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Strain Registration

Strain: SS-Cd247em3Mcwi

Symbol: SS-Cd247em3Mcwi
Strain: SS-Cd247em3
Substrain: Mcwi
RGD ID: 6484564
Citation ID: RRID:RGD_6484564
Ontology ID: RS:0003258
Alleles: Cd247em3Mcwi
Also Known As: SS-Cd247em3Mcwi; SS-Cd247^[em3Mcwi]
Type: mutant
Available Source: Not Available
Origination: PhysGen Knockouts
Description: This strain was produced by injecting ZFNs targeting the sequence CTCGCCTGCATCCTTCAAGtgcagtTCCCAGGAGCAGGTAAGG into SS/JrHsdMcwi rat embryos. The resulting mutation is a 13-bp frameshift deletion in exon 1.
Last Known Status: Cryopreserved Sperm (as of 2021-11-03)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21378,043,302 - 78,118,437RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01383,996,234 - 83,996,246RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01388,876,046 - 88,951,003RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41381,515,383 - 81,594,699RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. PhysGen Knockouts PhysGen Knockout strains
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Cd247em3Mcwi-var1 chr13 83996234 83996246 TCAAGTGCAGTTC - deletion Rnor_6.0

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-31 SS-Cd247em3Mcwi    SS-Cd247em3Mcwi    Symbol updated 68687 APPROVED
2014-03-31 SS-Cd247em3Mcwi    SS-Cd247em3Mcwi    Symbol updated 68687 APPROVED
2014-03-31 SS-Cd247em3Mcwi    SS-Cd247em3Mcwi    Name updated 68913 APPROVED
2014-03-31 SS-Cd247em3Mcwi    SS-Cd247em3Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Cd247em3Mcwi    SS-Cd247em3Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Cd247em3Mcwi    SS-Cd247em3Mcwi    Name updated 68913 APPROVED