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| Relevance | RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | Annotations | Match | Type |
| 1000 | 61351 | Bp33 | Blood pressure QTL 33 | 0.0018 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 4 | 1 | 27716890 | Rat | n/a | region | qtl | |
| 1000 | 1641905 | Colcr1 | Colorectal carcinoma resistance QTL 1 | 4.3 | 0.0003 | intestine integrity trait (VT:0010554) | benign colorectal tumor surface area measurement (CMO:0001799) | 4 | 1 | 29494328 | Rat | n/a | region | qtl |
| 1000 | 61415 | Eae11 | Experimental allergic encephalomyelitis QTL 11 | 2.9 | nervous system integrity trait (VT:0010566) | post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422) | 4 | 1 | 39505420 | Rat | n/a | region | qtl | |
| 1000 | 61333 | Gluco16 | Glucose level QTL 16 | 4.3 | 0.00001 | adipocyte glucose uptake trait (VT:0004185) | absolute change in adipocyte glucose uptake (CMO:0000873) | 4 | 1 | 30372989 | Rat | n/a | region | qtl |
| 1000 | 1357343 | Gluco4 | Glucose level QTL 4 | 0.00002 | adipocyte glucose uptake trait (VT:0004185) | adipocyte maximal glucose uptake to basal glucose uptake ratio (CMO:0000874) | 4 | 1 | 33250345 | Rat | n/a | region | qtl | |
| 1000 | 1357341 | Gluco5 | Glucose level QTL 5 | 6.4 | adipocyte free fatty acid secretion trait (VT:0010465) | absolute change in adipocyte free fatty acid secretion per unit volume (CMO:0001446) | 4 | 1 | 33250345 | Rat | n/a | region | qtl | |
| 1000 | 738021 | Hcar13 | Hepatocarcinoma resistance QTL 13 | 4.3 | liver integrity trait (VT:0010547) | liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464) | 4 | 1 | 32584199 | Rat | n/a | region | qtl | |
| 1000 | 8552903 | Pigfal2 | Plasma insulin-like growth factor 1 level QTL 2 | 7.3 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 4 | 1 | 31934116 | Rat | n/a | region | qtl | |
| 1000 | 724557 | Plsm1 | Polydactyly-luxate syndrome (PLS) morphotypes QTL 1 | 0.0003 | forelimb integrity trait (VT:0010562) | front foot phalanges count (CMO:0001947) | 4 | 1 | 27716890 | Rat | n/a | region | qtl | |
| 1000 | 9589046 | Scfw2 | Subcutaneous fat weight QTL 2 | 5.54 | 0.001 | subcutaneous adipose mass (VT:1000472) | abdominal subcutaneous fat pad weight (CMO:0002069) | 4 | 1 | 31934116 | Rat | n/a | region | qtl |
| 1000 | 61408 | Scl23 | Serum cholesterol level QTL 23 | 0.0005 | blood HDL phospholipid amount (VT:0010504) | serum high density lipoprotein phospholipid level (CMO:0001567) | 4 | 1 | 27716890 | Rat | n/a | region | qtl | |
| 1000 | 9590100 | Sffal4 | Serum free fatty acids level QTL 4 | 7.36 | 0.05 | blood free fatty acid amount (VT:0001553) | plasma free fatty acids level (CMO:0000546) | 4 | 1 | 31934116 | Rat | n/a | region | qtl |
| 1000 | 9589097 | Slep11 | Serum leptin concentration QTL 11 | 5.09 | 0.001 | blood leptin amount (VT:0005667) | plasma leptin level (CMO:0000781) | 4 | 1 | 31934116 | Rat | n/a | region | qtl |
| 1000 | 634323 | Hc2 | Hypercalciuria QTL 2 | 2.15 | urine calcium amount (VT:0002985) | urine calcium excretion rate (CMO:0000763) | 4 | 210796 | 45210796 | Rat | n/a | region | qtl | |
| 1000 | 2303168 | Bp330 | Blood pressure QTL 330 | 4.25 | 0.017 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 4 | 5214602 | 146446691 | Rat | n/a | region | qtl |
