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Strain Registration

Strain: SS.LEW-(D10Rat204-D10Rat9)/Ayd

Symbol: SS.LEW-(D10Rat204-D10Rat9)/Ayd
Strain: SS.LEW-(D10Rat204-D10Rat9)
Substrain: Ayd
RGD ID: 1579894
Citation ID: RRID:RGD_1579894
Ontology ID: RS:0001532
Also Known As: C10S.L23;SS.LEW-(D10Rat204-D10Rat9)/Ayd; SS.LEW-(D10Rat204-D10Rat9)/Ayd
Type: congenic
Available Source: Not Available
Origination: Research Centre, Centre Hospitalier de l'Universite de Montreal (CHUM), Montreal, Quebec, Canada
Description: A sub congenic strain derived from the progenitor strain SS.LEW-(D10Rat119-D10Mgh1)/Ayd.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21090,404,397 - 90,404,618RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01093,662,786 - 93,663,006RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01093,421,499 - 93,421,719RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41094,837,236 - 99,588,446RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mean arterial blood pressure

References

References - curated
# Reference Title Reference Citation
1. Epistasis, not numbers, regulates functions of clustered Dahl rat quantitative trait loci applicable to human hypertension. Charron S, etal., Hypertension. 2005 Dec;46(6):1300-8. Epub 2005 Nov 14.
2. Submegabase resolution of epistatically interacting quantitative trait loci for blood pressure applicable for essential hypertension. Chauvet C, etal., J Hypertens. 2008 May;26(5):893-901.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Rat204)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21090,404,397 - 90,404,618 (+)MAPPER
Rnor_6.01093,662,786 - 93,663,006NCBI
Rnor_5.01093,421,499 - 93,421,719UniSTS
RGSC_v3.41094,837,236 - 94,837,457RGD
RGSC_v3.41094,837,237 - 94,837,457UniSTS
RGSC_v3.11094,851,606 - 94,851,827RGD
Celera1089,087,887 - 89,088,101UniSTS
SHRSP x BN Map1069.01RGD
SHRSP x BN Map1069.01UniSTS
Cytogenetic Map10q32.1UniSTS

Flank 2 / 1 (D10Rat9)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.41099,588,306 - 99,588,446RGD
RGSC_v3.41099,588,307 - 99,588,446UniSTS
RGSC_v3.11099,602,676 - 99,602,816RGD
Celera1093,755,287 - 93,755,428UniSTS
RH 3.4 Map101071.59UniSTS
RH 3.4 Map101071.59RGD
RH 2.0 Map101181.2RGD
SHRSP x BN Map1077.15RGD
Cytogenetic Map10q32.1UniSTS
Strain QTL Data
Symbol Name Trait
Bp280 Blood pressure QTL 280 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem Strain showed mean arterial pressure of 146 mmHg which was decreased from parental SS strain and increased from progenitor congenic strain SS.LEW-(D10Rat119-D10Mgh1)/Ayd. 1559293