Strain Report - Rat Genome Database

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Strain: PVG.1AV1.DA-(D4Mgh17-D4Rat84)/Kiru

Symbol: PVG.1AV1.DA-(D4Mgh17-D4Rat84)/Kiru
Strain: PVG.1AV1.DA-(D4Mgh17-D4Rat84)
Substrain: Kiru
RGD ID: 8551868
Citation ID: RRID:RGD_8551868
Ontology ID: RS:0003687
Also Known As: PVG.1AV1.DA-(D4Mgh17-D4Rat84)/Kiru; PVG.1AV1.C4(DA)S
Type: congenic
Available Source: Not Available
Origination: Department of Medicine, Karolinska Institutet, Stockholm, Sweden
Description: DA/ZtmKini allele is introgressed into the PVG.1AV1/Kini rats.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24114,921,280 - 180,699,135RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.04113,100,978 - 182,171,018RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04177,782,842 - 246,313,537RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.44116,611,031 - 185,398,530RGD_MAPPER_PIPELINERGSC3.4





Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "PVG.1AV1.DA-(D4Mgh17-D4Rat84)/Kiru" (RS:0003687)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:
References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. High resolution mapping of an arthritis susceptibility locus on rat chromosome 4, and characterization of regulated phenotypes. Ribbhammar U, etal., Hum Mol Genet 2003 Sep 1;12(17):2087-96.

Region

Position Markers

Flank 1 / 1 (D4Mgh17)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24114,921,280 - 114,921,417 (+)MAPPER
Rnor_6.04113,247,673 - 113,247,809NCBI
Rnor_6.04113,100,978 - 113,101,114NCBI
Rnor_5.04177,926,531 - 177,926,667UniSTS
Rnor_5.04177,782,842 - 177,782,978UniSTS
RGSC_v3.44116,611,031 - 116,611,168RGD
RGSC_v3.44116,611,032 - 116,611,168UniSTS
RGSC_v3.14116,855,512 - 116,855,649RGD
Celera4103,918,469 - 103,918,605UniSTS
RH 3.4 Map4660.47UniSTS
RH 3.4 Map4660.47RGD
RH 2.0 Map4668.7RGD
Cytogenetic Map4q34UniSTS

Flank 2 / 1 (D4Rat84)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24180,699,020 - 180,699,135 (+)MAPPER
Rnor_6.04182,170,904 - 182,171,018NCBI
Rnor_5.04246,313,423 - 246,313,537UniSTS
RGSC_v3.44185,398,416 - 185,398,530UniSTS
RGSC_v3.44185,398,415 - 185,398,530RGD
RGSC_v3.14185,643,540 - 185,643,654RGD
Celera4169,180,864 - 169,180,990UniSTS
RH 3.4 Map41096.4RGD
RH 3.4 Map41096.4UniSTS
SHRSP x BN Map499.9UniSTS
SHRSP x BN Map499.9RGD
FHH x ACI Map4113.49RGD

Additional Information