Strain: SS.SR-(rs66001705-D5Mgh16)/Opaz |
Symbol: |
SS.SR-(rs66001705-D5Mgh16)/Opaz |
Strain: |
SS.SR-(rs66001705-D5Mgh16) |
Substrain: |
Opaz |
RGD ID: |
12790964 |
Citation ID: |
RRID:RRRC_00614 |
Ontology ID: |
RS:0004367
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Also Known As: |
S.R5C; SS.SR-(rs66001705-D5Mgh16)/Opaz |
Type: |
congenic |
Available Source: |
Rat Resource and Research Center |
Origination: |
Boston University School of Medicine, Boston, Massachusetts |
Description: |
Congenic strain which was generated using the speed congenic strategy by backcrossing SS/JrHsd and SR/JrHsd parental strains. The SR chromosome 5 region from rs66001705 to D5Mgh16 was introgressed on the genetic background of SS. |
Last Known Status: |
Cryopreserved Sperm (as of 2017-02-22) |
Position |
Rat Assembly | Chr | Position (strand) | Source | JBrowse |
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mRatBN7.2 | 5 | 161,317,276 - 161,317,411 | RGD_MAPPER_PIPELINE | mRatBN7.2 | Rnor_6.0 | 5 | 155,945,375 - 167,946,134 | RGD_MAPPER_PIPELINE | Rnor6.0 | Rnor_5.0 | 5 | 159,701,342 - 171,522,762 | RGD_MAPPER_PIPELINE | Rnor5.0 | RGSC_v3.4 | 5 | 156,360,938 - 168,006,088 | RGD_MAPPER_PIPELINE | RGSC3.4 |
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References
Region
Position Markers
Flank 1 / 1 (rs66001705) |
Rat Assembly | Chr | Position (strand) | Source |
---|
Rnor_6.0 | 5 | 155,945,375 - 155,945,375 | RGD | Rnor_5.0 | 5 | 159,701,342 - 159,701,342 | RGD | RGSC_v3.4 | 5 | 156,360,938 - 156,360,938 | RGD |
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Flank 2 / 1 (D5Mgh16) |
Rat Assembly | Chr | Position (strand) | Source |
---|
mRatBN7.2 | 5 | 161,317,276 - 161,317,411 (+) | MAPPER | Rnor_6.0 | 5 | 167,946,000 - 167,946,134 | NCBI | Rnor_5.0 | 5 | 171,522,628 - 171,522,762 | UniSTS | RGSC_v3.4 | 5 | 168,005,953 - 168,006,088 | RGD | RGSC_v3.4 | 5 | 168,005,954 - 168,006,088 | UniSTS | RGSC_v3.1 | 5 | 168,016,142 - 168,016,276 | RGD | Celera | 5 | 159,570,955 - 159,571,089 | UniSTS | RH 3.4 Map | 5 | 1126.1 | UniSTS | RH 3.4 Map | 5 | 1126.1 | RGD | RH 2.0 Map | 5 | 1109.7 | RGD |
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Additional Information
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