemblmRatBN7.2
Rnor_6.0431,704,275 - 31,705,138 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Celera429,833,243 - 29,834,106 (+)NCBICelera
Cytogenetic Map4q21NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.

Genomics

Variants

.
Variants in Rpl31l14
22 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2302371Stl22Serum triglyceride level QTL 225.15blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)41308014658080146Rat
2303585Bw86Body weight QTL 864body mass (VT:0001259)body weight (CMO:0000012)41564430960644309Rat
5685012Bmd87Bone mineral density QTL 875.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)43511329080113290Rat
8552906Pigfal3Plasma insulin-like growth factor 1 level QTL 3blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)41103870656038706Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)427730518170099664Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)4135396961Rat
6478766Anxrr47Anxiety related response QTL 470.09637locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)41103870656038706Rat
70222Eae2Experimental allergic encephalomyelitis QTL 24.3nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)42228845340471598Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)426234499134199155Rat
631642Stl2Serum triglyceride level QTL 23.3blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)4589457557613242Rat
6478769Anxrr48Anxiety related response QTL 480.02514locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)41103870656038706Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41170660492690519Rat
2313401Anxrr27Anxiety related response QTL 27aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)41890069763900697Rat
631209Bw2Body weight QTL24.2retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)4145429897Rat
8552803Bw144Body weight QTL 14416body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)4135396961Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)427862204126119996Rat
8694374Bw155Body weight QTL 1553.390.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)41103870656038706Rat
8552801Bw143Body weight QTL 1437.3body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)4135396961Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45889999148002343Rat
61412Pia2Pristane induced arthritis QTL 23.9joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)42228845363245191Rat
8552807Vie4Viral induced encephalitis QTL 47.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)41890069763900697Rat
6478724Anxrr35Anxiety related response QTL 350.00449defecation behavior trait (VT:0010462)defecation measurement (CMO:0000997)41103870656038706Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)43044896182336920Rat
61415Eae11Experimental allergic encephalomyelitis QTL 112.9nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)4140471598Rat
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4588999950889999Rat
8552809Vie5Viral induced encephalitis QTL 525.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)4135396961Rat
7387227Uae40Urinary albumin excretion QTL 402.90.0052urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)41891315163913151Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42786220462997402Rat
1358203Stl19Serum triglyceride level QTL 192.80.002blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)42192515166925151Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)4163900697Rat
9590304Scort17Serum corticosterone level QTL 174.960.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)41103870656038706Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)433538597116185060Rat
11530004Niddm71Non-insulin dependent diabetes mellitus QTL 710.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)43353881653719714Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)412212457182430611Rat
1354665Stl10Serum triglyceride level QTL 103.57blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)42228845345429897Rat
1300141Bp178Blood pressure QTL 178arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)41075870140490708Rat


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
hemolymphoid system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
sensory system
visual system
2 1 2 19 41 68 49 7 20 17 9 8 8

Sequence


Ensembl Acc Id: ENSRNOT00000047850   ⟹   ENSRNOP00000046953
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl434,309,777 - 34,310,151 (+)Ensembl
RefSeq Acc Id: XM_039108602   ⟹   XP_038964530
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8435,269,044 - 35,277,346 (+)NCBI
mRatBN7.2434,302,563 - 34,310,161 (+)NCBI
RefSeq Acc Id: XM_039108603   ⟹   XP_038964531
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8435,275,126 - 35,277,346 (+)NCBI
mRatBN7.2434,309,049 - 34,310,161 (+)NCBI
RefSeq Acc Id: XM_063286822   ⟹   XP_063142892
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8435,269,609 - 35,277,324 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038964530 (Get FASTA)   NCBI Sequence Viewer  
  XP_038964531 (Get FASTA)   NCBI Sequence Viewer  
  XP_063142892 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000049635.2
  ENSRNOP00000104875
  ENSRNOP00000104875.1
RefSeq Acc Id: XP_038964530   ⟸   XM_039108602
- UniProtKB: D3Z8W1 (UniProtKB/TrEMBL),   D3ZU04 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038964531   ⟸   XM_039108603
- UniProtKB: D3Z8W1 (UniProtKB/TrEMBL),   D3ZU04 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000046953   ⟸   ENSRNOT00000047850
RefSeq Acc Id: XP_063142892   ⟸   XM_063286822
- UniProtKB: D3Z8W1 (UniProtKB/TrEMBL),   D3ZU04 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z8W1-F1-model_v2 AlphaFold D3Z8W1 1-124 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:11431277 AgrOrtholog
BioCyc Gene G2FUF-45697 BioCyc
Ensembl Genes ENSRNOG00000011501 UniProtKB/TrEMBL
  ENSRNOG00000030296 Ensembl
  ENSRNOG00000064781 Ensembl
  ENSRNOG00000089299 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000042885.3 UniProtKB/TrEMBL
  ENSRNOT00000163326 ENTREZGENE
  ENSRNOT00000163326.1 UniProtKB/TrEMBL
Gene3D-CATH 3.10.440.10 UniProtKB/TrEMBL
InterPro Ribosomal_L31e UniProtKB/TrEMBL
  Ribosomal_L31e_dom_sf UniProtKB/TrEMBL
NCBI Gene LOC108350671 ENTREZGENE
PANTHER 60S RIBOSOMAL PROTEIN L31 UniProtKB/TrEMBL
  PTHR10956 UniProtKB/TrEMBL
Pfam Ribosomal_L31e UniProtKB/TrEMBL
PhenoGen Rpl31l14 PhenoGen
RatGTEx ENSRNOG00000011501 RatGTEx
  ENSRNOG00000030296 RatGTEx
  ENSRNOG00000064781 RatGTEx
  ENSRNOG00000089299 RatGTEx
SMART Ribosomal_L31e UniProtKB/TrEMBL
Superfamily-SCOP SSF54575 UniProtKB/TrEMBL
UniProt A0ABK0LTP6_RAT UniProtKB/TrEMBL
  D3Z8W1 ENTREZGENE
  D3ZU04 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-10-13 Rpl31l14  ribosomal protein L31 like 14  Rpl31l5  ribosomal protein L31 like 5  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2023-09-19 Rpl31l5  ribosomal protein L31 like 5  LOC108350671  60S ribosomal protein L31 pseudogene  Symbol and Name Changed 1299863 APPROVED
2016-08-02 LOC108350671  60S ribosomal protein L31 pseudogene      Symbol and Name status set to provisional 70820 PROVISIONAL