| 1000 | 619616 | Bp79 | Blood pressure QTL 79 | 0.0292 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 4 | 5214602 | 78882945 | Rat | n/a | region | qtl | |
| 1000 | 1358203 | Stl19 | Serum triglyceride level QTL 19 | 2.8 | 0.002 | blood triglyceride amount (VT:0002644) | serum triglyceride level (CMO:0000360) | 4 | 5218294 | 65958103 | Rat | n/a | region | qtl |
| 1000 | 2302371 | Stl22 | Serum triglyceride level QTL 22 | 5.15 | blood triglyceride amount (VT:0002644) | serum triglyceride level (CMO:0000360) | 4 | 5218294 | 57114705 | Rat | n/a | region | qtl | |
| 1000 | 1358201 | Gluco12 | Glucose level QTL12 | 1.6 | adipocyte glucose uptake trait (VT:0004185) | adipocyte maximal glucose uptake (CMO:0000870) | 4 | 5218392 | 29593287 | Rat | n/a | region | qtl | |
| 1000 | 631642 | Stl2 | Serum triglyceride level QTL 2 | 3.3 | blood triglyceride amount (VT:0002644) | serum triglyceride level (CMO:0000360) | 4 | 5219178 | 56647776 | Rat | n/a | region | qtl | |
| 1000 | 631209 | Bw2 | Body weight QTL2 | 4.2 | retroperitoneal fat pad mass (VT:0010430) | retroperitoneal fat pad weight to body weight ratio (CMO:0000635) | 4 | 9940885 | 44463908 | Rat | n/a | region | qtl | |
| 1000 | 1300141 | Bp178 | Blood pressure QTL 178 | arterial blood pressure trait (VT:2000000) | mean arterial blood pressure (CMO:0000009) | 4 | 10024901 | 39524530 | Rat | n/a | region | qtl | ||
| 1000 | 6478724 | Anxrr35 | Anxiety related response QTL 35 | 0.00449 | defecation behavior trait (VT:0010462) | defecation measurement (CMO:0000997) | 4 | 10084089 | 55084089 | Rat | n/a | region | qtl | |
| 1000 | 6478766 | Anxrr47 | Anxiety related response QTL 47 | 0.09637 | locomotor behavior trait (VT:0001392) | number of entries into a discrete space in an experimental apparatus (CMO:0000960) | 4 | 10084089 | 55084089 | Rat | n/a | region | qtl | |
| 1000 | 6478769 | Anxrr48 | Anxiety related response QTL 48 | 0.02514 | locomotor behavior trait (VT:0001392) | amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958) | 4 | 10084089 | 55084089 | Rat | n/a | region | qtl | |
| 1000 | 8694374 | Bw155 | Body weight QTL 155 | 3.39 | 0.001 | body lean mass (VT:0010483) | lean tissue morphological measurement (CMO:0002184) | 4 | 10084089 | 55084089 | Rat | n/a | region | qtl |
| 1000 | 8552906 | Pigfal3 | Plasma insulin-like growth factor 1 level QTL 3 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 4 | 10084089 | 55084089 | Rat | n/a | region | qtl | ||
| 1000 | 9590304 | Scort17 | Serum corticosterone level QTL 17 | 4.96 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 4 | 10084089 | 55084089 | Rat | n/a | region | qtl |
| 1000 | 631261 | Tcas3 | Tongue tumor susceptibility QTL 3 | 6.88 | tongue integrity trait (VT:0010553) | number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) | 4 | 10814170 | 91360527 | Rat | n/a | region | qtl | |
| 1000 | 2316958 | Gluco58 | Glucose level QTL 58 | 10 | blood glucose amount (VT:0000188) | blood glucose level (CMO:0000046) | 4 | 11320076 | 180699135 | Rat | n/a | region | qtl | |
| 1000 | 2303585 | Bw86 | Body weight QTL 86 | 4 | body mass (VT:0001259) | body weight (CMO:0000012) | 4 | 14678065 | 59678065 | Rat | n/a | region | qtl | |
| 1000 | 2313401 | Anxrr27 | Anxiety related response QTL 27 | aggression-related behavior trait (VT:0015014) | tameness/aggressiveness composite score (CMO:0002136) | 4 | 17933508 | 62933508 | Rat | n/a | region | qtl | ||
