| 68430 | Pdia3 | protein disulfide isomerase family A, member 3 | | 3 | 108388189 | 108412013 | Rat | n/a | Region | gene |
| 3734 | Sord | sorbitol dehydrogenase | | 3 | 109184697 | 109216133 | Rat | n/a | Region | gene |
| 61805 | Fgf7 | fibroblast growth factor 7 | | 3 | 113280448 | 113333279 | Rat | n/a | Region | gene |
| 70888 | Kcnip3 | potassium voltage-gated channel interacting protein 3 | | 3 | 114677027 | 114742923 | Rat | n/a | Region | gene |
| 3539 | Rasgrp1 | RAS guanyl releasing protein 1 | | 3 | 104168549 | 104230107 | Rat | n/a | Region | gene |
| 2189 | B2m | beta-2 microglobulin | | 3 | 109095740 | 109101764 | Rat | n/a | Region | gene |
| 619750 | Slc30a4 | solute carrier family 30 member 4 | | 3 | 109753270 | 109775306 | Rat | n/a | Region | gene |
| 61840 | Slc28a2 | solute carrier family 28 member 2 | | 3 | 109324815 | 109387702 | Rat | n/a | Region | gene |
| 2790 | Hdc | histidine decarboxylase | | 3 | 113847256 | 113865334 | Rat | n/a | Region | gene |
| 2936 | Ivd | isovaleryl-CoA dehydrogenase | | 3 | 105851710 | 105872144 | Rat | n/a | Region | gene |
| 2660 | Ganc | glucosidase, alpha; neutral C | | 3 | 107353369 | 107406104 | Rat | n/a | Region | gene |
| 3042 | Map1a | microtubule-associated protein 1A | | 3 | 108263217 | 108283936 | Rat | n/a | Region | gene |
| 628761 | Duox2 | dual oxidase 2 | | 3 | 109223809 | 109247023 | Rat | n/a | Region | gene |
| 621718 | Gpr176 | G protein-coupled receptor 176 | | 3 | 105236794 | 105337664 | Rat | n/a | Region | gene |
| 620908 | Fbn1 | fibrillin 1 | | 3 | 112554257 | 112750835 | Rat | n/a | Region | gene |
| 621435 | Prom2 | prominin 2 | | 3 | 114747654 | 114761787 | Rat | n/a | Region | gene |
| 620221 | Snap23 | synaptosome associated protein 23 | | 3 | 107514088 | 107546177 | Rat | n/a | Region | gene |
| 61976 | Ckmt1 | creatine kinase, mitochondrial 1 | | 3 | 108329859 | 108335760 | Rat | n/a | Region | gene |
| 619791 | Bub1b | BUB1 mitotic checkpoint serine/threonine kinase B | | 3 | 105563089 | 105615547 | Rat | n/a | Region | gene |
| 619950 | Itpka | inositol-trisphosphate 3-kinase A | | 3 | 106726036 | 106734601 | Rat | n/a | Region | gene |
| 620721 | Blvra | biliverdin reductase A | | 3 | 114340778 | 114366048 | Rat | n/a | Region | gene |
| 2269 | Capn3 | calpain 3 | | 3 | 107407518 | 107457858 | Rat | n/a | Region | gene |
| 621004 | Plcb2 | phospholipase C, beta 2 | | 3 | 105683676 | 105704384 | Rat | n/a | Region | gene |
| 621746 | Gchfr | GTP cyclohydrolase I feedback regulator | | 3 | 106158046 | 106162080 | Rat | n/a | Region | gene |
| 628883 | Ehd4 | EH-domain containing 4 | | 3 | 107058191 | 107121985 | Rat | n/a | Region | gene |
| 628658 | Bmf | Bcl2 modifying factor | | 3 | 105499534 | 105520159 | Rat | n/a | Region | gene |
| 620447 | Chp1 | calcineurin-like EF-hand protein 1 | | 3 | 106536009 | 106571255 | Rat | n/a | Region | gene |
| 628760 | Duox1 | dual oxidase 1 | | 3 | 109260526 | 109295588 | Rat | n/a | Region | gene |
| 1304669 | Ccndbp1 | cyclin D1 binding protein 1 | | 3 | 107962402 | 107974234 | Rat | n/a | Region | gene |
| 1305804 | Dusp2 | dual specificity phosphatase 2 | | 3 | 114556325 | 114558510 | Rat | n/a | Region | gene |
| 1306712 | Atp8b4 | ATPase phospholipid transporting 8B4 (putative) | | 3 | 113554979 | 113757635 | Rat | n/a | Region | gene |
| 1304858 | Vps39 | VPS39 subunit of HOPS complex | | 3 | 107266846 | 107304884 | Rat | n/a | Region | gene |
