| 1000 | 70202 | Alc19 | Alcohol consumption QTL 19 | 2.5 | | Consumption level | alcohol preference | 3 | 1 | 23762628 | Rat | n/a | region | qtl |
| 1000 | 631679 | Cm10 | Cardiac mass QTL 10 | 7.34 | .0001 | Cardiac mass | left ventricle | 3 | 1 | 26510302 | Rat | n/a | region | qtl |
| 1000 | 631545 | Bp85 | Blood pressure QTL 85 | 3.1 | | Blood pressure | systolic | 3 | 1 | 28873394 | Rat | n/a | region | qtl |
| 1000 | 61468 | Bp15 | Blood pressure QTL 15 | 4.4 | | Blood pressure | | 3 | 1 | 28873394 | Rat | n/a | region | qtl |
| 1000 | 631831 | Alc8 | Alcohol consumption QTL 8 | 2.7 | | Consumption level | alcohol preference | 3 | 1 | 29749474 | Rat | n/a | region | qtl |
| 1000 | 4889966 | Bss95 | Bone structure and strength QTL 95 | 4.4 | | Bone structure | | 3 | 1 | 33871290 | Rat | n/a | region | qtl |
| 1000 | 2312664 | Scl62 | Serum cholesterol level QTL 62 | | .05 | Lipid level | serum cholesterol | 3 | 1 | 35797756 | Rat | n/a | region | qtl |
| 1000 | 631568 | Bp92 | Blood pressure QTL 92 | 2.2 | .005 | Blood pressure | salt-loaded systolic | 3 | 1 | 38709732 | Rat | n/a | region | qtl |
| 1000 | 2290452 | Scl56 | Serum cholesterol level QTL 56 | 2.26 | | Lipid level | cholesterol level | 3 | 1 | 90573782 | Rat | n/a | region | qtl |
| 1000 | 1298526 | Arunc3 | Aerobic running capacity QTL 3 | 2.2 | | Aerobic running capacity | | 3 | 3577905 | 30254280 | Rat | n/a | region | qtl |
| 1000 | 70203 | Gcr2 | Gastric cancer resistance QTL 2 | 2.6 | | Gastric tumor resistance | tumor size | 3 | 4010230 | 23762628 | Rat | n/a | region | qtl |
| 1000 | 1358357 | Srcrtb1 | Stress Responsive Cort Basal QTL 1 | 6.36 | .002 | Hypothalamic-pituitary-adrenal axis | corticosterone | 3 | 4010230 | 23762628 | Rat | n/a | region | qtl |
| 1000 | 1558654 | Bw56 | Body weight QTL 56 | 4.5 | .0000171 | Body weight | | 3 | 6373335 | 26674263 | Rat | n/a | region | qtl |
| 1000 | 6893355 | Bw101 | Body weight QTL 101 | .4 | .38 | Body weight | | 3 | 6373335 | 26674263 | Rat | n/a | region | qtl |
| 1000 | 6893363 | Bw105 | Body weight QTL 105 | 2.6 | .0036 | Body weight | | 3 | 6373335 | 26674263 | Rat | n/a | region | qtl |
| 1000 | 70191 | BpQTLcluster4 | Blood pressure QTL cluster 4 | 2.575 | | Blood pressure | systolic | 3 | 6373335 | 47588420 | Rat | n/a | region | qtl |
| 1000 | 1358185 | Ept6 | Estrogen-induced pituitary tumorigenesis QTL 6 | 6.7 | | Gland mass | pituitary | 3 | 6373454 | 22341164 | Rat | n/a | region | qtl |
| 1000 | 2292615 | Ept17 | Estrogen-induced pituitary tumorigenesis QTL 17 | 6.7 | | Gland mass | pituitary | 3 | 6373454 | 22341164 | Rat | n/a | region | qtl |
| 1000 | 1558647 | Cm46 | Cardiac mass QTL 46 | 5.4 | .0000055 | Cardiac mass | body weight adjusted | 3 | 6373454 | 26674018 | Rat | n/a | region | qtl |
| 1000 | 1558650 | Cm48 | Cardiac mass QTL 48 | 4 | .0001 | Cardiac mass | body weight adjusted | 3 | 6373454 | 26674018 | Rat | n/a | region | qtl |
| 1000 | 1558657 | Cm43 | Cardiac mass QTL 43 | 6.6 | .0000000293 | Cardiac mass | body weight adjusted | 3 | 6373454 | 26674018 | Rat | n/a | region | qtl |
| 1000 | 1358905 | Hrtrt17 | Heart rate QTL 17 | 5.9 | .000014 | Heart rate | salt-loaded | 3 | 6662627 | 88648585 | Rat | n/a | region | qtl |
| 1000 | 1358885 | Bp251 | Blood pressure QTL 251 | 3.8 | | Blood pressure | mean arterial | 3 | 10267741 | 121619110 | Rat | n/a | region | qtl |
| 1000 | 1358888 | Bp264 | Blood pressure QTL 264 | 4.43 | | Blood pressure | mean arterial | 3 | 10267741 | 121619110 | Rat | n/a | region | qtl |
| 1000 | 2298542 | Neuinf11 | Neuroinflammation QTL 11 | .6 | | Neuroinflammation | | 3 | 10829503 | 75308165 | Rat | n/a | region | qtl |