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Strain Registration

Strain: DA.AS2-(Tesb-RT1-DMb)

Symbol: DA.AS2-(Tesb-RT1-DMb)
Strain: DA.AS2-(Tesb-RT1-DMb)
RGD ID: 12743650
Citation ID: RRID:RGD_12743650
Ontology ID: RS:0004328
Also Known As: RRC:00714; DA.1FR61; DA.AS2-(Tesb-RT1-DMb)
Type: congenic
Available Source: Rat Resource and Research Center
Origination: Rat Resource and Research Center
Description: DA.F-(Tesb-RT1-DMb) (DA.1FR61) contains a ~0.4 Mb (min- max 0.25 - 0.53 Mb) insert from DA.1F (RGD:2307301). The insert spans 12-19 genes in the MHC-II/MHC-III regions, including RT1-B and RT1-D. The 12 genes in the MHC-II region have been sequenced and sequences are available from GenBank.
Last Known Status: Cryopreserved Sperm (as of 2017-02-14)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2204,410,002 - 4,700,340RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0203,945,383 - 4,235,947RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0206,258,025 - 7,295,355RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4204,532,358 - 4,836,772RGD_MAPPER_PIPELINERGSC3.4






References

Region

Position Markers

Flank 1 / 1 (Tsbp1)
Rat AssemblyChrPosition (strand)Source
GRCr8204,411,926 - 4,469,214 (-)NCBI
mRatBN7.2204,410,002 - 4,467,284 (-)NCBI
mRatBN7.2 Ensembl204,410,004 - 4,457,053 (-)Ensembl
UTH_Rnor_SHR_Utx205,170,226 - 5,219,942 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.0204,531,964 - 4,581,678 (-)NCBI
UTH_Rnor_WKY_Bbb_1.0205,005,225 - 5,052,249 (-)NCBI
Rnor_6.0204,178,655 - 4,235,947 (+)NCBI
Rnor_6.0 Ensembl204,178,686 - 4,235,950 (+)Ensembl
Rnor_5.0206,258,025 - 6,315,303 (+)NCBI
RGSC_v3.4204,532,358 - 4,579,409 (-)NCBI
Celera206,012,617 - 6,059,663 (-)NCBI
Cytogenetic Map20p12NCBI

Flank 2 / 1 (RT1-DMb)
Rat AssemblyChrPosition (strand)Source
GRCr8204,695,009 - 4,702,560 (-)NCBI
mRatBN7.2204,693,102 - 4,700,340 (-)NCBI
mRatBN7.2 Ensembl204,693,103 - 4,700,340 (-)Ensembl
UTH_Rnor_SHR_Utx205,445,432 - 5,452,711 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.0204,807,175 - 4,814,454 (-)NCBI
UTH_Rnor_WKY_Bbb_1.0205,288,598 - 5,295,865 (-)NCBI
Rnor_6.0203,945,383 - 3,952,838 (+)NCBI
Rnor_6.0 Ensembl205,227,045 - 5,234,290 (-)Ensembl
Rnor_6.0 Ensembl203,945,601 - 3,952,846 (+)Ensembl
Rnor_5.0207,288,114 - 7,295,355 (-)NCBI
RGSC_v3.4204,829,535 - 4,836,772 (-)NCBI
RGSC_v3.1204,829,762 - 4,836,902 (-)NCBI
Celera206,293,763 - 6,301,000 (-)NCBI
Cytogenetic Map20p12NCBI

Additional Information