| 628774 | Bcl2l11 | Bcl2-like 11 | | 3 | 115366783 | 115404068 | Rat | n/a | Region | gene |
| 628791 | Cops2 | COP9 signalosome subunit 2 | | 3 | 113084174 | 113110090 | Rat | n/a | Region | gene |
| 620849 | Dut | deoxyuridine triphosphatase | | 3 | 112498864 | 112509994 | Rat | n/a | Region | gene |
| 1304904 | Gpat2 | glycerol-3-phosphate acyltransferase 2, mitochondrial | | 3 | 114646446 | 114657051 | Rat | n/a | Region | gene |
| 1306814 | Acoxl | acyl-CoA oxidase-like | | 3 | 115061069 | 115367032 | Rat | n/a | Region | gene |
| 620053 | Trpm7 | transient receptor potential cation channel, subfamily M, member 7 | | 3 | 114046258 | 114134799 | Rat | n/a | Region | gene |
| 3037 | Mal | mal, T-cell differentiation protein | | 3 | 114864378 | 114888136 | Rat | n/a | Region | gene |
| 1307516 | Ccdc32 | coiled-coil domain containing 32 | | 3 | 105998429 | 106010985 | Rat | n/a | Region | gene |
| 71090 | Gatm | glycine amidinotransferase | | 3 | 109658919 | 109675508 | Rat | n/a | Region | gene |
| 1307498 | Knl1 | kinetochore scaffold 1 | | 3 | 106029627 | 106091915 | Rat | n/a | Region | gene |
| 1305198 | Meis2 | Meis homeobox 2 | | 3 | 102742904 | 102944833 | Rat | n/a | Region | gene |
| 1306924 | Tubgcp4 | tubulin gamma complex component 4 | | 3 | 108141081 | 108172207 | Rat | n/a | Region | gene |
| 3685 | Slc12a1 | solute carrier family 12 member 1 | | 3 | 112406140 | 112482913 | Rat | n/a | Region | gene |
| 1305647 | Tmem62 | transmembrane protein 62 | | 3 | 107921940 | 107961830 | Rat | n/a | Region | gene |
| 1305829 | Lcmt2 | leucine carboxyl methyltransferase 2 | | 3 | 108099960 | 108102084 | Rat | n/a | Region | gene |
| 71103 | Slc27a2 | solute carrier family 27 member 2 | | 3 | 113804728 | 113842208 | Rat | n/a | Region | gene |
| 1306601 | Duoxa1 | dual oxidase maturation factor 1 | | 3 | 109249815 | 109260511 | Rat | n/a | Region | gene |
| 1307128 | Lrrc57 | leucine rich repeat containing 57 | | 3 | 107544786 | 107553256 | Rat | n/a | Region | gene |
| 3923 | Tyro3 | TYRO3 protein tyrosine kinase | | 3 | 106777686 | 106797154 | Rat | n/a | Region | gene |
| 1306202 | Ndufaf1 | NADH:ubiquinone oxidoreductase complex assembly factor 1 | | 3 | 106639025 | 106650549 | Rat | n/a | Region | gene |
| 1305074 | Trim69 | tripartite motif-containing 69 | | 3 | 109111468 | 109135255 | Rat | n/a | Region | gene |
| 1306547 | Myef2 | myelin expression factor 2 | | 3 | 112338241 | 112374122 | Rat | n/a | Region | gene |
| 2311261 | Ctxn2 | cortexin 2 | | 3 | 112390972 | 112401321 | Rat | n/a | Region | gene |
| 1307613 | Stard7 | StAR-related lipid transfer domain containing 7 | | 3 | 114487161 | 114515828 | Rat | n/a | Region | gene |
| 1307620 | Catsper2 | cation channel, sperm associated 2 | | 3 | 108368654 | 108389380 | Rat | n/a | Region | gene |
| 1307578 | Mapkbp1 | mitogen activated protein kinase binding protein 1 | | 3 | 106947342 | 106998368 | Rat | n/a | Region | gene |
| 1305348 | Cep152 | centrosomal protein 152 | | 3 | 112803185 | 112878298 | Rat | n/a | Region | gene |
| 1305985 | Golm2 | golgi membrane protein 2 | | 3 | 108827017 | 108896207 | Rat | n/a | Region | gene |
| 1306771 | Cdan1 | codanin 1 | | 3 | 107675147 | 107689811 | Rat | n/a | Region | gene |
| 1311707 | Bub1 | BUB1 mitotic checkpoint serine/threonine kinase | | 3 | 115020254 | 115051650 | Rat | n/a | Region | gene |
