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Strain Registration

Strain: SS.LEW-(D1Rat211-D1Rat18)/Mco

Symbol: SS.LEW-(D1Rat211-D1Rat18)/Mco
Strain: SS.LEW-(D1Rat211-D1Rat18)
Substrain: Mco
RGD ID: 731190
Citation ID: RRID:RGD_731190
Ontology ID: RS:0000870
Also Known As: S.LEW (D1Mco4X1X3A); SS.LEW-(D1Rat211-D1Rat18)/Mco
Type: congenic
Available Source: Not Available
Origination: Department of Physiology and Molecular Medicine, Medical College of Ohio, Toledo, Ohio
Description: A segment of chr 1 from Lewis which was obtained from Charles was introgressed into Dahl salt-sensitive strain which is an in-house colony.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2131,050,840 - 49,268,520RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0133,667,777 - 49,454,378RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0135,077,728 - 50,297,622RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4171,147,796 - 1,148,037RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.4143,747,374 - 43,747,532RGD_MAPPER_PIPELINERGSC3.4





Experimental Data Annotations    Click to see Annotation Detail View

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
SS.LEW-(D1Rat211-D1Rat18)/Mco  IEA 7241799 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
arterial blood pressure trait  EXP 728381 RGD 

References

References - curated
# Reference Title Reference Citation
1. Substitution mapping of a blood pressure quantitative trait locus to a 2.73 Mb region on rat chromosome 1. Joe B, etal., J Hypertens 2003 Nov;21(11):2077-84.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines
3. Multiple blood pressure QTL on rat chromosome 1 defined by Dahl rat congenic strains. Saad Y, etal., Physiol Genomics 2001 Jan 19;4(3):201-14.

Region

Position Markers

Flank 1 / 1 (D1Rat211)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2131,050,840 - 31,051,081 (+)MAPPER
Rnor_6.0133,667,777 - 33,668,017NCBI
Rnor_5.0135,077,728 - 35,077,968UniSTS
RGSC_v3.4171,147,796 - 1,148,037RGD
RGSC_v3.4171,147,797 - 1,148,037UniSTS
RGSC_v3.1171,147,796 - 1,148,037RGD
Celera129,685,067 - 29,685,307UniSTS
FHH x ACI Map125.71RGD
FHH x ACI Map125.71UniSTS

Flank 2 / 1 (D1Rat18)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2149,268,362 - 49,268,520 (+)MAPPER
Rnor_6.0149,454,221 - 49,454,378NCBI
Rnor_5.0150,297,465 - 50,297,622UniSTS
RGSC_v3.4143,747,375 - 43,747,532UniSTS
RGSC_v3.4143,747,374 - 43,747,532RGD
RGSC_v3.1143,750,320 - 43,750,477RGD
Celera145,054,420 - 45,054,577UniSTS
RH 3.4 Map1575.2RGD
RH 3.4 Map1575.2UniSTS
RH 2.0 Map1291.4RGD
SHRSP x BN Map123.88RGD
Cytogenetic Map1q11UniSTS
Strain QTL Data
Symbol Name Trait
Bp153 Blood pressure QTL 153 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other This congenic strain has a significant effect on blood pressure 728381