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Strain Registration

Strain: SS.SHR-(D9Mco72-D9Uia4)/Mco

Symbol: SS.SHR-(D9Mco72-D9Uia4)/Mco
Strain: SS.SHR-(D9Mco72-D9Uia4)
Substrain: Mco
RGD ID: 6903920
Citation ID: RRID:RGD_6903920
Ontology ID: RS:0003335
Also Known As: SS.SHR-(D9Mco72-D9Uia4)/Mco; S.SHR(9)x8Ax9
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio
Description: This is a congenic substrain developed by crossing SS.SHR-(D9Mco72-D9Mco93)/Mco to SS/Jr to get F2 which were again crossed with SS/Jr to duplicate the recombinant region
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2947,902,208 - 62,072,556RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0952,686,874 - 67,451,944RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0952,352,690 - 67,265,755RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4944,842,118 - 59,247,627RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Refined mapping of blood pressure quantitative trait loci using congenic strains developed from two genetically hypertensive rat models. Kumarasamy S, etal., Hypertens Res. 2011 Dec;34(12):1263-70. doi: 10.1038/hr.2011.116. Epub 2011 Aug 4.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D9Mco72)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2947,902,208 - 47,902,417 (+)MAPPER
Rnor_6.0952,686,874 - 52,687,080NCBI
Rnor_5.0952,352,690 - 52,352,896UniSTS
RGSC_v3.4944,842,118 - 44,842,324UniSTS
Celera945,571,224 - 45,571,428UniSTS
Cytogenetic Map9 RGD

Flank 2 / 1 (D9Uia4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2962,072,275 - 62,072,556 (+)MAPPER
Rnor_6.0967,451,664 - 67,451,944NCBI
Rnor_5.0967,265,475 - 67,265,755UniSTS
RGSC_v3.4959,247,346 - 59,247,627RGD
RGSC_v3.4959,247,347 - 59,247,627UniSTS
RGSC_v3.1959,394,328 - 59,394,609RGD
Celera959,496,451 - 59,496,731UniSTS
Cytogenetic Map9 RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-28 SS.SHR-(D9Mco72-D9Uia4)/Mco    SS.SHR-(D9Mco72-D9Uia4)/Mco    Name updated 68913 APPROVED
2013-08-28 SS.SHR-(D9Mco72-D9Uia4)/Mco    SS.SHR-(D9Mco72-D9Uia4)/Mco    Name updated 68913 APPROVED