| 1309917 | Ell3 | elongation factor for RNA polymerase II 3 | | 3 | 108413035 | 108417181 | Rat | n/a | Region | gene |
| 1311047 | Sptbn5 | spectrin, beta, non-erythrocytic 5 | | 3 | 107013783 | 107054878 | Rat | n/a | Region | gene |
| 1309740 | Dll4 | delta like canonical Notch ligand 4 | | 3 | 106317114 | 106327004 | Rat | n/a | Region | gene |
| 1308506 | Srp14 | signal recognition particle 14 | | 3 | 105442184 | 105445875 | Rat | n/a | Region | gene |
| 1307285 | Ciao1 | cytosolic iron-sulfur assembly component 1 | | 3 | 114458671 | 114465928 | Rat | n/a | Region | gene |
| 1309744 | Tmem127 | transmembrane protein 127 | | 3 | 114466095 | 114478894 | Rat | n/a | Region | gene |
| 1310208 | Bloc1s6 | biogenesis of lysosomal organelles complex 1 subunit 6 | | 3 | 109816397 | 109826528 | Rat | n/a | Region | gene |
| 1308015 | Dnajc17 | DnaJ heat shock protein family (Hsp40) member C17 | | 3 | 106162197 | 106195771 | Rat | n/a | Region | gene |
| 1306874 | Fsip1 | fibrous sheath interacting protein 1 | | 3 | 105074584 | 105217180 | Rat | n/a | Region | gene |
| 1310869 | Mall | mal, T-cell differentiation protein-like | | 3 | 114927897 | 114950840 | Rat | n/a | Region | gene |
| 1311144 | Dtwd1 | DTW domain containing 1 | | 3 | 113392402 | 113409322 | Rat | n/a | Region | gene |
| 1303240 | Knstrn | kinetochore-localized astrin/SPAG5 binding protein | | 3 | 105800762 | 105820555 | Rat | n/a | Region | gene |
| 1311439 | Eif2ak4 | eukaryotic translation initiation factor 2 alpha kinase 4 | | 3 | 105356261 | 105441630 | Rat | n/a | Region | gene |
| 1560391 | Gabpb1 | GA binding protein transcription factor subunit beta 1 | | 3 | 113879972 | 113924742 | Rat | n/a | Region | gene |
| 1308318 | Mrps5 | mitochondrial ribosomal protein S5 | | 3 | 114821046 | 114837291 | Rat | n/a | Region | gene |
| 1310910 | Sema6d | semaphorin 6D | | 3 | 111883415 | 111941100 | Rat | n/a | Region | gene |
| 1308658 | Pla2g4b | phospholipase A2 group IVB | | 3 | 107004238 | 107013853 | Rat | n/a | Region | gene |
| 1310969 | Ino80 | INO80 complex ATPase subunit | | 3 | 106368455 | 106465716 | Rat | n/a | Region | gene |
| 1311661 | Ttbk2 | tau tubulin kinase 2 | | 3 | 107691123 | 107802911 | Rat | n/a | Region | gene |
| 1311457 | Hypk | Huntingtin interacting protein K | | 3 | 108434997 | 108436370 | Rat | n/a | Region | gene |
| 1309417 | Tmem87a | transmembrane protein 87A | | 3 | 107307726 | 107353571 | Rat | n/a | Region | gene |
| 1309219 | Ctdspl2 | CTD small phosphatase like 2 | | 3 | 108915263 | 108970620 | Rat | n/a | Region | gene |
| 1306213 | Pak6 | p21 (RAC1) activated kinase 6 | | 3 | 105638248 | 105674399 | Rat | n/a | Region | gene |
| 1310565 | Slc24a5 | solute carrier family 24 member 5 | | 3 | 112319349 | 112338889 | Rat | n/a | Region | gene |
| 1307887 | Patl2 | PAT1 homolog 2 | | 3 | 109072958 | 109087425 | Rat | n/a | Region | gene |
| 1304979 | Usp8 | ubiquitin specific peptidase 8 | | 3 | 113962136 | 114009683 | Rat | n/a | Region | gene |
| 1308039 | Tp53bp1 | tumor protein p53 binding protein 1 | | 3 | 108166574 | 108270229 | Rat | n/a | Region | gene |
| 1308136 | Nphp1 | nephrocystin 1 | | 3 | 114960650 | 115016234 | Rat | n/a | Region | gene |
| 1308691 | Galk2 | galactokinase 2 | | 3 | 113110057 | 113243014 | Rat | n/a | Region | gene |
| 1308697 | Rmdn3 | regulator of microtubule dynamics 3 | | 3 | 106125961 | 106146568 | Rat | n/a | Region | gene |
