| 1581557 | Eae16 | Experimental allergic encephalomyelitis QTL 16 | 3.8 | | Brain/spinal cord inflammation | demyelination | 8 | 8294860 | 115338082 | Rat | n/a | region | qtl |
| 61353 | Bp35 | Blood pressure QTL 35 | | | Blood pressure | | 8 | 9581132 | 103685771 | Rat | n/a | region | qtl |
| 731182 | Uae24 | Urinary albumin excretion QTL 24 | 6.4 | | Renal function | urine albumin level | 8 | 19815642 | 98451660 | Rat | n/a | region | qtl |
| 1358892 | Kidm26 | Kidney mass QTL 26 | 3.69 | | Kidney mass | | 8 | 28414004 | 103684785 | Rat | n/a | region | qtl |
| 1358896 | Bp262 | Blood pressure QTL 262 | 2.89 | | Blood pressure | post sympathetic nervous system block | 8 | 28414004 | 103684785 | Rat | n/a | region | qtl |
| 1358907 | Cm40 | Cardiac mass QTL 40 | 1.89 | | Cardiac mass | | 8 | 28414004 | 103684785 | Rat | n/a | region | qtl |
| 1331804 | Cm30 | Cardiac mass QTL 30 | 3.77443 | | Cardiac mass | | 8 | 29559446 | 103672447 | Rat | n/a | region | qtl |
| 1549908 | Neudeg1 | Neurodegradation QTL 1 | 5 | 0 | Neurodegradation | motoneuron cell number | 8 | 31508524 | 98947320 | Rat | n/a | region | qtl |
| 2313046 | Bss78 | Bone structure and strength QTL 78 | 3.5 | .0001 | Bone strength | | 8 | 32203394 | 86628010 | Rat | n/a | region | qtl |
| 2313057 | Bss76 | Bone structure and strength QTL 76 | 3 | .0001 | Bone structure | | 8 | 32203394 | 86628010 | Rat | n/a | region | qtl |
| 2313067 | Bss77 | Bone structure and strength QTL 77 | 3.1 | .0001 | Bone structure | | 8 | 32203394 | 86628010 | Rat | n/a | region | qtl |
| 2313088 | Bss75 | Bone structure and strength QTL 75 | 3.1 | .0001 | Bone structure | | 8 | 32203394 | 86628010 | Rat | n/a | region | qtl |
| 724540 | Uae8 | Urinary albumin excretion QTL 8 | 5 | | Renal function | urine abumin level | 8 | 32203394 | 98986263 | Rat | n/a | region | qtl |
| 1578755 | Pur5 | Proteinuria QTL 5 | 3.3 | .0001 | Renal function | urine protein level | 8 | 32203394 | 98986263 | Rat | n/a | region | qtl |
| 1578765 | Klgr1 | Kidney lesion grade QTL 1 | 3.3 | .0001 | Renal histology | kidney lesion grade | 8 | 32203499 | 98986085 | Rat | n/a | region | qtl |
| 1578769 | Uae31 | Urinary albumin excretion QTL 31 | 3.3 | .001 | Renal function | urine albumin level | 8 | 32203499 | 98986085 | Rat | n/a | region | qtl |
| 2316950 | Scl66 | Serum cholesterol level QTL 66 | 4.1 | | Lipid level | serum cholesterol | 8 | 32203499 | 110106272 | Rat | n/a | region | qtl |
| 1298065 | Scl16 | Serum cholesterol level QTL 16 | 3.8 | | Lipid level | cholesterol | 8 | 33897608 | 78897608 | Rat | n/a | region | qtl |
| 1582222 | Epfw2 | Epididymal fat weight QTL 2 | 3.2 | .0005 | Epididymal fat weight | | 8 | 34808657 | 79808657 | Rat | n/a | region | qtl |
| 1331838 | Niddm61 | Non-insulin dependent diabetes mellitus QTL 61 | 3.53 | .0004 | Insulin level | fasting | 8 | 38003289 | 103665018 | Rat | n/a | region | qtl |
