| 1000 | 7700759 | LOC102555808 | uncharacterized LOC102555808 | | 1 | 225114347 | 225140414 | Rat | n/a | Region | gene |
| 999 | 7566943 | LOC102555989 | uncharacterized LOC102555989 | | 1 | 225289547 | 225334401 | Rat | n/a | Region | gene |
| 998 | 2325049 | Eif4e-ps2 | eukaryotic translation initiation factor 4E, pseudogene 2 | | 1 | 225371014 | 225371531 | Rat | n/a | Region | gene |
| 997 | 1307779 | Rfx3 | regulatory factor X3 | | 1 | 225449872 | 225709622 | Rat | n/a | Region | gene |
| 996 | 41377637 | LOC120100479 | U6atac minor spliceosomal RNA | | 1 | 225488774 | 225488891 | Rat | n/a | Region | gene |
| 995 | 41097335 | LOC120100391 | small nucleolar RNA SNORA51 | | 1 | 225495834 | 225495966 | Rat | n/a | Region | gene |
| 994 | 7517961 | Thoc3-ps1 | THO complex 3, pseudogene 1 | | 1 | 225665659 | 225666454 | Rat | n/a | Region | gene |
| 993 | 1589453 | Ppid-ps2 | peptidylprolyl isomerase D, pseudogene 2 | | 1 | 225740072 | 225741290 | Rat | n/a | Region | gene |
| 992 | 41401218 | Rnu6-613 | RNA, U6 small nuclear 613 | | 1 | 225971183 | 225971289 | Rat | n/a | Region | gene |
| 991 | 1565505 | Glis3 | GLIS family zinc finger 3 | | 1 | 225976029 | 226395849 | Rat | n/a | Region | gene |
| 990 | 41142846 | LOC120098084 | uncharacterized LOC120098084 | | 1 | 226451090 | 226457544 | Rat | n/a | Region | gene |
| 989 | 7715694 | LOC102546345 | uncharacterized LOC102546345 | | 1 | 226521231 | 226549807 | Rat | n/a | Region | gene |
| 988 | 41277114 | Rnu6-525 | RNA, U6 small nuclear 525 | | 1 | 226541765 | 226541871 | Rat | n/a | Region | gene |
| 987 | 3696 | Slc1a1 | solute carrier family 1 member 1 | | 1 | 226549932 | 226631925 | Rat | n/a | Region | gene |
| 986 | 1310039 | Spata6l | spermatogenesis associated 6-like | | 1 | 226630470 | 226682979 | Rat | n/a | Region | gene |
| 985 | 1566000 | Plpp6 | phospholipid phosphatase 6 | | 1 | 226679100 | 226681952 | Rat | n/a | Region | gene |
| 984 | 1588239 | Phyh-ps1 | phytanoyl-CoA 2-hydroxylase, pseudogene 1 | | 1 | 226688444 | 226689337 | Rat | n/a | Region | gene |
| 983 | 1565057 | Tekt5l1 | tektin 5 like 1 | | 1 | 226689519 | 226705125 | Rat | n/a | Region | gene |
| 982 | 1309295 | Cdc37l1 | cell division cycle 37-like 1 | | 1 | 226705019 | 226733994 | Rat | n/a | Region | gene |
| 981 | 619885 | Ak3 | adenylate kinase 3 | | 1 | 226737472 | 226764647 | Rat | n/a | Region | gene |
| 980 | 41171347 | LOC120100015 | uncharacterized LOC120100015 | | 1 | 226782511 | 226787383 | Rat | n/a | Region | gene |
| 979 | 1305320 | Rcl1 | RNA terminal phosphate cyclase-like 1 | | 1 | 226824561 | 226869046 | Rat | n/a | Region | gene |
| 978 | 2325609 | Mir101-2 | microRNA 101-2 | | 1 | 226860371 | 226860467 | Rat | n/a | Region | gene |
| 977 | 2939 | Jak2 | Janus kinase 2 | | 1 | 226995334 | 227054381 | Rat | n/a | Region | gene |
| 976 | 62061 | Insl6 | insulin-like 6 | | 1 | 227069958 | 227073493 | Rat | n/a | Region | gene |
| 975 | 7710008 | Phb1-ps9 | prohibitin 1, pseudogene 9 | | 1 | 227073574 | 227075424 | Rat | n/a | Region | gene |
| 974 | 3579 | Rln1 | relaxin 1 | | 1 | 227079960 | 227082960 | Rat | n/a | Region | gene |
| 973 | 1306839 | Plgrkt | plasminogen receptor with a C-terminal lysine | | 1 | 227099005 | 227111277 | Rat | n/a | Region | gene |
| 972 | 1566211 | Cd274 | CD274 molecule | | 1 | 227116674 | 227137379 | Rat | n/a | Region | gene |
| 971 | 1585881 | Nip7-ps2 | nucleolar pre-rRNA processing protein NIP7, pseudogene 2 | | 1 | 227152984 | 227153506 | Rat | n/a | Region | gene |
| 970 | 1306403 | Pdcd1lg2 | programmed cell death 1 ligand 2 | | 1 | 227158941 | 227223938 | Rat | n/a | Region | gene |
| 969 | 1310016 | Ric1 | RIC1 homolog, RAB6A GEF complex partner 1 | | 1 | 227285510 | 227384553 | Rat | n/a | Region | gene |
| 968 | 727831 | Ermp1 | endoplasmic reticulum metallopeptidase 1 | | 1 | 227383992 | 227422120 | Rat | n/a | Region | gene |
| 967 | 41025615 | LOC120100017 | uncharacterized LOC120100017 | | 1 | 227432377 | 227441119 | Rat | n/a | Region | gene |
| 966 | 41273033 | LOC120100018 | uncharacterized LOC120100018 | | 1 | 227451357 | 227453734 | Rat | n/a | Region | gene |
| 965 | 1306525 | Mlana | melan-A | | 1 | 227469537 | 227483343 | Rat | n/a | Region | gene |
| 964 | 1311595 | Brd10 | bromodomain containing 10 | | 1 | 227490983 | 227572246 | Rat | n/a | Region | gene |
| 963 | 11481274 | LOC108349433 | 60S ribosomal protein L7a pseudogene | | 1 | 227542130 | 227543021 | Rat | n/a | Region | gene |
| 962 | 1305165 | Ranbp6 | RAN binding protein 6 | | 1 | 227572394 | 227576915 | Rat | n/a | Region | gene |