Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: WKY-Sik2em5Mcwi

Symbol: WKY-Sik2em5Mcwi
Strain: WKY-Sik2em5
Substrain: Mcwi
RGD ID: 12790944
Citation ID: RRID:RGD_12790944
Ontology ID: RS:0004358
Alleles: Sik2em5Mcwi
Also Known As: WKY-Sik2em5Mcwi; WKY-Sik2^[em5Mcwi]
Type: mutant
Available Source: Contact MCW rat distribution at mcwcustomrats@mcw.edu
Origination: MCW Gene Editing Rat Resource Center
Description: CRISPR/Cas9 system was used to introduce a mutation in the Sik2 gene of WKY/NCrl rat embryos. The resulting mutation is a 5-bp deletion in exon 4 of the Sik2 gene.
Last Known Status: Cryopreserved Sperm (as of 2021-11-03)
Genotyping Protocol Download Genotyping Protocol
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2851,262,007 - 51,262,012RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0855,309,005 - 55,408,608RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0853,905,730 - 54,005,295RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4854,240,307 - 54,337,976RGD_MAPPER_PIPELINERGSC3.4






References

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Sik2em5Mcwi-var1 chr8 51262007 51262012 GCTGTG T delins mRatBN7.2

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-02-22 WKY-Sik2em5Mcwi    WKY-Sik2em5Mcwi (COPY)    Symbol updated 68687 APPROVED
2017-02-22 WKY-Sik2em5Mcwi    WKY-Sik2em5Mcwi (COPY)    Symbol updated 68687 APPROVED