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Strain Registration

Strain: SS.LEW-(D1Rat42-D1Wox10)/Jr

Symbol: SS.LEW-(D1Rat42-D1Wox10)/Jr
Strain: SS.LEW-(D1Rat42-D1Wox10)
Substrain: Jr
RGD ID: 734483
Citation ID: RRID:RGD_734483
Ontology ID: RS:0000873
Also Known As: Chr1 X 15; SS.LEW-(D1Rat42-D1Wox10)/Jr; SS.LEW-(D1Rat42-D1Rat71)/Jr
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio, USA
Description: This is a congenic substrain derived from SS.LEW-(D1Mco2-D1Mco35)/Jr. A 43 cM fragment of LEW chr 1 was introgressed into SS background.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21133,587,283 - 214,537,671RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01141,381,406 - 236,763,528RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01142,342,107 - 244,066,407RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41135,418,152 - 220,639,653RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Localization of a blood pressure QTL on rat chromosome 1 using dahl rat congenic strains Saad Y, etal., Physiol Genomics 1999 Nov 11;1(3):119-25.
3. Multiple blood pressure QTL on rat chromosome 1 defined by Dahl rat congenic strains. Saad Y, etal., Physiol Genomics 2001 Jan 19;4(3):201-14.

Region

Position Markers

Flank 1 / 1 (D1Rat42)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21133,587,283 - 133,587,443 (+)MAPPER
Rnor_6.01141,381,406 - 141,381,565NCBI
Rnor_5.01142,342,107 - 142,342,266UniSTS
RGSC_v3.41135,418,152 - 135,418,485RGD
RGSC_v3.41135,418,181 - 135,418,340UniSTS
RGSC_v3.11135,496,587 - 135,496,746RGD
Celera1125,650,270 - 125,650,429UniSTS
RH 3.4 Map11060.8UniSTS
RH 3.4 Map11060.8RGD
RH 2.0 Map1704.4RGD
SHRSP x BN Map168.8399RGD
FHH x ACI Map167.73RGD

Flank 2 / 1 (D1Wox10)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21214,537,555 - 214,537,671 (-)MAPPER
Rnor_6.01236,763,415 - 236,763,528NCBI
Rnor_5.01244,066,294 - 244,066,407UniSTS
RGSC_v3.41220,639,539 - 220,639,653RGD
RGSC_v3.41220,639,540 - 220,639,653UniSTS
RGSC_v3.11220,803,562 - 220,803,676RGD
Celera1211,854,688 - 211,854,801UniSTS
RH 2.0 Map11183.9RGD
Cytogenetic Map1q43UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics May have a heart weight QTL which is independent of blood pressure. 61514
strain_life_disease Had no significant blood pressure effect as compared to the SS rats but had a significant increase in body weight and heart weight. 61514