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Strain Registration

Strain: SS.LEW-(D1Mco2-D1Rat49)/Jr

Symbol: SS.LEW-(D1Mco2-D1Rat49)/Jr
Strain: SS.LEW-(D1Mco2-D1Rat49)
Substrain: Jr
RGD ID: 734479
Citation ID: RRID:RGD_734479
Ontology ID: RS:0000863
Also Known As: Chr1 X 3; SS.LEW-(D1Mco2-D1Rat49)/Jr
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio, USA
Description: This is a congenic substrain derived from SS.LEW-(D1Mco2-D1Mco35)/Jr. A 57 cM fragment of LEW chr 1 was introgressed into SS background.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2156,732,484 - 154,464,242RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0157,761,120 - 165,129,939RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0158,687,835 - 171,330,794RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41157,497,884 - 157,498,254RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Localization of a blood pressure QTL on rat chromosome 1 using dahl rat congenic strains Saad Y, etal., Physiol Genomics 1999 Nov 11;1(3):119-25.

Region

Position Markers

Flank 1 / 1 (D1Mco2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2156,732,484 - 56,732,668 (+)MAPPER
Rnor_6.0157,761,120 - 57,761,301NCBI
Rnor_5.0158,687,835 - 58,688,016UniSTS
Celera152,934,777 - 52,934,936UniSTS
Cytogenetic Map1 RGD

Flank 2 / 1 (D1Rat49)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21154,464,069 - 154,464,242 (+)MAPPER
Rnor_6.01165,129,767 - 165,129,939NCBI
Rnor_5.01171,330,622 - 171,330,794UniSTS
RGSC_v3.41157,497,884 - 157,498,254RGD
RGSC_v3.41157,497,945 - 157,498,117UniSTS
RGSC_v3.11157,576,351 - 157,576,523RGD
Celera1152,548,393 - 152,548,555UniSTS
RH 3.4 Map11257.0UniSTS
RH 3.4 Map11257.0RGD
RH 2.0 Map1825.0RGD
SHRSP x BN Map177.8599RGD
FHH x ACI Map170.99RGD

Additional Information