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Strain Registration

Strain: W-Tg(RNB1-116K03-EGFP-mRFP)104Kyo

Symbol: W-Tg(RNB1-116K03-EGFP-mRFP)104Kyo
Strain: W-Tg(RNB1-116K03-EGFP-mRFP)104
Substrain: Kyo
RGD ID: 11040579
Citation ID: RRID:RGD_11040579
Ontology ID: RS:0004113
Also Known As: NBRP Rat No: 0611
Type: transgenic
Available Source: National BioResource Project for the Rat in Japan
Origination: National BioResource Project for the Rat in Japan
Description: The transgene consists of the bacterial artificial chromosome (BAC) clone RNB1-116, which contains the attractin (Atrn) gene which is modified by in-frame insertion of the EGFP reporter gene upstream of the 29th exon and an in-frame insertion of the mRFP reporter gene between 24th exon and stop codon.
Coat Color: albino
Inbred Generations: N5
Last Known Status: Cryopreserved Sperm
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.23118,110,320 - 118,244,326RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.03123,434,409 - 123,567,922RGD_MAPPER_PIPELINERnor6.0
Rnor_5.03129,934,303 - 130,067,267RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.43118,539,268 - 118,701,177RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (Atrn)
Rat AssemblyChrPosition (strand)Source
GRCr83138,563,271 - 138,697,360 (+)NCBI
mRatBN7.23118,110,320 - 118,244,326 (+)NCBI
mRatBN7.2 Ensembl3118,110,229 - 118,244,322 (+)Ensembl
UTH_Rnor_SHR_Utx3122,004,507 - 122,138,654 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.03130,602,558 - 130,736,641 (+)NCBI
UTH_Rnor_WKY_Bbb_1.03128,260,615 - 128,394,765 (+)NCBI
Rnor_6.03123,434,409 - 123,567,922 (+)NCBI
Rnor_6.0 Ensembl3123,434,409 - 123,567,918 (+)Ensembl
Rnor_5.03129,934,303 - 130,067,267 (+)NCBI
RGSC_v3.43118,539,268 - 118,701,177 (+)NCBI
RGSC_v3.13118,444,840 - 118,606,746 (+)NCBI
Celera3116,920,666 - 117,054,199 (+)NCBI
Cytogenetic Map3q36NCBI

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other In this transgenic rat, it is expected that the membrane form of attractin is co-expressesed with EGFP (green fluorescent protein) as recombinant protein and the secreted form of attractin expresses mRFP1 (red fluorescent protein) recombinant protein. 1302502
strain_reproduction Maintained by crossing of Tg hemizygous and F344/NSlc 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-23 W-Tg(RNB1-116K03-EGFP-mRFP)104Kyo    W-Tg(RNB1-116K03-EGFP,-mRFP)104Kyo    Symbol updated 68687 APPROVED
2016-03-23 W-Tg(RNB1-116K03-EGFP-mRFP)104Kyo    W-Tg(RNB1-116K03-EGFP,-mRFP)104Kyo    Name updated 68913 APPROVED
2016-03-23 W-Tg(RNB1-116K03-EGFP-mRFP)104Kyo    W-Tg(RNB1-116K03-EGFP,-mRFP)104Kyo    Symbol updated 68687 APPROVED
2016-03-23 W-Tg(RNB1-116K03-EGFP-mRFP)104Kyo    W-Tg(RNB1-116K03-EGFP,-mRFP)104Kyo    Name updated 68913 APPROVED