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Strain Registration

Strain: DA.PVG-(D4Rat141-D4Mgh11)

Symbol: DA.PVG-(D4Rat141-D4Mgh11)
Strain: DA.PVG-(D4Rat141-D4Mgh11)
RGD ID: 731193
Citation ID: RRID:RGD_731193
Ontology ID: RS:0000225
Also Known As: DA.PVG-(D4Rat141-D4Mgh11)
Type: congenic
Available Source: Not Available
Origination: Department of Medicine, Karolinska Institutet, Stockholm, Sweden
Description: PVG allele is introgressed into the DA rats. Recombinant strains were derived from these which were used in further studies.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24148,090,542 - 167,139,601RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.04146,942,075 - 168,047,091RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04210,231,569 - 230,565,226RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.44151,158,666 - 171,204,531RGD_MAPPER_PIPELINERGSC3.4





Experimental Data Annotations    Click to see Annotation Detail View

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
DA.PVG-(D4Rat141-D4Mgh11)  IEA 7241799 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
joint integrity trait  EXP 730281 RGD 

Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "DA.PVG-(D4Rat141-D4Mgh11)" (RS:0000225)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:
References

References - curated
# Reference Title Reference Citation
1. Association of arthritis with a gene complex encoding C-type lectin-like receptors. Lorentzen JC, etal., Arthritis Rheum. 2007 Aug;56(8):2620-32.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines
3. High resolution mapping of an arthritis susceptibility locus on rat chromosome 4, and characterization of regulated phenotypes. Ribbhammar U, etal., Hum Mol Genet 2003 Sep 1;12(17):2087-96.

Region

Position Markers

Flank 1 / 1 (D4Rat141)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24148,090,542 - 148,090,731 (+)MAPPER
Rnor_6.04146,942,075 - 146,942,261NCBI
Rnor_5.04210,231,569 - 210,231,755UniSTS
RGSC_v3.44151,158,667 - 151,158,853UniSTS
RGSC_v3.44151,158,666 - 151,158,853RGD
RGSC_v3.14151,403,508 - 151,403,694RGD
Celera4136,985,799 - 136,985,985UniSTS
RH 3.4 Map4952.1RGD
RH 3.4 Map4952.1UniSTS
RH 2.0 Map4935.1RGD
SHRSP x BN Map472.4899RGD
FHH x ACI Map487.92RGD
Cytogenetic Map4q42UniSTS

Flank 2 / 1 (D4Mgh11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24167,139,447 - 167,139,601 (+)MAPPER
Rnor_6.04168,046,938 - 168,047,091NCBI
Rnor_5.04230,565,073 - 230,565,226UniSTS
RGSC_v3.44171,204,377 - 171,204,531RGD
RGSC_v3.44171,204,378 - 171,204,531UniSTS
RGSC_v3.14171,449,313 - 171,449,467RGD
Celera4155,742,437 - 155,742,588UniSTS
RH 3.4 Map41015.5UniSTS
RH 3.4 Map41015.5RGD
RH 2.0 Map41078.1RGD
SHRSP x BN Map487.2499RGD
FHH x ACI Map4107.8999RGD
Cytogenetic Map4 RGD
Strain QTL Data
Symbol Name Trait
Oia7 Oil induced arthritis QTL 7 joint integrity trait   (VT:0010548)    

Additional Information