| 1000 | 70222 | Eae2 | Experimental allergic encephalomyelitis QTL 2 | 4.3 | nervous system integrity trait (VT:0010566) | experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046) | 4 | 21333343 | 39505420 | Rat | n/a | region | qtl | |
| 1000 | 61412 | Pia2 | Pristane induced arthritis QTL 2 | 3.9 | joint integrity trait (VT:0010548) | post-insult time to onset of experimental arthritis (CMO:0001450) | 4 | 21333343 | 62278020 | Rat | n/a | region | qtl | |
| 1000 | 1354665 | Stl10 | Serum triglyceride level QTL 10 | 3.57 | blood triglyceride amount (VT:0002644) | serum triglyceride level (CMO:0000360) | 4 | 21333343 | 44463908 | Rat | n/a | region | qtl | |
| 1000 | 8552803 | Bw144 | Body weight QTL 144 | 16 | body mass (VT:0001259) | change in body weight to body weight ratio (CMO:0002216) | 4 | 22710685 | 34430484 | Rat | n/a | region | qtl | |
| 1000 | 7411547 | Bw129 | Body weight QTL 129 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 6 | 5564495 | 46669029 | Rat | n/a | region | qtl | |
| 1000 | 634351 | Apr5 | Acute phase response QTL 5 | 6.7 | blood interleukin-6 amount (VT:0008595) | plasma interleukin-6 level (CMO:0001927) | 12 | 1 | 44503507 | Rat | n/a | region | qtl | |
| 1000 | 1598855 | Bp294 | Blood pressure QTL 294 | 3.5 | arterial blood pressure trait (VT:2000000) | systolic blood pressure (CMO:0000004) | 12 | 1 | 34851688 | Rat | n/a | region | qtl | |
| 1000 | 6893681 | Bw109 | Body weight QTL 109 | 2.3 | 0.004 | body mass (VT:0001259) | body weight (CMO:0000012) | 12 | 1 | 23297788 | Rat | n/a | region | qtl |
| 1000 | 7411545 | Bw128 | Body weight QTL 128 | 5.2 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 12 | 1 | 42110980 | Rat | n/a | region | qtl |
| 1000 | 1300174 | Bw15 | Body weight QTL 15 | 2.93 | body mass (VT:0001259) | body weight loss (CMO:0001399) | 12 | 1 | 9318387 | Rat | n/a | region | qtl | |
| 1000 | 8694179 | Bw150 | Body weight QTL 150 | 2.9 | 0.001 | body mass (VT:0001259) | body weight gain (CMO:0000420) | 12 | 1 | 42110980 | Rat | n/a | region | qtl |
| 1000 | 1581516 | Cm56 | Cardiac mass QTL 56 | 4.2 | 0.05 | heart left ventricle mass (VT:0007031) | heart left ventricle weight to body weight ratio (CMO:0000530) | 12 | 1 | 29333307 | Rat | n/a | region | qtl |
| 1000 | 10755457 | Coatc14 | Coat color QTL 14 | 0.01759 | coat/hair pigmentation trait (VT:0010463) | pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812) | 12 | 1 | 22591684 | Rat | n/a | region | qtl | |
| 1000 | 7411660 | Foco28 | Food consumption QTL 28 | 10.9 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 12 | 1 | 42110980 | Rat | n/a | region | qtl |
| 1000 | 7411586 | Foco5 | Food consumption QTL 5 | 5.4 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 12 | 1 | 42110980 | Rat | n/a | region | qtl |
| 1000 | 7411595 | Foco9 | Food consumption QTL 9 | 4 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 12 | 1 | 42110980 | Rat | n/a | region | qtl |
| 1000 | 9590086 | Insglur6 | Insulin/glucose ratio QTL 6 | 18.97 | 0.001 | blood insulin amount (VT:0001560) | calculated plasma insulin level (CMO:0002170) | 12 | 1 | 42110980 | Rat | n/a | region | qtl |
| 1000 | 2303575 | Insul14 | Insulin level QTL 14 | 4 | blood insulin amount (VT:0001560) | blood insulin level (CMO:0000349) | 12 | 1 | 42450532 | Rat | n/a | region | qtl | |
