| 1354584 | Despr6 | Despair related QTL 6 | | .0067 | Activity level | immobility level | 16 | 1 | 40096603 | Rat | n/a | region | qtl |
| 2303566 | Bw90 | Body weight QTL 90 | 2 | | Body weight | | 16 | 1 | 40096603 | Rat | n/a | region | qtl |
| 631561 | Hcuc2 | Hepatic copper content QTL 2 | 2.8 | | Copper level | hepatic | 16 | 1 | 40096622 | Rat | n/a | region | qtl |
| 6903319 | Bw114 | Body weight QTL 114 | 2.7 | .0037 | Body weight | | 16 | 172013 | 45172013 | Rat | n/a | region | qtl |
| 1600378 | Arunc4 | Aerobic running capacity QTL 4 | | .03 | Aerobic running capacity | best distance run to exhaustion | 16 | 350121 | 85734479 | Rat | n/a | region | qtl |
| 2293343 | Glom16 | Glomerulus QTL 16 | 9.1 | | Renal pathology | glomerulus inflammation | 16 | 819225 | 49333382 | Rat | n/a | region | qtl |
| 2312660 | Bw95 | Body weight QTL 95 | | .05 | Body weight | adiposity index | 16 | 819225 | 63306215 | Rat | n/a | region | qtl |
| 2312663 | Slep9 | Serum leptin concentration QTL 9 | | .001 | Hormone level | leptin | 16 | 819225 | 63306215 | Rat | n/a | region | qtl |
| 2312666 | Insul16 | Insulin level QTL 16 | | .01 | Insulin level | serum | 16 | 819225 | 63306215 | Rat | n/a | region | qtl |
| 2312669 | Stl23 | Serum triglyceride level QTL 23 | | .01 | Lipid level | triglyceride | 16 | 819225 | 63306215 | Rat | n/a | region | qtl |
| 1354625 | Despr7 | Despair related QTL 7 | | .016 | Activity level | immobility and climbing levels | 16 | 1632183 | 46632183 | Rat | n/a | region | qtl |
| 2306902 | Bp339 | Blood pressure QTL 339 | | .01 | Blood pressure | salt-loaded systolic | 16 | 3464719 | 46137590 | Rat | n/a | region | qtl |
| 70183 | BpQTLcluster13 | Blood pressure QTL cluster 13 | 3.325 | | Blood pressure | | 16 | 4304396 | 46137590 | Rat | n/a | region | qtl |
| 61338 | Bp23 | Blood pressure QTL 23 | 4.3 | | Blood pressure | salt-loaded systolic | 16 | 4304396 | 49304396 | Rat | n/a | region | qtl |
| 737819 | Hcas4 | Hepatocarcinoma susceptibility QTL 4 | 4.43 | | Liver tumor susceptibility | nodule number | 16 | 4304396 | 50266190 | Rat | n/a | region | qtl |
| 61405 | Niddm6 | Non-insulin dependent diabetes mellitus QTL 6 | 3.66 | .001 | Glucose level | | 16 | 4304396 | 52304351 | Rat | n/a | region | qtl |
| 737826 | Alc11 | Alcohol consumption QTL 11 | 3.2 | | Consumption level | alcohol preference | 16 | 4304396 | 64081533 | Rat | n/a | region | qtl |
| 70205 | Gcr3 | Gastric cancer resistance QTL 3 | 2.2 | | Gastric tumor resistance | tumor invasions depth | 16 | 18121291 | 70196694 | Rat | n/a | region | qtl |
| 70215 | Niddm29 | Non-insulin dependent diabetes mellitus QTL 29 | 3.54 | | Glucose level | postprandial | 16 | 19510772 | 80047126 | Rat | n/a | region | qtl |
| 2302057 | Pia29 | Pristane induced arthritis QTL 29 | 3.6 | .001 | Joint/bone inflammation | pristane induced | 16 | 24934312 | 69934312 | Rat | n/a | region | qtl |
| 6903294 | Stl30 | Serum triglyceride level QTL 30 | 2.6 | .0013 | Lipid level | triglyceride level | 16 | 28455247 | 73455247 | Rat | n/a | region | qtl |
| 1298529 | Arunc1 | Aerobic running capacity QTL 1 | 4 | | Aerobic running capacity | | 16 | 35339929 | 63977788 | Rat | n/a | region | qtl |