| 1000 | 1300636 | Gct2_m | granulosa cell tumorigenesis 2 (mouse) | | | Not determined | | 12 | 30214889 | 64215088 | Mouse | n/a | region | qtl |
| 1000 | 1301047 | Bglq9_m | body growth late QTL 9 (mouse) | | | Not determined | | 12 | 30214889 | 64215088 | Mouse | n/a | region | qtl |
| 1000 | 1301913 | Frp3_m | free running period 3 (mouse) | | | Not determined | | 12 | 29217345 | 63217465 | Mouse | n/a | region | qtl |
| 1000 | 1302172 | Skts5_m | skin tumor susceptibility 5 (mouse) | | | Not determined | | 12 | 22825454 | 56825604 | Mouse | n/a | region | qtl |
| 1000 | 4141645 | Ntta2_m | neurotensin transcript abundance 2 (mouse) | | | Not determined | | 12 | 22503869 | 56503980 | Mouse | n/a | region | qtl |
| 1000 | 1558978 | Cplaq10_m | circadian period of locomotor activity 10 (mouse) | | | Not determined | | 12 | 19628031 | 53628138 | Mouse | n/a | region | qtl |
| 1000 | 1300870 | Ath18_m | atherosclerosis 18 (mouse) | | | Not determined | | 12 | 18894639 | 52894740 | Mouse | n/a | region | qtl |
| 1000 | 1301428 | Etoms_m | etomidate sensitivity (mouse) | | | Not determined | | 12 | 18725677 | 52725810 | Mouse | n/a | region | qtl |
| 1000 | 1301694 | Rear2_m | rearing 2 (mouse) | | | Not determined | | 12 | 18725677 | 52725810 | Mouse | n/a | region | qtl |
| 1000 | 4142494 | Pmncq1_m | polymorphonuclear cell concentration QTL 1 (mouse) | | | Not determined | | 12 | 18474805 | 52474947 | Mouse | n/a | region | qtl |
| 1000 | 1301989 | Hdlq18_m | HDL QTL 18 (mouse) | | | Not determined | | 12 | 18474805 | 52474947 | Mouse | n/a | region | qtl |
| 1000 | 4142128 | Fl1sa_m | fatty liver 1 in SMXA (mouse) | | | Not determined | | 12 | 15390581 | 49390727 | Mouse | n/a | region | qtl |
| 1000 | 1558879 | Avptaq2_m | Avp transcript abundance QTL 2 (mouse) | | | Not determined | | 12 | 13858603 | 47858749 | Mouse | n/a | region | qtl |
| 1000 | 1301141 | Faq5_m | fluctuating asymmetry QTL 5 (mouse) | | | Not determined | | 12 | 10750456 | 44750601 | Mouse | n/a | region | qtl |
| 1000 | 1301723 | Fcsa7_m | femoral cross-sectional area 7 (mouse) | | | Not determined | | 12 | 10125870 | 44125978 | Mouse | n/a | region | qtl |
| 1000 | 1301037 | Cd4ts5_m | CD4 T cell subset 5 (mouse) | | | Not determined | | 12 | 8987310 | 42987447 | Mouse | n/a | region | qtl |
| 1000 | 1301446 | Elsgp4_m | elevated serum gp70 4 (mouse) | | | Not determined | | 12 | 8358024 | 42358167 | Mouse | n/a | region | qtl |
| 1000 | 1301163 | Eae16_m | susceptibility to experimental allergic encephalomyelitis 16 (mouse) | | | Not determined | | 12 | 8358024 | 42358167 | Mouse | n/a | region | qtl |
| 1000 | 1301574 | Lmblgq5_m | limb length QTL 5 (mouse) | | | Not determined | | 12 | 553252 | 34553422 | Mouse | n/a | region | qtl |
| 1000 | 4141660 | Nbwa1_m | NZB and NZW autoimmunity 1 (mouse) | | | Not determined | | 12 | 296939 | 34297107 | Mouse | n/a | region | qtl |
| 1000 | 1301207 | Circp1_m | circadian photosensitivity 1 (mouse) | | | Not determined | | 12 | 1 | 33387144 | Mouse | n/a | region | qtl |
| 1000 | 4142163 | Ascla5_m | atherosclerotic lesion area 5 (mouse) | | | Not determined | | 12 | 1 | 31353819 | Mouse | n/a | region | qtl |