| 1305306 | Epb42 | erythrocyte membrane protein band 4.2 | | 3 | 107979709 | 107997932 | Rat | n/a | Region | gene |
| 1309616 | Wdr76 | WD repeat domain 76 | | 3 | 108456784 | 108491528 | Rat | n/a | Region | gene |
| 1311552 | Ppip5k1 | diphosphoinositol pentakisphosphate kinase 1 | | 3 | 108284120 | 108327683 | Rat | n/a | Region | gene |
| 1307153 | Chac1 | ChaC glutathione-specific gamma-glutamylcyclotransferase 1 | | 3 | 106342302 | 106345526 | Rat | n/a | Region | gene |
| 1305764 | Nusap1 | nucleolar and spindle associated protein 1 | | 3 | 106603273 | 106633428 | Rat | n/a | Region | gene |
| 1310654 | Rtf1 | Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) | | 3 | 106659363 | 106718956 | Rat | n/a | Region | gene |
| 1309569 | Disp2 | dispatched RND transporter family member 2 | | 3 | 105762303 | 105777826 | Rat | n/a | Region | gene |
| 1311556 | Vps18 | VPS18 core subunit of CORVET and HOPS complexes | | 3 | 106279444 | 106290298 | Rat | n/a | Region | gene |
| 1308735 | Spred1 | sprouty-related, EVH1 domain containing 1 | | 3 | 103983120 | 104050321 | Rat | n/a | Region | gene |
| 1309323 | Ltk | leukocyte receptor tyrosine kinase | | 3 | 106734675 | 106741552 | Rat | n/a | Region | gene |
| 1310595 | Pla2g4e | phospholipase A2, group IVE | | 3 | 107132540 | 107198609 | Rat | n/a | Region | gene |
| 1306147 | Rpusd2 | RNA pseudouridine synthase domain containing 2 | | 3 | 106017759 | 106023010 | Rat | n/a | Region | gene |
| 1562279 | Astl | astacin like metalloendopeptidase | | 3 | 114563135 | 114580295 | Rat | n/a | Region | gene |
| 1562702 | Eid1 | EP300 interacting inhibitor of differentiation 1 | | 3 | 112922961 | 112924680 | Rat | n/a | Region | gene |
| 1562705 | Shf | Src homology 2 domain containing F | | 3 | 109296517 | 109316315 | Rat | n/a | Region | gene |
| 628891 | Ppp1r14d | protein phosphatase 1, regulatory (inhibitor) subunit 14D | | 3 | 106205043 | 106219290 | Rat | n/a | Region | gene |
| 1566077 | Serinc4 | serine incorporator 4 | | 3 | 108428896 | 108434778 | Rat | n/a | Region | gene |
| 1564751 | Usp50 | ubiquitin specific peptidase 50 | | 3 | 114012104 | 114035468 | Rat | n/a | Region | gene |
| 1561554 | Frmd5 | FERM domain containing 5 | | 3 | 108492099 | 108763715 | Rat | n/a | Region | gene |
| 1564603 | Fam98b | family with sequence similarity 98, member B | | 3 | 104134803 | 104164249 | Rat | n/a | Region | gene |
| 1559930 | Secisbp2l | SECIS binding protein 2-like | | 3 | 112989613 | 113036060 | Rat | n/a | Region | gene |
| 1563603 | Rad51 | RAD51 recombinase | | 3 | 106099753 | 106125038 | Rat | n/a | Region | gene |
| 1564263 | Oip5 | Opa interacting protein 5 | | 3 | 106593746 | 106603281 | Rat | n/a | Region | gene |
| 1561576 | Zfyve19 | zinc finger FYVE-type containing 19 | | 3 | 106195779 | 106203969 | Rat | n/a | Region | gene |
| 1562326 | Ubr1 | ubiquitin protein ligase E3 component n-recognin 1 | | 3 | 107813721 | 107921701 | Rat | n/a | Region | gene |
| 1303138 | Spint1 | serine peptidase inhibitor, Kunitz type 1 | | 3 | 106231082 | 106244121 | Rat | n/a | Region | gene |
| 1561323 | Rpl9-ps28 | ribosomal protein L9, pseudogene 28 | | 3 | 114670948 | 114671735 | Rat | n/a | Region | gene |
| 2057 | Adra2b | adrenoceptor alpha 2B | | 3 | 114585174 | 114589220 | Rat | n/a | Region | gene |
| 1563001 | Sppl2a | signal peptide peptidase-like 2A | | 3 | 114149337 | 114193408 | Rat | n/a | Region | gene |
