| 1000 | 631263 | Cm24 | Cardiac mass QTL 24 | 3.5 | | Cardiac mass | left ventricle | 5 | 150310201 | 165073513 | Rat | n/a | region | qtl |
| 1000 | 631505 | Bp103 | Blood pressure QTL 103 | 3.2 | | Blood pressure | systolic | 5 | 139690801 | 171801867 | Rat | n/a | region | qtl |
| 1000 | 61444 | Strs2 | Sensitivity to stroke QTL 2 | 4.7 | | Stroke susceptibility | latency until stroke | 5 | 142575172 | 173096209 | Rat | n/a | region | qtl |
| 1000 | 634349 | Bp139 | Blood pressure QTL 139 | | .001 | Blood pressure | systolic | 5 | 135877124 | 173096209 | Rat | n/a | region | qtl |
| 1000 | 724525 | Bp147 | Blood pressure QTL 147 | 4.3 | .0001 | Blood pressure | systolic | 5 | 132950669 | 173096209 | Rat | n/a | region | qtl |
| 1000 | 631562 | Apr2 | Acute phase response QTL 2 | 3.7 | | Alpha1 acid glycoprotein level | pristane induced | 5 | 142573432 | 173096209 | Rat | n/a | region | qtl |
| 1000 | 738018 | Anxrr4 | Anxiety related response QTL 4 | 5.1 | | Anxiety response | open field inner locomotion | 5 | 136765530 | 173096209 | Rat | n/a | region | qtl |
| 1000 | 1298089 | Scl14 | Serum cholesterol level QTL 14 | 5.8 | .0004 | Lipid level | cholesterol | 5 | 115772027 | 160772027 | Rat | n/a | region | qtl |
| 1000 | 70156 | Niddm30 | Non-insulin dependent diabetes mellitus QTL 30 | 3.98 | | Glucose level | postprandial | 5 | 135910738 | 157584492 | Rat | n/a | region | qtl |
| 1000 | 1331721 | Bp210 | Blood pressure QTL 210 | 3.413 | | Blood pressure | time series calculation | 5 | 149757277 | 173096209 | Rat | n/a | region | qtl |
| 1000 | 61393 | Bp7 | Blood pressure QTL 7 | 4.5 | .0001 | Blood pressure | salt-loaded systolic | 5 | 62555131 | 168174140 | Rat | n/a | region | qtl |
| 1000 | 1300119 | Bp180 | Blood pressure QTL 180 | 3.82 | | Blood pressure | salt-loaded time series calculation | 5 | 151039725 | 164343989 | Rat | n/a | region | qtl |
| 1000 | 1354598 | Srn6 | Serum renin concentration QTL 6 | 3.8 | | Renin concentration | serum | 5 | 71971592 | 157597184 | Rat | n/a | region | qtl |
| 1000 | 1598819 | Bp292 | Blood pressure QTL 292 | 4.3 | | Blood pressure | systolic | 5 | 134356746 | 173096209 | Rat | n/a | region | qtl |
| 1000 | 1578766 | Tcas11 | Tongue tumor susceptibility QTL 11 | 4.12 | | Tongue tumor susceptibility | tongue tumor number | 5 | 17517235 | 168005953 | Rat | n/a | region | qtl |
| 1000 | 1598861 | Cm64 | Cardiac mass QTL 64 | 2.9 | | Cardiac mass | | 5 | 134356746 | 173096209 | Rat | n/a | region | qtl |
| 1000 | 1598847 | Cm62 | Cardiac mass QTL 62 | 3.4 | | Cardiac mass | | 5 | 115772027 | 160772027 | Rat | n/a | region | qtl |
| 1000 | 2293642 | Bss37 | Bone structure and strength QTL 37 | 4.64 | .0001 | Bone strength | | 5 | 126963761 | 157597184 | Rat | n/a | region | qtl |
| 1000 | 2313096 | Bmd78 | Bone mineral density QTL 78 | 3.1 | .0001 | Bone mineral density | | 5 | 151060403 | 168006088 | Rat | n/a | region | qtl |
| 1000 | 2317056 | Wbc3 | White blood cell count QTL 3 | 2.51 | .01 | White blood cell count | | 5 | 112840801 | 157840801 | Rat | n/a | region | qtl |
| 1000 | 1302790 | Scl20 | Serum cholesterol QTL 20 | 6.4 | .0001 | Lipid level | cholesterol level | 5 | 86116638 | 172913795 | Rat | n/a | region | qtl |
| 1000 | 1549838 | Bss4 | Bone structure and strength QTL 4 | 9.2 | | Bone structure and strength | Femoral midshaft moment of inertia | 5 | 113689301 | 158689301 | Rat | n/a | region | qtl |
| 1000 | 7207481 | Bss106 | Bone structure and strength QTL 106 | 7.9 | | Bone strength | Femoral ultimate force | 5 | 113689301 | 158689301 | Rat | n/a | region | qtl |
| 1000 | 7207491 | Bss112 | Bone structure and strength QTL 112 | 7 | | Bone structure | Femoral midshaft cortical area | 5 | 113689301 | 158689301 | Rat | n/a | region | qtl |
| 1000 | 7207486 | Bss109 | Bone structure and strength QTL 109 | | | Bone strength | Femoral energy to break | 5 | 113689301 | 158689301 | Rat | n/a | region | qtl |
| 1000 | 7207488 | Bss110 | Bone structure and strength QTL 1 | 8.4 | | Bone strength | Femoral stiffness | 5 | 113689301 | 158689301 | Rat | n/a | region | qtl |
| 1000 | 2302369 | Scl60 | Serum cholesterol level QTL 60 | 3.13 | | Lipid level | serum total cholesterol | 5 | 150236110 | 167844737 | Rat | n/a | region | qtl |