| 1000 | 1354603 | Bp243 | Blood pressure QTL 243 | 3.9 | | Blood pressure | diastolic | 2 | 1 | 131530924 | Rat | n/a | region | qtl |
| 1000 | 61355 | Bp36 | Blood pressure QTL 36 | 2.9 | | Blood pressure | | 2 | 3429900 | 105503269 | Rat | n/a | region | qtl |
| 1000 | 738012 | Anxrr3 | Anxiety related response QTL 3 | 3.8 | | Anxiety response | open field inner locomotion | 2 | 8682344 | 53682344 | Rat | n/a | region | qtl |
| 1000 | 1578664 | Bmd9 | Bone mineral QTL density 9 | 5 | | Bone mineral density | femoral neck total vBMD | 2 | 9670332 | 49013509 | Rat | n/a | region | qtl |
| 1000 | 1578671 | Bmd10 | Bone mineral density QTL 10 | 5.4 | | Bone mineral density | femoral neck cortical vBMD | 2 | 9670332 | 227150249 | Rat | n/a | region | qtl |
| 1000 | 731184 | Mamtr4 | Mammary tumor resistance QTL 4 | | .0003 | Mammary tumor resistance | | 2 | 14747814 | 59747814 | Rat | n/a | region | qtl |
| 1000 | 1357990 | Ael1 | Aortic elastin QTL 1 | 3.1 | .00091 | Protein level | aortic elastin | 2 | 18905511 | 63905511 | Rat | n/a | region | qtl |
| 1000 | 2300168 | Bmd47 | Bone mineral density QTL 47 | 6.6 | .0001 | Bone mineral density | | 2 | 20374107 | 65374107 | Rat | n/a | region | qtl |
| 1000 | 1302794 | Stl27 | Serum triglyceride level QTL 27 | 4.4 | .0001 | Lipid level | triglyceride level | 2 | 24474447 | 148790758 | Rat | n/a | region | qtl |
| 1000 | 1358894 | Kidm24 | Kidney mass QTL 24 | 4.03 | | Kidney mass | | 2 | 24474447 | 163154358 | Rat | n/a | region | qtl |
| 1000 | 1358899 | Kidm23 | Kidney mass QTL 23 | 3.88 | | Kidney mass | | 2 | 24474447 | 163154358 | Rat | n/a | region | qtl |
| 1000 | 1358901 | Cm38 | Cardiac mass QTL 38 | 2 | | Cardiac mass | | 2 | 24474447 | 163154358 | Rat | n/a | region | qtl |
| 1000 | 1358904 | Cm39 | Cardiac mass QTL 39 | 2.26 | | Cardiac mass | | 2 | 24474447 | 163154358 | Rat | n/a | region | qtl |
| 1000 | 1358910 | Kidm27 | Kidney mass QTL 27 | 5.77 | | Kidney mass | | 2 | 24474447 | 163154358 | Rat | n/a | region | qtl |
| 1000 | 1358911 | Kidm28 | Kidney mass QTL 28 | 5.42 | | Kidney mass | | 2 | 24474447 | 163154358 | Rat | n/a | region | qtl |
| 1000 | 1358913 | Cm41 | Cardiac mass QTL 41 | 2.73 | | Cardiac mass | | 2 | 24474447 | 212169089 | Rat | n/a | region | qtl |
| 1000 | 1358917 | Cm42 | Cardiac mass QTL 42 | 2.82 | | Cardiac mass | | 2 | 24474447 | 212169089 | Rat | n/a | region | qtl |
| 1000 | 1358908 | Bw49 | Body weight QTL 49 | 3.36 | | Body weight | | 2 | 24474676 | 163154227 | Rat | n/a | region | qtl |
| 1000 | 1358887 | Bw50 | Body weight QTL 50 | 2.39 | | Body weight | | 2 | 24474676 | 163154227 | Rat | n/a | region | qtl |
| 1000 | 1354617 | Bp240 | Blood pressure QTL 240 | 4 | | Blood pressure | systolic | 2 | 24496771 | 82826337 | Rat | n/a | region | qtl |
| 1000 | 1643006 | Pain1 | Pain QTL 1 | 3.63 | .005 | Pain | | 2 | 26101088 | 48244982 | Rat | n/a | region | qtl |
| 1000 | 1300160 | Hrtrt3 | Heart rate QTL 3 | 3.62 | | Heart rate | salt-loaded | 2 | 29237360 | 51821161 | Rat | n/a | region | qtl |
| 1000 | 1300155 | Bp174 | Blood pressure QTL 174 | 4.09 | | Blood pressure | salt-loaded mean arterial | 2 | 29321080 | 74321080 | Rat | n/a | region | qtl |
| 1000 | 2299162 | Iddm32 | Insulin dependent diabetes mellitus QTL 32 | 2.36 | | Glucose level | insulin-dependent | 2 | 30109071 | 79796790 | Rat | n/a | region | qtl |
| 1000 | 2306903 | Bp336 | Blood pressure QTL 336 | | .01 | Blood pressure | salt-loaded systolic | 2 | 36432989 | 112326568 | Rat | n/a | region | qtl |
| 1000 | 70174 | BpQTLCluster2 | Blood pressure QTL cluster 2 | 2.86 | | Blood pressure | | 2 | 39828973 | 105443909 | Rat | n/a | region | qtl |
| 1000 | 61371 | Edpm1 | Estrogen-dependent pituitary mass QTL 1 | 4 | .66 | Gland mass | pituitary | 2 | 42866226 | 87866226 | Rat | n/a | region | qtl |
| 1000 | 61467 | Bp14 | Blood pressure QTL 14 | 2.2 | | Blood pressure | | 2 | 42866342 | 210636008 | Rat | n/a | region | qtl |
| 1000 | 2293676 | Bmd19 | Bone mineral density QTL 19 | 10.7 | .0001 | Bone mineral density | | 2 | 42874025 | 87874025 | Rat | n/a | region | qtl |
| 1000 | 2293682 | Bmd24 | Bone mineral density QTL 24 | 8.9 | .0001 | Bone mineral density | | 2 | 42874025 | 87874025 | Rat | n/a | region | qtl |
| 1000 | 2293671 | Bss44 | Bone structure and strength QTL 44 | 10.97 | .0001 | Bone structure | | 2 | 42874025 | 153832507 | Rat | n/a | region | qtl |
| 1000 | 631208 | Bw1 | Body weight QTL1 | 5.09 | | Body fat amount | mesenteric | 2 | 42882523 | 84991985 | Rat | n/a | region | qtl |
| 1000 | 1354601 | Slep1 | Serum leptin concentration QTL 1 | 5.39 | | Hormone level | leptin | 2 | 42882523 | 191378271 | Rat | n/a | region | qtl |