Strain Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Strain Registration

Strain: ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi

Symbol: ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi
Strain: ACI.FHH-(D1Hmgc1-D1Hmgc19)
Substrain: Mcwi
RGD ID: 5529529
Citation ID: RRID:RGD_5529529
Ontology ID: RS:0003037
Also Known As: ACI.FHH-(D1Hmgc18-D1Hmgc19)/Mcwi; ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi
Type: congenic
Available Source: Not Available
Origination: Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, Wisconsin
Description: desired segments from FHH/EurMcwi were introgressed in ACI/Eur background
Last Known Status: Cryopreserved Sperm
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21243,559,115 - 249,583,894RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01264,446,896 - 270,462,479RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01271,889,649 - 277,901,651RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41249,745,626 - 249,745,784RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Data registered by Dr. Howard Jacob's group Personal communication between Dr. Howard Jacob's group and the RGD curators.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D1Hmgc1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21243,559,115 - 243,559,273 (+)MAPPER
Rnor_6.01264,446,896 - 264,447,053NCBI
Rnor_5.01271,889,649 - 271,889,806UniSTS
RGSC_v3.41249,745,626 - 249,745,784RGD
RGSC_v3.41249,745,627 - 249,745,784UniSTS
Celera1239,370,656 - 239,370,813UniSTS
RH 3.4 Map11615.9RGD
RH 3.4 Map11615.9UniSTS

Flank 2 / 1 (D1Hmgc19)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21249,583,745 - 249,583,894 (+)MAPPER
Rnor_6.01270,462,331 - 270,462,479NCBI
Rnor_5.01277,901,503 - 277,901,651UniSTS
Celera1245,322,849 - 245,322,997UniSTS
Cytogenetic Map1q55UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-08-15 ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi    ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi    Name updated 68913 APPROVED
2013-08-15 ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi    ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi    Name updated 68913 APPROVED
2013-06-25 ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi    ACI.FHH-(D1Hmgc18-D1Hmgc19)/Mcwi    Name updated 68913 APPROVED
2013-06-25 ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi    ACI.FHH-(D1Hmgc18-D1Hmgc19)/Mcwi    Name updated 68913 APPROVED
2013-06-25 ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi    ACI.FHH-(D1Hmgc18-D1Hmgc19)/Mcwi    Symbol updated 68687 APPROVED
2013-06-25 ACI.FHH-(D1Hmgc1-D1Hmgc19)/Mcwi    ACI.FHH-(D1Hmgc18-D1Hmgc19)/Mcwi    Symbol updated 68687 APPROVED