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Strain Registration

Strain: SS.BN-(D13Rat77-D13Rat105)/Mcwi

Symbol: SS.BN-(D13Rat77-D13Rat105)/Mcwi
Strain: SS.BN-(D13Rat77-D13Rat105)
Substrain: Mcwi
RGD ID: 6907438
Citation ID: RRID:RGD_6907438
Ontology ID: RS:0003365
Also Known As: SS.BN-(D13Rat77-D13Rat105)/Mcwi; Ren1-SSA strain
Type: congenic
Available Source: Not Available
Origination: Medical College of Wisconsin, Milwaukee, Wisconsin
Description: These were generated by crossing SS/JrHsdMcwi with SS-Chr 13BN/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21344,139,595 - 60,933,518RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01349,478,067 - 66,075,827RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01354,552,997 - 71,047,437RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41345,592,985 - 63,175,600RGD_MAPPER_PIPELINERGSC3.4





Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "SS.BN-(D13Rat77-D13Rat105)/Mcwi" (RS:0003365)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Impaired relaxation of cerebral arteries in the absence of elevated salt intake in normotensive congenic rats carrying the Dahl salt-sensitive renin gene. Durand MJ, etal., Am J Physiol Heart Circ Physiol. 2010 Dec;299(6):H1865-74. Epub 2010 Sep 17.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D13Rat77)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21360,933,298 - 60,933,518 (+)MAPPER
Rnor_6.01366,075,608 - 66,075,827NCBI
Rnor_5.01371,047,218 - 71,047,437UniSTS
RGSC_v3.41363,175,274 - 63,175,600RGD
RGSC_v3.41363,175,311 - 63,175,530UniSTS
RGSC_v3.11363,189,391 - 63,189,610RGD
Celera1360,931,410 - 60,931,629UniSTS
RH 3.4 Map13282.8UniSTS
RH 3.4 Map13282.8RGD
RH 2.0 Map13421.2RGD
SHRSP x BN Map1322.6498RGD
FHH x ACI Map1322.65RGD

Flank 2 / 1 (D13Rat105)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21344,139,595 - 44,139,796 (+)MAPPER
Rnor_6.01349,478,067 - 49,478,267NCBI
Rnor_5.01354,552,997 - 54,553,197UniSTS
RGSC_v3.41345,592,985 - 45,593,186RGD
RGSC_v3.41345,592,986 - 45,593,186UniSTS
RGSC_v3.11345,607,028 - 45,607,229RGD
Celera1344,473,240 - 44,473,440UniSTS
FHH x ACI Map1318.27RGD
FHH x ACI Map1318.27UniSTS
Cytogenetic Map13q13UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics This congenic has a 23.5 Mbp fragment of BN chr 13 that contains the SS renin allele 6903245
strain_characteristics This congenic has a 3.5 Mbp fragment of BN chr 13 that contains the SS renin allele 6903245