| 1000 | 2312418 | Kidm41 | Kidney mass QTL 41 | 3.7 | 0.0001 | kidney mass (VT:0002707) | single kidney wet weight to body weight ratio (CMO:0000622) | 12 | 1 | 19611090 | Rat | n/a | region | qtl |
| 1000 | 737979 | Pia22 | Pristane induced arthritis QTL 22 | 53.1 | joint integrity trait (VT:0010548) | joint inflammation composite score (CMO:0000919) | 12 | 1 | 44465750 | Rat | n/a | region | qtl | |
| 1000 | 2302042 | Pia38 | Pristane induced arthritis QTL 38 | 3.5 | 0.001 | blood immunoglobulin amount (VT:0002460) | serum immunoglobulin G1 level (CMO:0002115) | 12 | 1 | 44503507 | Rat | n/a | region | qtl |
| 1000 | 9590147 | Scort7 | Serum corticosterone level QTL 7 | 13.61 | 0.001 | blood corticosterone amount (VT:0005345) | plasma corticosterone level (CMO:0001173) | 12 | 1 | 42110980 | Rat | n/a | region | qtl |
| 1000 | 7243862 | Mcs30 | Mammary carcinoma susceptibility QTL 30 | 8.62 | mammary gland integrity trait (VT:0010552) | mammary tumor number (CMO:0000343) | 12 | 797729 | 8525593 | Rat | n/a | region | qtl | |
| 1000 | 634350 | Apr4 | Acute phase response QTL 4 | 6 | orosomucoid 1 amount (VT:0010541) | plasma orosomucoid 1 level (CMO:0001467) | 12 | 1172005 | 46172005 | Rat | n/a | region | qtl | |
| 1000 | 724526 | Uae3 | Urinary albumin excretion QTL 3 | 4.9 | 0.0001 | urine albumin amount (VT:0002871) | urine albumin excretion rate (CMO:0000757) | 12 | 3906969 | 10373166 | Rat | n/a | region | qtl |
| 1000 | 7411597 | Foco10 | Food consumption QTL 10 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 12 | 5564495 | 46669029 | Rat | n/a | region | qtl | |
| 1000 | 7411641 | Foco19 | Food consumption QTL 19 | 27.7 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 12 | 5564495 | 46669029 | Rat | n/a | region | qtl |
| 1000 | 7411588 | Foco6 | Food consumption QTL 6 | 0.001 | eating behavior trait (VT:0001431) | feed conversion ratio (CMO:0001312) | 12 | 5564495 | 46669029 | Rat | n/a | region | qtl | |
| 1000 | 8552964 | Pigfal17 | Plasma insulin-like growth factor 1 level QTL 17 | 3.5 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 12 | 5564495 | 46669029 | Rat | n/a | region | qtl | |
| 1000 | 8552918 | Pigfal7 | Plasma insulin-like growth factor 1 level QTL 7 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 12 | 5564495 | 46669029 | Rat | n/a | region | qtl | ||
| 1000 | 8552912 | Pigfal6 | Plasma insulin-like growth factor 1 level QTL 6 | 5 | blood insulin-like growth factor amount (VT:0010479) | plasma insulin-like growth factor 1 level (CMO:0001299) | 12 | 5564498 | 46669029 | Rat | n/a | region | qtl | |
| 1000 | 10059594 | Kidm46 | Kidney mass QTL 46 | 3.79 | 0.025 | kidney mass (VT:0002707) | both kidneys wet weight to body weight ratio (CMO:0000340) | 12 | 6107579 | 46669029 | Rat | n/a | region | qtl |
| 1000 | 1600391 | Edcs2 | Endometrial carcinoma susceptibility QTL2 | 3.5 | 0.01 | uterus morphology trait (VT:0001120) | percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759) | 12 | 6833190 | 17870186 | Rat | n/a | region | qtl |
| 1000 | 1302792 | Scl21 | Serum cholesterol level QTL 21 | 3.8 | 0.0011 | blood cholesterol amount (VT:0000180) | plasma total cholesterol level (CMO:0000585) | 12 | 7196730 | 46669029 | Rat | n/a | region | qtl |
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