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Strain Registration

Strain: BUF.ACI-(D15Rat68-D15Rat29)/Ncc

Symbol: BUF.ACI-(D15Rat68-D15Rat29)/Ncc
Strain: BUF.ACI-(D15Rat68-D15Rat29)
Substrain: Ncc
RGD ID: 2304019
Citation ID: RRID:RGD_2304019
Ontology ID: RS:0001807
Also Known As: BUF.ACI-(D15Rat68-D15Rat29)/Ncc; BUF.ACI-Gcs1/Ncc; BUF.ACI-Gcs1/Ncc;NBRP Rat No: 0098; BUF.ACI-(D15Rat68-D15Rat29)/Ncc
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: National BioResource Project for the Rat in Japan
Description: This congenic strain in the BUF background that had homozygous ACI chr 15 was developed by speed congenic method.
Coat Color: Albino
Inbred Generations: F10
Last Known Status: Cryopreserved Embryo; Cryopreserved Sperm
Research Usage Cancer
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21556,484,420 - 56,484,560RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01563,498,932 - 63,499,071RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01567,139,660 - 67,139,799RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41562,521,452 - 108,387,411RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines
3. Chromosomal mapping of genes controlling development, histological grade, depth of invasion, and size of rat stomach carcinomas. Ushijima T, etal., Cancer Res 2000 Feb 15;60(4):1092-6.

Region

Position Markers

Flank 1 / 1 (D15Rat68)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21556,484,420 - 56,484,560 (+)MAPPER
Rnor_6.01563,498,932 - 63,499,071NCBI
Rnor_5.01567,139,660 - 67,139,799UniSTS
RGSC_v3.41562,521,452 - 62,521,592RGD
RGSC_v3.41562,521,453 - 62,521,592UniSTS
RGSC_v3.11562,537,233 - 62,537,372RGD
Celera1556,046,905 - 56,047,044UniSTS
RH 3.4 Map15424.0UniSTS
RH 3.4 Map15424.0RGD
RH 2.0 Map15358.3RGD
SHRSP x BN Map1539.1498RGD
FHH x ACI Map1547.47RGD

Flank 2 / 1 (D15Rat29)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.415108,387,243 - 108,387,411UniSTS
RGSC_v3.415108,387,242 - 108,387,411RGD
RGSC_v3.115108,403,023 - 108,403,191RGD
Celera1599,127,682 - 99,127,850UniSTS
RH 3.4 Map15766.2RGD
RH 3.4 Map15766.2UniSTS
RH 2.0 Map15653.9RGD
SHRSP x BN Map1566.5198RGD
FHH x ACI Map1574.04RGD
Cytogenetic Map4q34UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Good breeding performance. 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-09 BUF.ACI-(D15Rat68-D15Rat29)/Ncc    BUF.ACI-(D15Rat68-D15Rat29)/Ncc    Name updated 68913 APPROVED
2012-05-09 BUF.ACI-(D15Rat68-D15Rat29)/Ncc    BUF.ACI-(D15Rat68-D15Rat29)/Ncc    Name updated 68913 APPROVED