| 1000 | 1598843 | Cm63 | Cardiac mass QTL 63 | 2.6 | | Cardiac mass | | 6 | 1 | 23802078 | Rat | n/a | region | qtl |
| 1000 | 1578758 | Tcas9 | Tongue tumor susceptibility QTL 9 | 3.29 | | Tongue tumor susceptibility | tongue tumor number | 6 | 1 | 25291384 | Rat | n/a | region | qtl |
| 1000 | 1331743 | Uae28 | Urinary albumin excretion QTL 28 | 4.5 | | Renal function | urine albumin level | 6 | 1 | 28765971 | Rat | n/a | region | qtl |
| 1000 | 738023 | Alc17 | Alcohol consumption QTL 17 | 3.1 | .003 | Consumption level | alcohol preference | 6 | 1 | 35786687 | Rat | n/a | region | qtl |
| 1000 | 1549905 | Stresp10 | Stress response QTL 10 | 6.83 | .0066 | Stress response | defensive burying - approach | 6 | 1 | 35786687 | Rat | n/a | region | qtl |
| 1000 | 1354616 | Despr12 | Despair related QTL 12 | | .0012 | Activity level | climbing level | 6 | 1 | 35786687 | Rat | n/a | region | qtl |
| 1000 | 2300176 | Bmd51 | Bone mineral density QTL 51 | 11.7 | .0001 | Bone mineral density | | 6 | 1 | 35786687 | Rat | n/a | region | qtl |
| 1000 | 2300190 | Bmd52 | Bone mineral density QTL 52 | 11.2 | .0001 | Bone mineral density | | 6 | 1 | 35786687 | Rat | n/a | region | qtl |
| 1000 | 2293709 | Bss23 | Bone structure and strength QTL 23 | 5.18 | .0001 | Bone structure | | 6 | 1 | 42401411 | Rat | n/a | region | qtl |
| 1000 | 2293650 | Bss31 | Bone structure and strength QTL 31 | 5.05 | .0001 | Bone structure | | 6 | 1 | 42401411 | Rat | n/a | region | qtl |
| 1000 | 2293656 | Bss28 | Bone structure and strength QTL 28 | 6.79 | .0001 | Bone structure | | 6 | 1 | 42401411 | Rat | n/a | region | qtl |
| 1000 | 738024 | Sach5 | Saccharine consumption QTL 5 | 3.9 | .00039 | Consumption level | saccharin preference | 6 | 1 | 43326782 | Rat | n/a | region | qtl |
| 1000 | 1359023 | Bp272 | Blood pressure QTL 272 | 2.5 | | Blood pressure | mean arterial pressure, stress related changes | 6 | 1301952 | 27253998 | Rat | n/a | region | qtl |
| 1000 | 2292589 | Emca10 | Estrogen-induced mammary cancer QTL 10 | | .048 | Mammary tumor resistance | | 6 | 1301952 | 46301952 | Rat | n/a | region | qtl |
| 1000 | 1354664 | Slep2 | Serum leptin concentration QTL 2 | 4.49 | | Hormone level | leptin | 6 | 1301952 | 74436995 | Rat | n/a | region | qtl |
| 1000 | 1576309 | Emca7 | Estrogen-induced mammary cancer QTL 7 | 4 | | Mammary tumor susceptibility | estradiol-induced | 6 | 2802670 | 111967837 | Rat | n/a | region | qtl |
| 1000 | 70196 | BpQTLcluster7 | Blood pressure QTL cluster 7 | 6.82 | | Blood pressure | intra-arterial | 6 | 3158498 | 75049527 | Rat | n/a | region | qtl |
| 1000 | 1578665 | Bss16 | Bone structure and strength QTL 16 | 4.4 | | Bone structure | femoral neck trabecular area | 6 | 6265856 | 75462111 | Rat | n/a | region | qtl |
| 1000 | 1578668 | Bmd14 | Bone mineral density QTL 14 | 3.8 | | Bone mineral density | femoral neck total vBMD | 6 | 6265856 | 75462111 | Rat | n/a | region | qtl |
| 1000 | 4145119 | Mcs25 | Mammary carcinoma susceptibility QTL 25 | | .0001 | Mammary tumor susceptibility | | 6 | 7161389 | 115238799 | Rat | n/a | region | qtl |
| 1000 | 2301972 | Bp325 | Blood pressure QTL 325 | 4.8 | | Blood pressure | | 6 | 7680593 | 75049644 | Rat | n/a | region | qtl |
| 1000 | 2293706 | Bmd20 | Bone mineral density QTL 20 | 4.3 | .0002 | Bone mineral density | | 6 | 13286615 | 19901481 | Rat | n/a | region | qtl |
| 1000 | 1300128 | Rf16 | Renal function QTL 16 | 3.89 | | Renal function | salt-loaded renal blood flow | 6 | 13286615 | 35233017 | Rat | n/a | region | qtl |
| 1000 | 1300164 | Rf15 | Renal function QTL 15 | | | Renal function | salt-loaded renal blood flow | 6 | 13286615 | 56714969 | Rat | n/a | region | qtl |
| 1000 | 2293839 | Kiddil2 | Kidney dilation QTL 2 | 4.8 | | Renal pathology | kidney dilation | 6 | 20798926 | 84287337 | Rat | n/a | region | qtl |
| 1000 | 2293841 | Kiddil4 | Kidney dilation QTL 4 | 4.4 | | Renal pathology | kidney dilation | 6 | 20798926 | 84287337 | Rat | n/a | region | qtl |
| 1000 | 1331779 | Rf38 | Renal function QTL 38 | 2.876 | | Renal function | renal vascular resistance | 6 | 32764436 | 75049644 | Rat | n/a | region | qtl |
| 1000 | 1641898 | Colcr4 | Colorectal carcinoma resistance QTL4 | 3.71 | .0007 | Colorectal carcinoma resistance | | 6 | 33021033 | 64955579 | Rat | n/a | region | qtl |
| 1000 | 634318 | Bw118 | Body weight QTL 118 | 3.55 | | Body fat amount | abdominal fat | 6 | 34039461 | 59946628 | Rat | n/a | region | qtl |
| 1000 | 6893340 | Cm77 | Cardiac mass QTL 77 | .26 | .57 | Cardiac mass | body weight adjusted | 6 | 34039461 | 84287190 | Rat | n/a | region | qtl |
| 1000 | 1300143 | Rf14 | Renal function QTL 14 | 2.92 | | Renal function | salt-loaded renal blood flow | 6 | 35232849 | 80102311 | Rat | n/a | region | qtl |
| 1000 | 1354632 | Scl29 | Serum cholesterol level QTL 29 | 3.74 | | Lipid level | cholesterol | 6 | 35883625 | 74436995 | Rat | n/a | region | qtl |
| 1000 | 70199 | Coreg1 | Compensatory renal growth QTL 1 | 11.8 | | Renal function | compensatory growth | 6 | 36481546 | 59946874 | Rat | n/a | region | qtl |
| 1000 | 634307 | Bp141 | Blood pressure QTL 141 | 4 | | Blood pressure | systolic | 6 | 37446751 | 82446751 | Rat | n/a | region | qtl |
| 1000 | 737827 | Hcar11 | Hepatocarcinoma resistance QTL 11 | 4.4 | | Liver tumor resistance | nodule number | 6 | 41300997 | 115238799 | Rat | n/a | region | qtl |
| 1000 | 634330 | Pia16 | Pristane induced arthritis QTL 16 | 3.9 | | Joint/bone inflammation | arthritis severity | 6 | 47039212 | 108621490 | Rat | n/a | region | qtl |