| 61358 | Bp39 | Blood pressure QTL 39 | 2 | | Blood pressure | | 8 | 38902937 | 83902937 | Rat | n/a | region | qtl |
| 737824 | Hcar10 | Hepatocarcinoma resistance QTL 10 | 2.9 | | Liver tumor resistance | nodule number | 8 | 43313902 | 87122960 | Rat | n/a | region | qtl |
| 1358906 | Bp253 | Blood pressure QTL 253 | 4 | .0004 | Blood pressure | post sympathetic nervous system block | 8 | 43313902 | 98451660 | Rat | n/a | region | qtl |
| 1554321 | Bmd3 | Bone mineral density QTL 3 | 7.9 | .0001 | Bone mineral density | distal femur volumetric BMD by pQCT | 8 | 43561064 | 129041809 | Rat | n/a | region | qtl |
| 1331769 | Rf39 | Renal function QTL 39 | 3.871 | | Renal function | urine volume | 8 | 44484215 | 103672447 | Rat | n/a | region | qtl |
| 1298079 | Activ2 | Activity QTL 2 | 9.5 | .000001 | Activity level | novel environment | 8 | 44484215 | 129041809 | Rat | n/a | region | qtl |
| 70161 | Bp62 | Blood pressure QTL 62 | 2.9 | .001 | Blood pressure | salt-loaded systolic | 8 | 45291674 | 94514282 | Rat | n/a | region | qtl |
| 2313086 | Bss60 | Bone structure and strength QTL 60 | 4.1 | .0001 | Bone structure | | 8 | 53049279 | 86628010 | Rat | n/a | region | qtl |
| 4889938 | Bss89 | Bone structure and strength QTL 89 | 3.8 | | Bone structure | | 8 | 53049279 | 86628010 | Rat | n/a | region | qtl |
| 5684973 | Bss100 | Bone structure and strength QTL 100 | 4.7 | | Bone structure | tibial area | 8 | 53049279 | 86628010 | Rat | n/a | region | qtl |
| 2303570 | Gluco48 | Glucose level QTL 48 | 2 | | Glucose level | post-restraint | 8 | 53621297 | 98621297 | Rat | n/a | region | qtl |
| 1358912 | Bw51 | Body weight QTL 51 | 2.95 | | Body weight | | 8 | 54364071 | 112242906 | Rat | n/a | region | qtl |
| 2293697 | Bmd39 | Bone mineral density QTL 39 | | | Bone mineral density | | 8 | 57109012 | 103548876 | Rat | n/a | region | qtl |
| 1582243 | Bw66 | Body weight QTL 66 | 3.4 | .0048 | Body weight | | 8 | 57308572 | 89558994 | Rat | n/a | region | qtl |
| 1582254 | Kidm31 | Kidney mass QTL 31 | | | Kidney mass | | 8 | 57308572 | 89558994 | Rat | n/a | region | qtl |
| 631664 | Hcar3 | Hepatocarcinoma resistance QTL 3 | 2.9 | .0005 | Liver tumor resistance | nodule volume | 8 | 57308572 | 103684785 | Rat | n/a | region | qtl |
| 1300177 | Cm2 | Cardiac mass QTL 2 | 3.65 | | Cardiac mass | salt-loaded | 8 | 58135371 | 104697495 | Rat | n/a | region | qtl |
| 2301402 | Bp316 | Blood pressure QTL 316 | | .005 | Blood pressure | mean arterial | 8 | 58548876 | 103548876 | Rat | n/a | region | qtl |
| 631650 | Stl6 | Serum triglyceride level QTL 6 | 4 | .0019 | Lipid level | triglyceride | 8 | 64616911 | 116844692 | Rat | n/a | region | qtl |
| 2303171 | Bp331 | Blood pressure QTL 331 | 5.57 | .005 | Blood pressure | systolic | 8 | 64762472 | 124310219 | Rat | n/a | region | qtl |
