| 1000 | 1301166 | Thypr2_m | thymocyte proliferative response 2 (mouse) | | | Not determined | | 1 | 41290809 | 75290956 | Mouse | n/a | region | qtl |
| 1000 | 1301714 | Vertcling_m | vertical clinging (mouse) | | | Not determined | | 1 | 42955716 | 76955852 | Mouse | n/a | region | qtl |
| 1000 | 1301670 | Ssta1_m | susceptibility to Salmonella typhimurium antigens 1 (mouse) | | | Not determined | | 1 | 45954170 | 79954297 | Mouse | n/a | region | qtl |
| 1000 | 1301225 | Sle7_m | systematic lupus erythematosus susceptibility 7 (mouse) | | | Not determined | | 1 | 46862105 | 80862254 | Mouse | n/a | region | qtl |
| 1000 | 1301616 | Yaa2_m | Y-linked autoimmune acceleration 2 (mouse) | | | Not determined | | 1 | 46862105 | 80862254 | Mouse | n/a | region | qtl |
| 1000 | 1558905 | Gct7_m | granulosa cell tumorigenesis 7 (mouse) | | | Not determined | | 1 | 47357309 | 81357428 | Mouse | n/a | region | qtl |
| 1000 | 1301629 | Obq7_m | obesity QTL 7 (mouse) | | | Not determined | | 1 | 48896421 | 82896625 | Mouse | n/a | region | qtl |
| 1000 | 1301953 | Tmevd9_m | Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 9 (mouse) | | | Not determined | | 1 | 48896421 | 82896625 | Mouse | n/a | region | qtl |
| 1000 | 1301211 | Bbaa11_m | B.burgdorferi-associated arthritis 11 (mouse) | | | Not determined | | 1 | 48896421 | 82896625 | Mouse | n/a | region | qtl |
| 1000 | 1301430 | Cdcs2_m | cytokine deficiency colitis susceptibility 2 (mouse) | | | Not determined | | 1 | 48899760 | 82899900 | Mouse | n/a | region | qtl |
| 1000 | 1300894 | Capop_m | cyclophosphamide induced apoptosis (mouse) | | | Not determined | | 1 | 49992757 | 83992999 | Mouse | n/a | region | qtl |
| 1000 | 1357741 | Nidd5k_m | Nidd5 on KK-A<y> (mouse) | | | Not determined | | 1 | 55982363 | 89982472 | Mouse | n/a | region | qtl |
| 1000 | 4142467 | Wbcq1_m | white blood cell quantitative locus 1 (mouse) | | | Not determined | | 1 | 56273629 | 90273775 | Mouse | n/a | region | qtl |
| 1000 | 1558931 | Scpro4_m | Stem cell proliferation 4 (mouse) | | | Not determined | | 1 | 56273629 | 90273775 | Mouse | n/a | region | qtl |
| 1000 | 1357505 | Vtbt1_m | vertebral trabecular bone trait 1 (mouse) | | | Not determined | | 1 | 56273629 | 90273775 | Mouse | n/a | region | qtl |
| 1000 | 1357817 | Dmyaq2_m | darker modification of yellow agouti QTL 2 (mouse) | | | Not determined | | 1 | 56734337 | 90734492 | Mouse | n/a | region | qtl |
| 1000 | 1301933 | Insq6_m | insulin QTL 6 (mouse) | | | Not determined | | 1 | 56734337 | 90734492 | Mouse | n/a | region | qtl |
| 1000 | 1357679 | Egrm1_m | early growth rate, maternal effect 1 (mouse) | | | Not determined | | 1 | 57999392 | 91999495 | Mouse | n/a | region | qtl |
| 1000 | 1301162 | Skull1_m | skull morphology 1 (mouse) | | | Not determined | | 1 | 57999392 | 91999495 | Mouse | n/a | region | qtl |
| 1000 | 1357874 | Manln1_m | mandible length 1 (mouse) | | | Not determined | | 1 | 57999392 | 91999495 | Mouse | n/a | region | qtl |
| 1000 | 1301870 | Bglq1_m | body growth late QTL 1 (mouse) | | | Not determined | | 1 | 57999392 | 91999495 | Mouse | n/a | region | qtl |
| 1000 | 1300746 | Skl1_m | skeletal size (tail length) 1 (mouse) | | | Not determined | | 1 | 57999392 | 91999495 | Mouse | n/a | region | qtl |
| 1000 | 1301667 | Lxw5_m | lupus BXSB x NZW 5 (mouse) | | | Not determined | | 1 | 58569122 | 92569374 | Mouse | n/a | region | qtl |
| 1000 | 1301444 | Alcw5_m | alcohol withdrawal 5 (mouse) | | | Not determined | | 1 | 58569122 | 92569374 | Mouse | n/a | region | qtl |
| 1000 | 4141736 | Brml8_m | bone response to mechanical loading 8 (mouse) | | | Not determined | | 1 | 61202934 | 95203082 | Mouse | n/a | region | qtl |
| 1000 | 1301463 | Szs5_m | seizure susceptibility 5 (mouse) | | | Not determined | | 1 | 63264451 | 97264594 | Mouse | n/a | region | qtl |
| 1000 | 1301754 | Cocia5_m | cocaine induced activation 5 (mouse) | | | Not determined | | 1 | 71315827 | 105315981 | Mouse | n/a | region | qtl |
| 1000 | 1302029 | Sst1_m | susceptibility to tuberculosis 1 (mouse) | | | Not determined | | 1 | 72099549 | 106099675 | Mouse | n/a | region | qtl |