| 2299160 | Iddm35 | Insulin dependent diabetes mellitus QTL 35 | 2.79 | | Glucose level | insulin-dependent | 18 | 4320091 | 76880933 | Rat | n/a | region | qtl |
| 1578661 | Bss20 | Bone structure and strength QTL 20 | 3.7 | | Bone structure | femoral neck total area | 18 | 12245097 | 86863412 | Rat | n/a | region | qtl |
| 1578667 | Bss21 | Bone structure and strength QTL 21 | 3.5 | | Bone structure | femoral neck cortical area | 18 | 12245097 | 86863412 | Rat | n/a | region | qtl |
| 1600373 | Mamtr6 | Mammary tumor resistance QTL 6 | | | Mammary tumor resistance | | 18 | 19892650 | 86863412 | Rat | n/a | region | qtl |
| 1331741 | Bp232 | Blood pressure QTL 232 | 3.59112 | | Blood pressure | diastolic | 18 | 22353754 | 86857890 | Rat | n/a | region | qtl |
| 61375 | Bp41 | Blood pressure QTL 41 | 2.4 | | Blood pressure | | 18 | 29344142 | 80277631 | Rat | n/a | region | qtl |
| 2293704 | Bss35 | Bone structure and strength QTL 35 | 4.59 | .0002 | Bone structure | | 18 | 31347802 | 76347802 | Rat | n/a | region | qtl |
| 2300157 | Bmd66 | Bone mineral density QTL 66 | 13.1 | .0001 | Bone mineral density | | 18 | 31347802 | 76347802 | Rat | n/a | region | qtl |
| 2300177 | Bmd65 | Bone mineral density QTL 65 | 19.7 | .0001 | Bone mineral density | | 18 | 31347802 | 76347802 | Rat | n/a | region | qtl |
| 738005 | Anxrr11 | Anxiety related response QTL 11 | 3.4 | | Anxiety response | open field inner locomotion | 18 | 32356601 | 77356601 | Rat | n/a | region | qtl |
| 61429 | Cia17 | Collagen induced arthritis QTL 17 | 4.6 | | Joint/bone inflammation | type II collagen induced | 18 | 32458819 | 73666623 | Rat | n/a | region | qtl |
| 2303120 | Mamtr8 | Mammary tumor resistance QTL 8 | | .001 | Mammary tumor resistance | | 18 | 32458819 | 86863412 | Rat | n/a | region | qtl |
| 631274 | Spl3 | Serum phospholipid level QTL 3 | 5.3 | | Protein level | | 18 | 32459145 | 80370367 | Rat | n/a | region | qtl |
| 631518 | Bw11 | Body weight QTL 11 | 2.8 | | Body weight | | 18 | 37135503 | 82135503 | Rat | n/a | region | qtl |
| 61367 | Iddm4 | Insulin dependent diabetes mellitus QTL 4 | 2.33 | .0074 | Glucose level | insulin-dependent | 18 | 41165704 | 86165704 | Rat | n/a | region | qtl |
| 1598826 | Anxrr20 | Anxiety related response QTL 20 | 3.04 | | Anxiety response | open field test- rearing | 18 | 44524337 | 87265094 | Rat | n/a | region | qtl |
| 6893683 | Bw110 | Body weight QTL 110 | 2.7 | .002 | Body weight | salt-loaded | 18 | 46513375 | 87265094 | Rat | n/a | region | qtl |
| 61360 | Eaey | Experimental allergic encephalomyelitis QTL y | 3 | | Brain/spinal cord inflammation | duration of disease | 18 | 49034213 | 87265094 | Rat | n/a | region | qtl |
| 2303571 | Bw92 | Body weight QTL 92 | 3 | | Body weight | | 18 | 51949129 | 87265094 | Rat | n/a | region | qtl |
| 2303584 | Gluco55 | Glucose level QTL 55 | 2 | | Glucose level | post-restraint | 18 | 51949129 | 87265094 | Rat | n/a | region | qtl |
| 738008 | Hcar14 | Hepatocarcinoma resistance QTL 14 | 4.3 | | Liver tumor resistance | nodule number | 18 | 53847682 | 86863412 | Rat | n/a | region | qtl |
| 1598832 | Glom11 | Glomerulus QTL 11 | 2.9 | | Renal pathology | glomerular injury score | 18 | 54435837 | 87265094 | Rat | n/a | region | qtl |
| 1359020 | Ppulsi2 | Prepulse inhibition QTL 2 | 2.71 | | Prepulse inhibition | | 18 | 54605732 | 77452533 | Rat | n/a | region | qtl |
| 2301417 | Bp319 | Blood pressure QTL 319 | | | Blood pressure | mean arterial | 18 | 54856551 | 79195912 | Rat | n/a | region | qtl |
| 1558649 | Bw58 | Body weight QTL 58 | 3.4 | .0005 | Body weight | | 18 | 57085070 | 87265094 | Rat | n/a | region | qtl |
| 6893359 | Bw103 | Body weight QTL 103 | 1.2 | .12 | Body weight | | 18 | 57085070 | 87265094 | Rat | n/a | region | qtl |
| 6893368 | Bw107 | Body weight QTL 107 | .3 | .5 | Body weight | | 18 | 57085070 | 87265094 | Rat | n/a | region | qtl |
| 1298072 | Cia26 | Collagen induced arthritis QTL 26 | 3.6 | | Joint/bone inflammation | arthritis severity | 18 | 57870442 | 87265094 | Rat | n/a | region | qtl |
| 2312600 | Bp341 | Blood pressure QTL 341 | | .05 | Blood pressure | | 18 | 62106066 | 73666623 | Rat | n/a | region | qtl |
| 6903359 | Bp355 | Blood pressure QTL 355 | 3.6 | | Blood pressure | salt-loaded | 18 | 62228896 | 80277631 | Rat | n/a | region | qtl |
| 6903353 | Bp353 | Blood pressure QTL 353 | 2.8 | | Blood pressure | salt-loaded | 18 | 62228896 | 87265094 | Rat | n/a | region | qtl |
| 70185 | BpQTLcluster15 | Blood pressure QTL cluster 15 | 3.64 | | Blood pressure | systolic | 18 | 62313296 | 79585008 | Rat | n/a | region | qtl |
| 2301969 | Bp324 | Blood pressure QTL 324 | 4.05 | | Blood pressure | systolic | 18 | 62313296 | 79585008 | Rat | n/a | region | qtl |
| 724542 | Kidm2 | Kidney mass QTL 2 | 2.6 | | Kidney mass | | 18 | 62739615 | 87265094 | Rat | n/a | region | qtl |
| 61384 | Bp48 | Blood pressure QTL 48 | 19.4 | | Blood pressure | | 18 | 63595606 | 80370517 | Rat | n/a | region | qtl |