| 631653 | Bp125 | Blood pressure QTL 125 | 3.3 | | Blood pressure | systolic | 8 | 70474667 | 115474667 | Rat | n/a | region | qtl |
| 631210 | Bw3 | Body weight QTL3 | 5.9 | | Body fat amount | mesenteric | 8 | 73102005 | 117434131 | Rat | n/a | region | qtl |
| 1300171 | Bp184 | Blood pressure QTL 184 | 3.66 | | Blood pressure | salt-loaded time series calculation | 8 | 74281610 | 123415406 | Rat | n/a | region | qtl |
| 1549909 | Stresp11 | Stress response QTL 11 | 6.83 | .0019 | Stress response | defensive burying - coping | 8 | 78008525 | 123008525 | Rat | n/a | region | qtl |
| 70197 | BpQTLcluster8 | Blood pressure QTL cluster 8 | 3.4 | | Blood pressure | systolic | 8 | 79313887 | 124313887 | Rat | n/a | region | qtl |
| 634332 | Pia18 | Pristane induced arthritis QTL 18 | 4 | | Joint/bone inflammation | arthritis severity | 8 | 79347688 | 87122814 | Rat | n/a | region | qtl |
| 2300181 | Bmd55 | Bone mineral density QTL 55 | 5.7 | .0001 | Bone mineral density | | 8 | 81048802 | 126048802 | Rat | n/a | region | qtl |
| 1331837 | Bw23 | Body weight QTL 23 | 4.19 | .00007 | Body weight | | 8 | 85328126 | 103665018 | Rat | n/a | region | qtl |
| 61437 | Cia6 | Collagen induced arthritis QTL 6 | | | Joint/bone inflammation | type II collagen induced | 8 | 86627869 | 127907359 | Rat | n/a | region | qtl |
| 6903300 | Scl33 | Serum cholesterol QTL 33 | 2 | .0125 | Lipid level | cholesterol level | 8 | 89742772 | 129041809 | Rat | n/a | region | qtl |
| 2313400 | Anxrr25 | Anxiety related response QTL 25 | | | Anxiety response | domestication | 8 | 93585899 | 118725315 | Rat | n/a | region | qtl |
| 738011 | Anxrr9 | Anxiety related response QTL 9 | 6.1 | | Anxiety response | open field inner locomotion | 8 | 98332663 | 129041809 | Rat | n/a | region | qtl |
| 1358893 | Bp263 | Blood pressure QTL 263 | 5.01 | | Blood pressure | post sympathetic nervous system block | 8 | 98451122 | 127956046 | Rat | n/a | region | qtl |
| 1358903 | Bp252 | Blood pressure QTL 252 | 7 | .0001 | Blood pressure | post sympathetic nervous system block | 8 | 98451122 | 127956046 | Rat | n/a | region | qtl |
| 724539 | Cm19 | Cardiac mass QTL 19 | 2.6 | | Cardiac mass | | 8 | 98986085 | 126316942 | Rat | n/a | region | qtl |
| 738014 | Anxrr15 | Anxiety related response QTL 15 | 3.6 | .005 | Anxiety response | plus maze-center | 8 | 100915338 | 129041809 | Rat | n/a | region | qtl |
| 2300182 | Bmd56 | Bone mineral density QTL 56 | 5.4 | | Bone mineral density | | 8 | 100915338 | 129041809 | Rat | n/a | region | qtl |
| 631217 | Activ1 | Activity QTL 1 | 15.9 | | Activity level | novel environment | 8 | 106733287 | 113364148 | Rat | n/a | region | qtl |
| 1599689 | Iddm24 | Insulin dependent diabetes mellitus QTL 24 | 4.72 | .001 | Glucose Level | insulin Dependent | 8 | 118705293 | 123876328 | Rat | n/a | region | qtl |
