Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: SBH.SBN-(D1Mgh2-D1Rat101)/Ygl

Symbol: SBH.SBN-(D1Mgh2-D1Rat101)/Ygl
Strain: SBH.SBN-(D1Mgh2-D1Rat101)
Substrain: Ygl
RGD ID: 2314500
Citation ID: RRID:RGD_2314500
Ontology ID: RS:0002110
Also Known As: SBH.SBN-(D1Mgh2-D1Rat101)Ygl;SBH/y.SBN/y-(D1Mgh2-D1Rat101);YSBH/y;YSBH/y;Line 1; SBH.SBN-(D1Mgh2-D1Rat101)/Ygl
Type: congenic
Available Source: Not Available
Origination: Ben Gurion University Barzilai Medical Center, Ashkelon, Israel
Description: Segment of interest from chr 1 of SBN/Ygl was introgressed onto the genetic background of SBH/Ygl this was done by crossing female SBH/Ygl with male SBN/Ygl fixing the Y chr to SBN/Ygl
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2122,340,647 - 97,146,439RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0123,406,428 - 102,658,898RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0124,875,821 - 103,735,908RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4122,842,898 - 97,175,101RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
systolic blood pressure

References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Congenic strains confirm the presence of salt-sensitivity QTLs on chromosome 1 in the Sabra rat model of hypertension. Yagil C, etal., Physiol Genomics 2003 Jan 15;12(2):85-95.

Region

Position Markers

Flank 1 / 1 (D1Mgh2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2122,340,647 - 22,340,797 (+)MAPPER
Rnor_6.0123,406,428 - 23,406,577NCBI
Rnor_5.0124,875,821 - 24,875,970UniSTS
RGSC_v3.4122,842,898 - 22,843,363RGD
RGSC_v3.4122,842,962 - 22,843,111UniSTS
RGSC_v3.1122,845,906 - 22,846,056RGD
Celera121,070,514 - 21,070,663UniSTS
RH 3.4 Map1220.6UniSTS
RH 3.4 Map1220.6RGD
RH 2.0 Map1147.3RGD
SHRSP x BN Map115.98RGD
FHH x ACI Map119.52RGD
Cytogenetic Map1p12UniSTS

Flank 2 / 1 (D1Rat101)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2197,146,283 - 97,146,439 (+)MAPPER
Rnor_6.01102,658,741 - 102,658,898NCBI
Rnor_5.01103,735,751 - 103,735,908UniSTS
RGSC_v3.4197,174,943 - 97,175,101RGD
RGSC_v3.4197,174,944 - 97,175,101UniSTS
RGSC_v3.1197,253,055 - 97,253,212RGD
Celera191,393,642 - 91,393,799UniSTS
RH 3.4 Map1909.1RGD
RH 3.4 Map1909.1UniSTS
RH 2.0 Map1609.2RGD
FHH x ACI Map151.1299RGD
Cytogenetic Map1q22UniSTS

Additional Information