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Strain Registration

Strain: SS.LEW-(D1Rat39-D1Rat131)/Jr

Symbol: SS.LEW-(D1Rat39-D1Rat131)/Jr
Strain: SS.LEW-(D1Rat39-D1Rat131)
Substrain: Jr
RGD ID: 631610
Citation ID: RRID:RGD_631610
Ontology ID: RS:0000872
Also Known As: SS.LEW-(D1Rat39-D1Rat131); SS.LEW-(D1Rat39-D1Rat131)/Jr
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio, USA
Description: Segment of chr 1 from Lewis which is an in-house colony was introgressed into Dahl salt-sensitive strain which was obtained from Charles River.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21124,668,437 - 142,990,467RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01132,134,307 - 152,871,103RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01133,172,202 - 159,182,239RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41125,983,422 - 145,648,920RGD_MAPPER_PIPELINERGSC3.4





Experimental Data Annotations    Click to see Annotation Detail View

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
SS.LEW-(D1Rat39-D1Rat131)/Jr  IEA 7241799 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
arterial blood pressure trait  EXP 68885 RGD 


References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Multiple blood pressure QTL on rat chromosome 1 defined by Dahl rat congenic strains. Saad Y, etal., Physiol Genomics 2001 Jan 19;4(3):201-14.

Region

Position Markers

Flank 1 / 1 (D1Rat39)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21124,668,437 - 124,668,572 (+)MAPPER
Rnor_6.01132,134,307 - 132,134,441NCBI
Rnor_5.01133,172,202 - 133,172,336UniSTS
RGSC_v3.41125,983,422 - 125,983,558RGD
RGSC_v3.41125,983,423 - 125,983,557UniSTS
RGSC_v3.11126,061,765 - 126,061,901RGD
Celera1116,826,236 - 116,826,370UniSTS
RH 3.4 Map1975.9UniSTS
RH 3.4 Map1975.9RGD
RH 2.0 Map1663.9RGD

Flank 2 / 1 (D1Rat131)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21142,990,289 - 142,990,467 (+)MAPPER
Rnor_6.01152,870,926 - 152,871,103NCBI
Rnor_5.01159,182,062 - 159,182,239UniSTS
RGSC_v3.41145,648,742 - 145,648,920RGD
RGSC_v3.41145,648,743 - 145,648,920UniSTS
RGSC_v3.11145,727,149 - 145,727,326RGD
Celera1141,251,340 - 141,251,517UniSTS
RH 3.4 Map11116.0UniSTS
RH 3.4 Map11116.0RGD
RH 2.0 Map1728.9RGD
SHRSP x BN Map174.4799RGD
FHH x ACI Map167.73RGD
Strain QTL Data
Symbol Name Trait
Bp94 Blood pressure QTL 94 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics Blood pressure is significantly reduced as compared to the SS rats 68885