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Strain Registration

Strain: SS.BN-(D13Rat20-D13Got22)/Mcwi

Symbol: SS.BN-(D13Rat20-D13Got22)/Mcwi
Strain: SS.BN-(D13Rat20-D13Got22)
Substrain: Mcwi
RGD ID: 2293146
Citation ID: RRID:RGD_2293146
Ontology ID: RS:0001488
Also Known As: SS.BN-(D13Rat20-D13Got22)/Mcwi;SS.BN-(D13rat20-D13Got22)/Mcwi;line C; congenic line 6; congenic strain 6; SS.BN-(D13Rat115-D13Rat88)/Mcwi;SS.BN-(D13Rat115-D13Rat88)/Mcwi; congenic line 5-4; SS.BN-(D13Rat20-D13Got22)/Mcwi
Type: congenic
Available Source: Not Available
Origination: Medical College of Wisconsin, Milwaukee, Wisconsin
Description: SS/JrHsdMcwi were crossed with SS-13BN/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21337,262,092 - 37,262,232RGD_MAPPER_PIPELINEmRatBN7.2
mRatBN7.2593,541,170 - 93,542,503RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01342,155,543 - 49,720,682RGD_MAPPER_PIPELINERnor6.0
Rnor_6.0596,601,805 - 96,603,137RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01347,267,053 - 54,791,605RGD_MAPPER_PIPELINERnor5.0
Rnor_5.05100,631,702 - 100,633,034RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41338,329,089 - 45,828,716RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.4597,701,780 - 97,703,112RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Congenic strains reveal the effect of the renin gene on skeletal muscle angiogenesis induced by electrical stimulation. de Resende MM, etal., Physiol Genomics. 2008 Jan 15;.
2. Narrowing a region on rat chromosome 13 that protects against hypertension in Dahl SS-13BN congenic strains. Moreno C, etal., Am J Physiol Heart Circ Physiol. 2011 Apr;300(4):H1530-5. doi: 10.1152/ajpheart.01026.2010. Epub 2011 Jan 21.
3. Multiple Blood Pressure loci on rat Chromosome 13 attenuate the development of hypertension in the Dahl S Hypertensive rat. Moreno C, etal., Physiol Genomics. 2007 Jun 12;.
4. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D13Rat20)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21337,262,092 - 37,262,232 (+)MAPPER
Rnor_6.01342,155,543 - 42,155,682NCBI
Rnor_5.01347,267,053 - 47,267,192UniSTS
RGSC_v3.41338,329,089 - 38,329,229RGD
RGSC_v3.41338,329,090 - 38,329,229UniSTS
RGSC_v3.11338,343,132 - 38,343,272RGD
Celera1337,065,270 - 37,065,412UniSTS
RH 2.0 Map13292.2RGD
SHRSP x BN Map138.0099RGD
FHH x ACI Map139.15RGD
Cytogenetic Map13q11UniSTS

Flank 2 / 1 (D13Got22)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2593,541,170 - 93,542,503 (+)MAPPER
Rnor_6.01349,720,575 - 49,720,682NCBI
Rnor_6.0596,601,805 - 96,603,137NCBI
Rnor_5.05100,631,702 - 100,633,034UniSTS
Rnor_5.01354,791,498 - 54,791,605UniSTS
RGSC_v3.4597,701,780 - 97,703,112UniSTS
RGSC_v3.41345,828,608 - 45,828,716RGD
RGSC_v3.41345,828,609 - 45,828,716UniSTS
RGSC_v3.11345,842,652 - 45,842,759RGD
Celera1344,707,006 - 44,707,111UniSTS
Celera592,175,218 - 92,176,550UniSTS
RH 3.4 Map13114.1RGD
RH 3.4 Map13114.1UniSTS
RH 2.0 Map13398.3RGD
Cytogenetic Map13q13UniSTS
Strain QTL Data
Symbol Name Trait
Bp401 Blood pressure QTL 401 arterial blood pressure trait   (VT:2000000)    

Additional Information