| 1359517 | Adal | adenosine deaminase-like | | 3 | 108101857 | 108119557 | Rat | n/a | Region | gene |
| 1561120 | Snrnp200 | small nuclear ribonucleoprotein U5 subunit 200 | | 3 | 114428854 | 114458194 | Rat | n/a | Region | gene |
| 628824 | Rhov | ras homolog family member V | | 3 | 106260774 | 106270009 | Rat | n/a | Region | gene |
| 1561009 | Exd1 | exonuclease 3'-5' domain containing 1 | | 3 | 106507839 | 106535922 | Rat | n/a | Region | gene |
| 1564158 | Itpripl1 | ITPRIP like 1 | | 3 | 114403123 | 114407917 | Rat | n/a | Region | gene |
| 1359583 | C3h15orf48 | similar to human chromosome 15 open reading frame 48 | | 3 | 109719952 | 109723505 | Rat | n/a | Region | gene |
| 1359452 | Fam227b | family with sequence similarity 227, member B | | 3 | 113226662 | 113392396 | Rat | n/a | Region | gene |
| 1566233 | Dppa3-ps1 | developmental pluripotency-associated 3, pseudogene 1 | | 3 | 106480217 | 106482060 | Rat | n/a | Region | gene |
| 1583955 | C3h15orf62 | similar to human chromosome 15 open reading frame 62 | | 3 | 106164179 | 106167404 | Rat | n/a | Region | gene |
| 1564504 | Sqor | sulfide quinone oxidoreductase | | 3 | 109841225 | 109886724 | Rat | n/a | Region | gene |
| 1583644 | Shc4 | SHC adaptor protein 4 | | 3 | 112880598 | 112974216 | Rat | n/a | Region | gene |
| 1585023 | Chst14 | carbohydrate sulfotransferase 14 | | 3 | 105916481 | 105918538 | Rat | n/a | Region | gene |
| 1563127 | Bahd1 | bromo adjacent homology domain containing 1 | | 3 | 105891207 | 105914414 | Rat | n/a | Region | gene |
| 1582782 | Rps25-ps11 | ribosomal protein S25, pseudogene 11 | | 3 | 107278950 | 107280025 | Rat | n/a | Region | gene |
| 1562232 | Mfap1a | microfibrillar-associated protein 1A | | 3 | 108440163 | 108456744 | Rat | n/a | Region | gene |
| 1560628 | Duoxa2 | dual oxidase maturation factor 2 | | 3 | 109245337 | 109249055 | Rat | n/a | Region | gene |
| 1566202 | Phgr1 | proline, histidine and glycine rich 1 | | 3 | 105742822 | 105760835 | Rat | n/a | Region | gene |
| 1565536 | Ccdc9b | coiled-coil domain containing 9B | | 3 | 105736120 | 105745039 | Rat | n/a | Region | gene |
| 1562529 | Spg11 | SPG11 vesicle trafficking associated, spatacsin | | 3 | 109007658 | 109072904 | Rat | n/a | Region | gene |
| 1561597 | Mga | MAX dimerization protein MGA | | 3 | 106851216 | 106942908 | Rat | n/a | Region | gene |
| 1563674 | Fahd2a | fumarylacetoacetate hydrolase domain containing 2A | | 3 | 114657176 | 114665349 | Rat | n/a | Region | gene |
| 1563680 | Cdin1 | CDAN1 interacting nuclease 1 | | 3 | 102441553 | 102646935 | Rat | n/a | Region | gene |
| 1565206 | Tmco5a | transmembrane and coiled-coil domains 5A | | 3 | 103732936 | 103746242 | Rat | n/a | Region | gene |
| 1562199 | Ap4e1 | adaptor related protein complex 4 subunit epsilon 1 | | 3 | 114272997 | 114339484 | Rat | n/a | Region | gene |
| 1593644 | Zfp106 | zinc finger protein 106 | | 3 | 107459232 | 107510507 | Rat | n/a | Region | gene |
| 1586187 | Eef2-ps2 | eukaryotic translation elongation factor 2, pseudogene 2 | | 3 | 110340830 | 110343575 | Rat | n/a | Region | gene |
| 1588455 | Thbs1 | thrombospondin 1 | | 3 | 105056293 | 105071445 | Rat | n/a | Region | gene |
| 1590891 | Rpap1 | RNA polymerase II associated protein 1 | | 3 | 106746642 | 106768182 | Rat | n/a | Region | gene |
| 1588496 | Ahcy-ps8 | adenosylhomocysteinase, pseudogene 8 | | 3 | 111306794 | 111307688 | Rat | n/a | Region | gene |
