Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: SS-Birc3m2Mcwi

Symbol: SS-Birc3m2Mcwi
Strain: SS-Birc3m2
Substrain: Mcwi
RGD ID: 1642269
Citation ID: RRID:RGD_1642269
Ontology ID: RS:0001461
Alleles: Birc3m2Mcwi
Also Known As: SS-Birc3m2Mcwi; SS-Birc3^[m2Mcwi]
Type: mutant
Available Source: Not Available
Origination: PhysGen
Description: Male founders are injected with ENU (N-ethyl-N-nitrosourea) and harem bred to females. The pups are genetically screened using the TILLING assay (an enzyme-based heteroduplex cleavage assay) as well as nucleotide sequencing to identify and characterize target genes possessing ENU-induced mutations. K170E mutation is generated from the codon change AAG/GAG.
Last Known Status: Extinct (as of 2017-01-26)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.285,000,844 - 5,028,470RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.086,048,590 - 6,076,828RGD_MAPPER_PIPELINERnor6.0
Rnor_5.086,047,454 - 6,075,236RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.484,682,202 - 4,696,856RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. PhysGen Strains PhysGen strains
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region


Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-21 SS-Birc3m2Mcwi    SS-Birc3m2Mcwi    Symbol updated 68687 APPROVED
2014-03-21 SS-Birc3m2Mcwi    SS-Birc3m2Mcwi    Name updated 68913 APPROVED
2014-03-21 SS-Birc3m2Mcwi    SS-Birc3m2Mcwi    Symbol updated 68687 APPROVED
2014-03-21 SS-Birc3m2Mcwi    SS-Birc3m2Mcwi    Name updated 68913 APPROVED