| 631841 | Niddm39 | Non-insulin dependent diabetes mellitus QTL 39 | 3.36 | | Glucose level | post-pancreatectomy | 3 | 93894678 | 161985069 | Rat | n/a | region | qtl |
| 631665 | Bw8 | Body weight QTL 8 | 5.5 | | Body weight | | 3 | 47722628 | 119673738 | Rat | n/a | region | qtl |
| 631649 | Bp123 | Blood pressure QTL 123 | 3.2 | | Blood pressure | salt-loaded systolic | 3 | 89819539 | 134819539 | Rat | n/a | region | qtl |
| 724532 | Cm17 | Cardiac mass QTL 17 | 2 | | Cardiac mass | | 3 | 96192217 | 141192217 | Rat | n/a | region | qtl |
| 1300161 | Rf10 | Renal function QTL 10 | 3.57 | | Renal function | hypertension related renal vascular resistance | 3 | 101298208 | 163335184 | Rat | n/a | region | qtl |
| 1300111 | Rf12 | Renal function QTL 12 | 3.78 | | Renal function | salt-loaded renal blood flow | 3 | 58764506 | 121619110 | Rat | n/a | region | qtl |
| 1354611 | Despr2 | Despair related QTL 2 | | .0028 | Activity level | immobility level | 3 | 97595472 | 142595472 | Rat | n/a | region | qtl |
| 1358204 | Insglur1 | Insulin/glucose ratio QTL 1 | 3.8 | | Insulin/glucose ratio | | 3 | 115996080 | 136402080 | Rat | n/a | region | qtl |
| 1358885 | Bp251 | Blood pressure QTL 251 | 3.8 | | Blood pressure | mean arterial | 3 | 10267741 | 121619110 | Rat | n/a | region | qtl |
| 1358888 | Bp264 | Blood pressure QTL 264 | 4.43 | | Blood pressure | mean arterial | 3 | 10267741 | 121619110 | Rat | n/a | region | qtl |
| 1581568 | Rf53 | Renal function QTL 53 | | | Renal function | urine protein level | 3 | 53876762 | 163443738 | Rat | n/a | region | qtl |
| 1578754 | Stresp16 | Stress response QTL 16 | 4 | .001 | Stress response | plasma renin activity | 3 | 113902006 | 158902006 | Rat | n/a | region | qtl |
| 1358362 | Srcrt2 | Stress Responsive Cort QTL 2 | 2.78 | | Hypothalamic-pituitary-adrenal axis | corticosterone post-stress | 3 | 35237920 | 134686096 | Rat | n/a | region | qtl |
| 1581503 | Cm58 | Cardiac mass QTL 58 | 2.7 | .05 | Cardiac mass | left ventricle | 3 | 41054012 | 121619110 | Rat | n/a | region | qtl |
| 1581546 | Pur13 | Proteinuria QTL 13 | 2.93 | .0335 | Renal function | urine protein level | 3 | 76620970 | 148642985 | Rat | n/a | region | qtl |
| 2301970 | Bw81 | Body weight QTL 81 | 5.19 | | Body weight | | 3 | 39052756 | 158038027 | Rat | n/a | region | qtl |
| 2292591 | Esta4 | Estrogen-induced thymic atrophy QTL 4 | | | Gland mass | thymus | 3 | 44551252 | 149496698 | Rat | n/a | region | qtl |
| 2293087 | Iddm27 | Insulin dependent diabetes mellitus QTL 27 | 2.37 | | Glucose level | insulin-dependent | 3 | 96506745 | 149496698 | Rat | n/a | region | qtl |
| 2312670 | Bw94 | Body weight QTL 94 | | .01 | Body weight | adiposity index | 3 | 97523869 | 170016653 | Rat | n/a | region | qtl |
| 2312673 | Scl63 | Serum cholesterol level QTL 63 | | .001 | Lipid level | serum cholesterol | 3 | 97523869 | 170016653 | Rat | n/a | region | qtl |
| 2312659 | Slep7 | Serum leptin concentration QTL 7 | | .001 | Hormone level | leptin | 3 | 97523869 | 170016653 | Rat | n/a | region | qtl |
| 2302373 | Gluco39 | Glucose level QTL 39 | 5.01 | | Glucose level | | 3 | 97524000 | 163778606 | Rat | n/a | region | qtl |
| 2301414 | Kidm37 | Kidney mass QTL 37 | | .001 | Kidney mass | | 3 | 68816911 | 121619110 | Rat | n/a | region | qtl |
| 2301971 | Cm71 | Cardiac mass QTL 71 | 4.63 | | Cardiac mass | left ventricle | 3 | 39052756 | 158038027 | Rat | n/a | region | qtl |
| 1559282 | Emca5 | Estrogen-induced mammary cancer QTL 5 | 3.9 | | Mammary tumor susceptibility | estradiol-induced | 3 | 41054012 | 171063335 | Rat | n/a | region | qtl |
| 619618 | Rf3 | Renal disease susceptibility QTL 3 | 6.5 | .001 | Renal function | urine albumin excretion rate to body weight ratio | 3 | 108688653 | 153688653 | Rat | n/a | region | qtl |