| 1593599 | Tra2b-ps3 | transformer 2 beta, pseudogene 3 | | 3 | 109634622 | 109636026 | Rat | n/a | Region | gene |
| 1595990 | Afg2b | AFG2 AAA ATPase homolog B | | 3 | 109694739 | 109708356 | Rat | n/a | Region | gene |
| 1593370 | Pla2g4f | phospholipase A2, group IVF | | 3 | 107249053 | 107266201 | Rat | n/a | Region | gene |
| 1593372 | Pla2g4d | phospholipase A2 group IVD | | 3 | 107220973 | 107242224 | Rat | n/a | Region | gene |
| 1594601 | Gabarap-ps2 | GABA type A receptor-associated protein, pseudogene 2 | | 3 | 106839998 | 106840386 | Rat | n/a | Region | gene |
| 1593334 | Terb2 | telomere repeat binding bouquet formation protein 2 | | 3 | 109138343 | 109156700 | Rat | n/a | Region | gene |
| 1593338 | Eif3j | eukaryotic translation initiation factor 3, subunit J | | 3 | 108985103 | 109007341 | Rat | n/a | Region | gene |
| 1593345 | Strc | stereocilin | | 3 | 108335920 | 108355114 | Rat | n/a | Region | gene |
| 1593350 | Tgm5 | transglutaminase 5 | | 3 | 108008087 | 108044013 | Rat | n/a | Region | gene |
| 1593360 | Stard9 | StAR-related lipid transfer domain containing 9 | | 3 | 107581097 | 107672746 | Rat | n/a | Region | gene |
| 1596799 | Ncaph | non-SMC condensin I complex, subunit H | | 3 | 114371937 | 114399178 | Rat | n/a | Region | gene |
| 1588368 | Serf2 | small EDRK-rich factor 2 | | 3 | 108426960 | 108430736 | Rat | n/a | Region | gene |
| 1595953 | Ankrd63 | ankyrin repeat domain 63 | | 3 | 105675148 | 105679970 | Rat | n/a | Region | gene |
| 2290039 | Jmjd7 | jumonji domain containing 7 | | 3 | 106998454 | 107004538 | Rat | n/a | Region | gene |
| 2319932 | Wac-ps2 | WW domain containing adaptor with coiled-coil, pseudogene 2 | | 3 | 114996917 | 114998457 | Rat | n/a | Region | gene |
| 2320789 | Rpl32-ps1 | ribosomal protein L32, pseudogene 1 | | 3 | 112494978 | 112495501 | Rat | n/a | Region | gene |
| 2325492 | Mir674 | microRNA 674 | | 3 | 104053133 | 104053209 | Rat | n/a | Region | gene |
| 2325507 | Mir147 | microRNA 147 | | 3 | 109722692 | 109722770 | Rat | n/a | Region | gene |
| 6496122 | Oip5-as1 | OIP5 antisense RNA 1 | | 3 | 106578309 | 106591845 | Rat | n/a | Region | gene |
| 6500748 | LOC100909998 | zinc finger protein 2-like | | 3 | 114793783 | 114818395 | Rat | n/a | Region | gene |
| 7499004 | Phb2-ps2 | prohibitin 2, pseudogene 2 | | 3 | 108841197 | 108843373 | Rat | n/a | Region | gene |
| 7536034 | Rps4x-ps2 | ribosomal protein S4, X-linked, pseudogene 2 | | 3 | 108672163 | 108673023 | Rat | n/a | Region | gene |
| 7536035 | LOC102552950 | uncharacterized LOC102552950 | | 3 | 102223143 | 102232648 | Rat | n/a | Region | gene |
| 7615199 | Tgm7 | transglutaminase 7 | | 3 | 108051890 | 108068116 | Rat | n/a | Region | gene |
| 7572515 | LOC102555822 | uncharacterized LOC102555822 | | 3 | 114910231 | 114924485 | Rat | n/a | Region | gene |
| 7544371 | LOC102555456 | uncharacterized LOC102555456 | | 3 | 102959088 | 102971208 | Rat | n/a | Region | gene |
| 7547984 | LOC102553090 | uncharacterized LOC102553090 | | 3 | 102232706 | 102238710 | Rat | n/a | Region | gene |
| 7562764 | LOC102548045 | uncharacterized LOC102548045 | | 3 | 105704400 | 105714041 | Rat | n/a | Region | gene |
| 7607903 | Tmf1-ps1 | TATA element modulatory factor 1, pseudogene 1 | | 3 | 113022599 | 113027243 | Rat | n/a | Region | gene |
| 7735873 | Snrpf-ps3 | small nuclear ribonucleoprotein polypeptide F, pseudogene 3 | | 3 | 115420800 | 115423872 | Rat | n/a | Region | gene |
