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Strain Registration

Strain: DA.F344-(D10Arb27-D10Rat92)/Nsi

Symbol: DA.F344-(D10Arb27-D10Rat92)/Nsi
Strain: DA.F344-(D10Arb27-D10Rat92)
Substrain: Nsi
RGD ID: 7364978
Citation ID: RRID:RRRC_00678
Ontology ID: RS:0003547
Also Known As: DA.F344(Cia5d9); DA.F344-(D10Arb27-D10Rat92)/Nsi
Type: congenic
Available Source: Rat Resource and Research Center
Origination: North Shore-Long Island Jewish Research Institute,350 Community Drive - Manhasset, NY 11030.
Description: Congenic strain created by backcrossing F344 into DA/BklArbNsi 8 times then brother-sister mating to maintain in the homozygous state
Coat Color: agouti
Last Known Status: Cryopreserved Sperm (as of 2019-02-19)
Research Usage arthritis/autoimmunity studies
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21065,927,233 - 74,586,024RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01068,305,037 - 77,269,936RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01067,971,352 - 77,132,664RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41069,160,380 - 78,170,722RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Data registered by the Rat Resource & Research Center Personal Communication with Rat Resource & Research Center
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Arb27)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21065,927,233 - 65,927,370 (+)MAPPER
Rnor_6.01068,305,037 - 68,305,173NCBI
Rnor_5.01067,971,352 - 67,971,488UniSTS
RGSC_v3.41069,160,380 - 69,160,517RGD
RGSC_v3.41069,160,381 - 69,160,517UniSTS
RGSC_v3.11069,174,003 - 69,174,140RGD
Celera1064,883,710 - 64,883,846UniSTS
SHRSP x BN Map1047.6099UniSTS
SHRSP x BN Map1047.6099RGD
FHH x ACI Map1053.73RGD
Cytogenetic Map10q26UniSTS

Flank 2 / 1 (D10Rat92)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21074,585,846 - 74,586,024 (+)MAPPER
Rnor_6.01077,269,759 - 77,269,936NCBI
Rnor_5.01077,132,487 - 77,132,664UniSTS
RGSC_v3.41078,170,545 - 78,170,722UniSTS
RGSC_v3.41078,170,416 - 78,170,722RGD
RGSC_v3.11078,184,915 - 78,185,092RGD
Celera1073,484,939 - 73,485,118UniSTS
RH 3.4 Map10681.2RGD
RH 3.4 Map10681.2UniSTS
SHRSP x BN Map1052.4899UniSTS
SHRSP x BN Map1052.4899RGD
FHH x ACI Map1060.8599RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other F344 alleles between: D10Arb27 and D10Rat92. DA alleles at: D10Nsi85 and D10Rat24. 2292495
Database Acc Id Source(s)
RRRC RRRC:00678 RGD