| 1000 | 1298088 | Edpm11 | Estrogen-dependent pituitary mass QTL 11 | 2.5 | | Gland mass | pituitary | 9 | 1 | 39963583 | Rat | n/a | region | qtl |
| 1000 | 1641911 | Alcrsp13 | Alcohol response QTL 13 | | | Alcohol response | | 9 | 1 | 39963583 | Rat | n/a | region | qtl |
| 1000 | 1354650 | Despr5 | Despair related QTL 5 | | .0017 | Activity level | immobility level | 9 | 1 | 42602240 | Rat | n/a | region | qtl |
| 1000 | 2303559 | Gluco54 | Glucose level QTL 54 | 2 | | Glucose level | post-restraint | 9 | 1 | 42602240 | Rat | n/a | region | qtl |
| 1000 | 2303170 | Bp332 | Blood pressure QTL 332 | 3.73 | .027 | Blood pressure | | 9 | 1526958 | 74813097 | Rat | n/a | region | qtl |
| 1000 | 631211 | Bw4 | Body weight QTL4 | 5.31 | | Body fat amount | retroperitoneal | 9 | 2948882 | 47948882 | Rat | n/a | region | qtl |
| 1000 | 631680 | Cm11 | Cardiac mass QTL 11 | 3.1 | .00089 | Cardiac mass | left ventricle | 9 | 17330701 | 62330701 | Rat | n/a | region | qtl |
| 1000 | 61450 | Ciaa3 | CIA Autoantibody QTL 3 | 6.5 | | Anti-type II collagen autoantibody titer | collagen induced | 9 | 18347567 | 63347567 | Rat | n/a | region | qtl |
| 1000 | 70186 | Niddm26 | Non-insulin dependent diabetes mellitus QTL 26 | 3.87 | | Glucose level | postprandial | 9 | 18347567 | 84432994 | Rat | n/a | region | qtl |
| 1000 | 1598823 | Memor16 | Memory QTL 16 | 1.9 | | Memory | social recognition | 9 | 18410299 | 47035878 | Rat | n/a | region | qtl |
| 1000 | 7207805 | Bmd88 | Bone mineral density QTL 88 | 4 | | Bone mineral density | Total volumetric bone mineral density | 9 | 20102034 | 55470344 | Rat | n/a | region | qtl |
| 1000 | 1300180 | Bw14 | Body weight QTL 14 | 3.776 | | Body weight | salt-loaded | 9 | 20102034 | 58516896 | Rat | n/a | region | qtl |
| 1000 | 7207814 | Bmd91 | Bone mineral density QTL 91 | 3.5 | | Bone mineral density | Femur neck cross-sectional total area | 9 | 20102447 | 81885455 | Rat | n/a | region | qtl |
| 1000 | 70218 | Cm28 | Cardiac mass QTL 28 | 8.3 | .0001 | Cardiac mass | salt-loaded | 9 | 21667066 | 77171049 | Rat | n/a | region | qtl |
| 1000 | 724544 | Uae9 | Urinary albumin excretion QTL 9 | 4.5 | | Renal function | urine albumin level | 9 | 21667066 | 105580061 | Rat | n/a | region | qtl |
| 1000 | 731164 | Uae25 | Urinary albumin excretion QTL 25 | 3.5 | .0001 | Renal function | urine albumin level | 9 | 22066101 | 99799902 | Rat | n/a | region | qtl |
| 1000 | 1641894 | Alcrsp12 | Alcohol response QTL 12 | | | Alcohol response | | 9 | 24535785 | 69535785 | Rat | n/a | region | qtl |
| 1000 | 1598834 | Memor11 | Memory QTL 11 | 2.5 | | Memory | navigation-spatial | 9 | 33496794 | 75633613 | Rat | n/a | region | qtl |
| 1000 | 2290450 | Scl57 | Serum cholesterol level QTL 57 | 4.15 | | Lipid level | cholesterol level | 9 | 33496794 | 94217673 | Rat | n/a | region | qtl |
| 1000 | 61352 | Bp34 | Blood pressure QTL 34 | 5 | | Blood pressure | salt-loaded systolic | 9 | 39390033 | 77170797 | Rat | n/a | region | qtl |