| 1000 | 1558963 | Sphsr2_m | spermatocyte heat stress resistance 2 (mouse) | | | Not determined | | 11 | 50000867 | 84001087 | Mouse | n/a | region | qtl |
| 1000 | 1301830 | Ssta4_m | susceptibility to Salmonella typhimurium antigens 4 (mouse) | | | Not determined | | 11 | 50000867 | 84001087 | Mouse | n/a | region | qtl |
| 1000 | 4141825 | Hdlq37_m | HDL QTL 37 (mouse) | | | Not determined | | 11 | 51422759 | 85423006 | Mouse | n/a | region | qtl |
| 1000 | 1357827 | Hdl39_m | HDL level 39 (mouse) | | | Not determined | | 11 | 51422759 | 85423006 | Mouse | n/a | region | qtl |
| 1000 | 1357794 | Cinda1_m | cytokine induced activation 1 (mouse) | | | Not determined | | 11 | 51422759 | 85423006 | Mouse | n/a | region | qtl |
| 1000 | 1301842 | Gvhd4_m | graft-versus host disease 4 (mouse) | | | Not determined | | 11 | 52101109 | 86101222 | Mouse | n/a | region | qtl |
| 1000 | 4141085 | Rbcq3_m | red blood cell QTL 3 (mouse) | | | Not determined | | 11 | 52607486 | 86607663 | Mouse | n/a | region | qtl |
| 1000 | 1300744 | Tshp10_m | tooth shape 10 (mouse) | | | Not determined | | 11 | 52761978 | 86762125 | Mouse | n/a | region | qtl |
| 1000 | 1301906 | Bgeq9_m | body growth early QTL 9 (mouse) | | | Not determined | | 11 | 52761978 | 86762125 | Mouse | n/a | region | qtl |
| 1000 | 1302108 | Skl5_m | skeletal size (tail length) 5 (mouse) | | | Not determined | | 11 | 52761978 | 86762125 | Mouse | n/a | region | qtl |
| 1000 | 1301238 | Pas5_m | pulmonary adenoma susceptibility 5 (mouse) | | | Not determined | | 11 | 52761978 | 86762125 | Mouse | n/a | region | qtl |
| 1000 | 1300774 | Pgia7_m | proteoglycan induced arthritis 7 (mouse) | | | Not determined | | 11 | 53313264 | 87313413 | Mouse | n/a | region | qtl |
| 1000 | 1558896 | Motp1_m | modifier of Trp53 1 (mouse) | | | Not determined | | 11 | 53313264 | 87313413 | Mouse | n/a | region | qtl |
| 1000 | 4141612 | Cia40_m | collagen induced arthritis 40 (mouse) | | | Not determined | | 11 | 53988346 | 117993212 | Mouse | n/a | region | qtl |
| 1000 | 4141830 | Pregq1_m | pregnancy QTL 1 (mouse) | | | Not determined | | 11 | 54049428 | 83656328 | Mouse | n/a | region | qtl |
| 1000 | 4142121 | Tmc1m2_m | Tmc1 modifier 2 (mouse) | | | Not determined | | 11 | 56786703 | 114128445 | Mouse | n/a | region | qtl |
| 1000 | 1301548 | Idd4_m | insulin dependent diabetes susceptibility 4 (mouse) | | | Not determined | | 11 | 57677336 | 91677434 | Mouse | n/a | region | qtl |
| 1000 | 1301182 | Vmbic6_m | ventral midbrain iron content 6 (mouse) | | | Not determined | | 11 | 59777286 | 93777433 | Mouse | n/a | region | qtl |
| 1000 | 4142202 | Feml4_m | femur length in high growth mice 4 (mouse) | | | Not determined | | 11 | 59866991 | 93867100 | Mouse | n/a | region | qtl |
| 1000 | 1301319 | Dautb4_m | dopamine uptake transporter binding 4 (mouse) | | | Not determined | | 11 | 62078681 | 96078829 | Mouse | n/a | region | qtl |
| 1000 | 1301956 | Orch3_m | autoimmune orchitis resistance 3 (mouse) | | | Not determined | | 11 | 62736435 | 96736588 | Mouse | n/a | region | qtl |
| 1000 | 1300765 | Bbaa4_m | B.burgdorferi-associated arthritis 4 (mouse) | | | Not determined | | 11 | 66403911 | 100404032 | Mouse | n/a | region | qtl |
| 1000 | 1301030 | Bw4_m | body weight QTL 4 (mouse) | | | Not determined | | 11 | 66403911 | 100404032 | Mouse | n/a | region | qtl |
| 1000 | 1300784 | Prdt3_m | prion disease incubation time 3 (mouse) | | | Not determined | | 11 | 66656096 | 100656328 | Mouse | n/a | region | qtl |
| 1000 | 1357766 | Si5lq6_m | serum IGFBP-5 level QTL 6 (mouse) | | | Not determined | | 11 | 66656096 | 100656328 | Mouse | n/a | region | qtl |
| 1000 | 1301546 | Pcir2_m | periosteal circumference 2 (mouse) | | | Not determined | | 11 | 66656096 | 100656328 | Mouse | n/a | region | qtl |
| 1000 | 1301833 | Tbbmd5_m | total body bone mineral density 5 (mouse) | | | Not determined | | 11 | 66656096 | 100656328 | Mouse | n/a | region | qtl |
| 1000 | 4141264 | Qbis3_m | QTL for body weight independent of sex 3 (mouse) | | | Not determined | | 11 | 66656096 | 100656328 | Mouse | n/a | region | qtl |
| 1000 | 4141767 | Kwq15_m | kidney weight QTL 15 (mouse) | | | Not determined | | 11 | 66656096 | 100656328 | Mouse | n/a | region | qtl |
