| 61334 | Gluco17 | Glucose level QTL 17 | 6.3 | | Glucose level | uptake | 12 | 1 | 12240883 | Rat | n/a | region | qtl |
| 1357337 | Gluco3 | Glucose level QTL 3 | 1.9 | | Glucose level | insulin-mediated glucose uptake | 12 | 1 | 12240883 | Rat | n/a | region | qtl |
| 2303568 | Bw88 | Body weight QTL 88 | 3 | | Body weight | | 12 | 1 | 25457135 | Rat | n/a | region | qtl |
| 6893681 | Bw109 | Body weight QTL 109 | 2.3 | .004 | Body weight | salt-loaded | 12 | 1 | 25938641 | Rat | n/a | region | qtl |
| 61331 | Eau2 | Experimental allergic uveoretinitis QTL 2 | | .0005 | Uvea inflammation score | | 12 | 1 | 29130348 | Rat | n/a | region | qtl |
| 1598855 | Bp294 | Blood pressure QTL 294 | 3.5 | | Blood pressure | systolic | 12 | 1 | 35270263 | Rat | n/a | region | qtl |
| 2303575 | Insul14 | Insulin level QTL 14 | 4 | | Insulin level | | 12 | 1 | 43562201 | Rat | n/a | region | qtl |
| 724526 | Uae3 | Urinary albumin excretion QTL 3 | 4.9 | .0001 | Renal function | urine albumin level | 12 | 155313 | 10701201 | Rat | n/a | region | qtl |
| 737979 | Pia22 | Pristane induced arthritis QTL 22 | 53.1 | | Joint/bone inflammation | arthritis severity | 12 | 530865 | 45530865 | Rat | n/a | region | qtl |
| 631521 | Pia12 | Pristane induced arthritis QTL 12 | 8.9 | | Joint/bone inflammation | arthritis severity | 12 | 555108 | 24748499 | Rat | n/a | region | qtl |
| 61416 | Pia4 | Pristane induced arthritis QTL 4 | 8.4 | | Joint/bone inflammation | number of affected paws | 12 | 568621 | 45568621 | Rat | n/a | region | qtl |
| 634351 | Apr5 | Acute phase response QTL 5 | 6.7 | | IL-6 level | pristane induced | 12 | 568621 | 45568621 | Rat | n/a | region | qtl |
| 2302042 | Pia38 | Pristane induced arthritis QTL 38 | 3.5 | .001 | Joint/bone inflammation | pristane induced | 12 | 568621 | 45568621 | Rat | n/a | region | qtl |
| 2312418 | Kidm41 | Kidney mass QTL 41 | 3.7 | .0001 | Kidney mass | | 12 | 665384 | 20932760 | Rat | n/a | region | qtl |
| 634350 | Apr4 | Acute phase response QTL 4 | 6 | | Alpha1 acid glycoprotein level | pristane induced | 12 | 2248421 | 46782294 | Rat | n/a | region | qtl |
| 1300174 | Bw15 | Body weight QTL 15 | 2.93 | | Body weight | salt-loaded | 12 | 2957061 | 9628971 | Rat | n/a | region | qtl |
| 61421 | Cia12 | Collagen induced arthritis QTL 12 | 4.6 | | Joint/bone inflammation | type II collagen induced | 12 | 7148164 | 36894750 | Rat | n/a | region | qtl |
| 1581516 | Cm56 | Cardiac mass QTL 56 | 4.2 | .05 | Cardiac mass | left ventricle | 12 | 7382953 | 12240754 | Rat | n/a | region | qtl |
| 1600391 | Edcs2 | Endometrial carcinoma susceptibility QTL2 | 3.5 | .01 | Endometrial tumor susceptibility | | 12 | 7382953 | 27853771 | Rat | n/a | region | qtl |
| 1302792 | Scl21 | Serum cholesterol QTL 21 | 3.8 | .0011 | Lipid level | cholesterol | 12 | 7754826 | 25802539 | Rat | n/a | region | qtl |