| 7751632 | LOC102555576 | uncharacterized LOC102555576 | | 3 | 115424504 | 115507561 | Rat | n/a | Region | gene |
| 7678100 | Cks2-ps1 | CDC28 protein kinase regulatory subunit 2, pseudogene 1 | | 3 | 104998500 | 105012016 | Rat | n/a | Region | gene |
| 7727044 | LOC102556271 | uncharacterized LOC102556271 | | 3 | 114766560 | 114769026 | Rat | n/a | Region | gene |
| 7690189 | LOC102555070 | uncharacterized LOC102555070 | | 3 | 111988107 | 111993983 | Rat | n/a | Region | gene |
| 9076375 | Dll4l1 | delta like canonical Notch ligand 4 like 1 | | 3 | 106311472 | 106317974 | Rat | n/a | Region | gene |
| 9153540 | LOC103691883 | uncharacterized LOC103691883 | | 3 | 114528697 | 114529457 | Rat | n/a | Region | gene |
| 9250626 | Haus2 | HAUS augmin like complex subunit 2 | | 3 | 107553146 | 107565982 | Rat | n/a | Region | gene |
| 9432037 | LOC103691864 | uncharacterized LOC103691864 | | 3 | 102953525 | 102954651 | Rat | n/a | Region | gene |
| 10401149 | Mtln | mitoregulin | | 3 | 115018810 | 115019668 | Rat | n/a | Region | gene |
| 11459092 | LOC108350458 | uncharacterized LOC108350458 | | 3 | 114769516 | 114793766 | Rat | n/a | Region | gene |
| 11361547 | Inafm2 | InaF motif containing 2 | | 3 | 105728208 | 105733766 | Rat | n/a | Region | gene |
| 11450983 | LOC108350455 | uncharacterized LOC108350455 | | 3 | 112271347 | 112275444 | Rat | n/a | Region | gene |
| 11429098 | LOC108350564 | glycine cleavage system H protein, mitochondrial pseudogene | | 3 | 106154314 | 106157906 | Rat | n/a | Region | gene |
| 11407687 | Trnah-gug7 | transfer RNA histidine (anticodon GUG) 7 | | 3 | 109323124 | 109323195 | Rat | n/a | Region | gene |
| 11378802 | Trnas-gcu4 | transfer RNA serine (anticodon GCU) 4 | | 3 | 106029258 | 106029339 | Rat | n/a | Region | gene |
| 11476027 | Trnah-gug9 | transfer RNA histidine (anticodon GUG) 9 | | 3 | 109325246 | 109325317 | Rat | n/a | Region | gene |
| 11496245 | Trnah-gug8 | transfer RNA histidine (anticodon GUG) 8 | | 3 | 109324630 | 109324701 | Rat | n/a | Region | gene |
| 11497432 | LOC108350459 | uncharacterized LOC108350459 | | 3 | 114844866 | 114849140 | Rat | n/a | Region | gene |
| 11518089 | LOC108350445 | uncharacterized LOC108350445 | | 3 | 107380534 | 107408993 | Rat | n/a | Region | gene |
| 11490080 | LOC108350444 | 40S ribosomal protein S20 pseudogene | | 3 | 106636402 | 106639571 | Rat | n/a | Region | gene |
| 41276602 | LOC120101649 | uncharacterized LOC120101649 | | 3 | 112609056 | 112611665 | Rat | n/a | Region | gene |
| 41088749 | LOC120101650 | 40S ribosomal protein S14-like | | 3 | 112838842 | 112839309 | Rat | n/a | Region | gene |
| 41113166 | LOC120101643 | sodium/nucleoside cotransporter 2-like | | 3 | 109505640 | 109535183 | Rat | n/a | Region | gene |
| 41139445 | LOC120101648 | uncharacterized LOC120101648 | | 3 | 111840429 | 111871313 | Rat | n/a | Region | gene |
| 41114726 | LOC120102037 | small nucleolar RNA SNORA48 | | 3 | 106034295 | 106034427 | Rat | n/a | Region | gene |
| 41114814 | Dmdl1 | dystrophin like 1 | | 3 | 110282105 | 110284854 | Rat | n/a | Region | gene |
| 41141334 | LOC120101637 | uncharacterized LOC120101637 | | 3 | 105220427 | 105224274 | Rat | n/a | Region | gene |
| 41206203 | LOC120101948 | U6 spliceosomal RNA | | 3 | 108403290 | 108403396 | Rat | n/a | Region | gene |
| 41284704 | Rnu105c | RNA, U105C small nucleolar | | 3 | 108399872 | 108400075 | Rat | n/a | Region | gene |