| 1000 | 4142191 | Lwq9_m | liver weight QTL 9 (mouse) | | | Not determined | | 11 | 66656096 | 100656328 | Mouse | n/a | region | qtl |
| 1000 | 1300628 | Lgth6_m | body length 6 (mouse) | | | Not determined | | 11 | 66656096 | 100656328 | Mouse | n/a | region | qtl |
| 1000 | 1301161 | Slthsr_m | semilethal sex-restricted (mouse) | | | Not determined | | 11 | 67654000 | 101654138 | Mouse | n/a | region | qtl |
| 1000 | 1357580 | Pltct2_m | platelet count 2 (mouse) | | | Not determined | | 11 | 69874328 | 103874451 | Mouse | n/a | region | qtl |
| 1000 | 1302124 | Eae7_m | susceptibility to experimental allergic encephalomyelitis 7 (mouse) | | | Not determined | | 11 | 69874328 | 103874451 | Mouse | n/a | region | qtl |
| 1000 | 4141339 | Nilac2_m | nicotine induced locomotor activity 2 (mouse) | | | Not determined | | 11 | 70613874 | 104614042 | Mouse | n/a | region | qtl |
| 1000 | 1301681 | Sle13_m | systematic lupus erythematosus susceptibility 13 (mouse) | | | Not determined | | 11 | 70613874 | 104614042 | Mouse | n/a | region | qtl |
| 1000 | 1300651 | Pcyts3_m | plasmacytoma susceptibility 3 (mouse) | | | Not determined | | 11 | 70613874 | 104614042 | Mouse | n/a | region | qtl |
| 1000 | 1558812 | Rafar_m | retinoic acid induced forelimb autopod reduction (mouse) | | | Not determined | | 11 | 70613874 | 104614042 | Mouse | n/a | region | qtl |
| 1000 | 1300957 | Pbd1_m | peak bone density 1 (mouse) | | | Not determined | | 11 | 71990137 | 105990222 | Mouse | n/a | region | qtl |
| 1000 | 1301404 | Sbmd4_m | spinal bone mineral density 4 (mouse) | | | Not determined | | 11 | 71990137 | 105990222 | Mouse | n/a | region | qtl |
| 1000 | 1301078 | Alcp2_m | alcohol preference locus 2 (mouse) | | | Not determined | | 11 | 72132472 | 84654138 | Mouse | n/a | region | qtl |
| 1000 | 1301654 | Aliq1_m | acute lung injury QTL 1 (mouse) | | | Not determined | | 11 | 72696613 | 106696777 | Mouse | n/a | region | qtl |
| 1000 | 1301310 | Tmevd5_m | Theiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 5 (mouse) | | | Not determined | | 11 | 72696613 | 106696777 | Mouse | n/a | region | qtl |
| 1000 | 1558996 | Bomd7_m | bone mineral density 7 (mouse) | | | Not determined | | 11 | 72696613 | 106696777 | Mouse | n/a | region | qtl |
| 1000 | 4142348 | Pstc2_m | periosteal circumference 2 (mouse) | | | Not determined | | 11 | 72789103 | 106789221 | Mouse | n/a | region | qtl |
| 1000 | 1357551 | Stzid_m | streptozotocin induced diabetes susceptibility (mouse) | | | Not determined | | 11 | 73114273 | 107114396 | Mouse | n/a | region | qtl |
| 1000 | 1301414 | Heal10_m | wound healing/regeneration 10 (mouse) | | | Not determined | | 11 | 77407671 | 111407810 | Mouse | n/a | region | qtl |
| 1000 | 4141332 | Azdm5_m | Alzheimer's disease modifier 5 (mouse) | | | Not determined | | 11 | 77407671 | 111407810 | Mouse | n/a | region | qtl |
| 1000 | 1301535 | Pas5b_m | pulmonary adenoma susceptibility 5b (mouse) | | | Not determined | | 11 | 79146953 | 113147090 | Mouse | n/a | region | qtl |
| 1000 | 1301038 | C10bw3_m | castaneus 10 week body weight 3 (mouse) | | | Not determined | | 11 | 79868181 | 113868314 | Mouse | n/a | region | qtl |
| 1000 | 1301153 | Estq3_m | estradiol regulated response QTL 3 (mouse) | | | Not determined | | 11 | 79868181 | 113868314 | Mouse | n/a | region | qtl |
| 1000 | 4142145 | Wg7_m | weight gain in high growth mice 7 (mouse) | | | Not determined | | 11 | 79868181 | 113868314 | Mouse | n/a | region | qtl |
| 1000 | 4142072 | Brwq1_m | brain weight QTL 1 (mouse) | | | Not determined | | 11 | 79868181 | 113868314 | Mouse | n/a | region | qtl |
| 1000 | 1300766 | Skull16_m | skull morphology 16 (mouse) | | | Not determined | | 11 | 81544969 | 115545124 | Mouse | n/a | region | qtl |
| 1000 | 1301313 | Pas5a_m | pulmonary adenoma susceptibility 5a (mouse) | | | Not determined | | 11 | 81544969 | 115545124 | Mouse | n/a | region | qtl |
| 1000 | 1558999 | Ethm4_m | ethanol induced thermoregulation 4 (mouse) | | | Not determined | | 11 | 81544969 | 115545124 | Mouse | n/a | region | qtl |
| 1000 | 1300649 | Crhq1_m | compensatory renal hypertrophy QTL 1 (mouse) | | | Not determined | | 11 | 81544969 | 115545124 | Mouse | n/a | region | qtl |