Strain Report - Rat Genome Database

Name: SHR.WKY-( D1Mgh2-D1Wox10 )/IzmTkyo
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Strain Registration

General

Strain: SHR.WKY-(D1Mgh2-D1Wox10)/IzmTkyo

Symbol:

SHR.WKY-(D1Mgh2-D1Wox10)/IzmTkyo

Strain:

SHR.WKY-(D1Mgh2-D1Wox10)

Substrain:

IzmTkyo

RGD ID:

2314243

Citation ID:

RRID:RGD_2314243

Ontology ID:

RS:0002168

Also Known As:

SHR.WKY-(D1Mgh2-D1Wox10)/IzmTkyo; NBRP Rat No: 0546;1SWC

Type:

congenic

Available Source:

National BioResource Project for the Rat in Japan

Origination:

National BioResource Project for the Rat in Japan

Description:

Developed by the depositor

Coat Color:

Albino

Inbred Generations:

F12

Last Known Status:

Cryopreserved Embryo; Cryopreserved Sperm

Research Usage

Cardio Hypertension

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	22,340,647 - 214,537,671	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	1	23,406,428 - 236,763,528	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	1	24,875,821 - 244,066,407	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	1	22,842,898 - 220,639,653	RGD_MAPPER_PIPELINE	RGSC3.4

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Strains registered by the National Bio Resource Project for the Rat in Japan	Personal Communication with NBRP
2.	RGD Strain RSO annotation pipeline	RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D1Mgh2)

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	1	22,340,647 - 22,340,797 (+)	MAPPER
Rnor_6.0	1	23,406,428 - 23,406,577	NCBI
Rnor_5.0	1	24,875,821 - 24,875,970	UniSTS
RGSC_v3.4	1	22,842,898 - 22,843,363	RGD
RGSC_v3.4	1	22,842,962 - 22,843,111	UniSTS
RGSC_v3.1	1	22,845,906 - 22,846,056	RGD
Celera	1	21,070,514 - 21,070,663	UniSTS
RH 3.4 Map	1	220.6	UniSTS
RH 3.4 Map	1	220.6	RGD
RH 2.0 Map	1	147.3	RGD
SHRSP x BN Map	1	15.98	RGD
FHH x ACI Map	1	19.52	RGD
Cytogenetic Map	1	p12	UniSTS

Flank 2 / 1 (D1Wox10)

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	1	214,537,555 - 214,537,671 (-)	MAPPER
Rnor_6.0	1	236,763,415 - 236,763,528	NCBI
Rnor_5.0	1	244,066,294 - 244,066,407	UniSTS
RGSC_v3.4	1	220,639,539 - 220,639,653	RGD
RGSC_v3.4	1	220,639,540 - 220,639,653	UniSTS
RGSC_v3.1	1	220,803,562 - 220,803,676	RGD
Celera	1	211,854,688 - 211,854,801	UniSTS
RH 2.0 Map	1	1183.9	RGD
Cytogenetic Map	1	q43	UniSTS

Additional Information

RGD Curation Notes

Note Type	Note	Reference
strain_reproduction	Maintained in homozygous condition. Sib mating.	1302502

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-05-29	SHR.WKY-(D1Mgh2-D1Wox10)/IzmTkyo		SHR.WKY-(D1Mgh2-D1Wox10)/IzmTkyo		Name updated	68913	APPROVED
2012-05-29	SHR.WKY-(D1Mgh2-D1Wox10)/IzmTkyo		SHR.WKY-(D1Mgh2-D1Wox10)/IzmTkyo		Name updated	68913	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: SHR.WKY-(D1Mgh2-D1Wox10)/IzmTkyo