| 41172918 | LOC120101644 | sodium/nucleoside cotransporter 2-like | | 3 | 109577556 | 109593992 | Rat | n/a | Region | gene |
| 41209037 | LOC120101638 | uncharacterized LOC120101638 | | 3 | 105479444 | 105487982 | Rat | n/a | Region | gene |
| 41147450 | LOC120101652 | uncharacterized LOC120101652 | | 3 | 112807157 | 112814132 | Rat | n/a | Region | gene |
| 41147582 | LOC120101654 | mitochondrial fission regulator 1-like | | 3 | 114286751 | 114293220 | Rat | n/a | Region | gene |
| 41187367 | Zscan29-ps1 | zinc finger and SCAN domain containing 29, pseudogene 1 | | 3 | 108136468 | 108140431 | Rat | n/a | Region | gene |
| 41364680 | LOC120101972 | U6 spliceosomal RNA | | 3 | 113775940 | 113776054 | Rat | n/a | Region | gene |
| 41193039 | LOC120101914 | uncharacterized LOC120101914 | | 3 | 107696606 | 107714056 | Rat | n/a | Region | gene |
| 41215235 | LOC120101647 | oogenesin-3-like | | 3 | 109926856 | 109927633 | Rat | n/a | Region | gene |
| 41157710 | LOC120093166 | protein-glutamine gamma-glutamyltransferase 5-like | | 3 | 108028742 | 108048946 | Rat | n/a | Region | gene |
| 41290327 | LOC120102010 | small nucleolar RNA SNORA15 | | 3 | 107415211 | 107415319 | Rat | n/a | Region | gene |
| 41348066 | LOC120101636 | uncharacterized LOC120101636 | | 3 | 105049041 | 105052980 | Rat | n/a | Region | gene |
| 41072169 | LOC120102128 | U4 spliceosomal RNA | | 3 | 109433925 | 109434099 | Rat | n/a | Region | gene |
| 41164137 | Rpl7-ps19 | ribosomal protein L7, pseudogene 19 | | 3 | 110312211 | 110312971 | Rat | n/a | Region | gene |
| 41377247 | LOC120101634 | uncharacterized LOC120101634 | | 3 | 104739185 | 104768591 | Rat | n/a | Region | gene |
| 41109379 | H2az2-ps1 | H2A.Z variant histone 2, pseudogene 1 | | 3 | 105553551 | 105557545 | Rat | n/a | Region | gene |
| 41165495 | Akr1b1-ps6 | aldo-keto reductase family 1 member B, pseudogene 6 | | 3 | 105453204 | 105456990 | Rat | n/a | Region | gene |
| 40972321 | LOC120101646 | uncharacterized LOC120101646 | | 3 | 109917153 | 109919854 | Rat | n/a | Region | gene |
| 41013566 | LOC120102028 | small nucleolar RNA SNORA48 | | 3 | 110656354 | 110656498 | Rat | n/a | Region | gene |
| 40927741 | Rnu6-603 | RNA, U6 small nuclear 603 | | 3 | 106276929 | 106277024 | Rat | n/a | Region | gene |
| 40998754 | LOC120102099 | small nucleolar RNA U13 | | 3 | 103775219 | 103775328 | Rat | n/a | Region | gene |
| 41001010 | LOC120102023 | U1 spliceosomal RNA | | 3 | 105017369 | 105017530 | Rat | n/a | Region | gene |
| 40961474 | LOC120101915 | barrier-to-autointegration factor-like | | 3 | 108698917 | 108699164 | Rat | n/a | Region | gene |
| 40992335 | Tk1-ps2 | thymidine kinase 1, pseudogene 2 | | 3 | 109191206 | 109192343 | Rat | n/a | Region | gene |
| 40967222 | LOC120101916 | uncharacterized LOC120101916 | | 3 | 108610335 | 108612905 | Rat | n/a | Region | gene |
| 41079124 | Eno1-ps25 | enolase 1, pseudogene 25 | | 3 | 104028008 | 104029277 | Rat | n/a | Region | gene |
| 41055476 | LOC120102036 | small nucleolar RNA SNORA48 | | 3 | 113905684 | 113905826 | Rat | n/a | Region | gene |
| 41222800 | LOC120101639 | uncharacterized LOC120101639 | | 3 | 105625378 | 105634875 | Rat | n/a | Region | gene |
| 41298797 | LOC120102030 | small nucleolar RNA SNORA48 | | 3 | 103045835 | 103045977 | Rat | n/a | Region | gene |
| 41238482 | LOC120102132 | U6 spliceosomal RNA | | 3 | 105111125 | 105111231 | Rat | n/a | Region | gene |
