BW400_H QTL Report (Homo sapiens) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
QTL Registration

QTL: BW400_H (Body weight QTL 400 (human)) Homo sapiens

Symbol: BW400_H
Name: Body weight QTL 400 (human)
RGD ID: 2289439
Previously known as: Body weight QTL 5 (human); BW5_H
Trait: Body weight
Measurement Type: BMI
LOD Score: 1.77
P Value: 0.0021
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376156,997,951 - 171,115,067RGD_MAPPER_PIPELINEGRCh37
Build 366156,739,933 - 170,899,992RGDNCBI36
Cross Type: Not Available
Population Stats: Not Available



Disease Annotations     Click to see Annotation Detail View
obesity  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. A genomewide linkage scan for quantitative-trait loci for obesity phenotypes. Deng HW, etal., Am J Hum Genet 2002 May;70(5):1138-51. Epub 2002 Mar 28.
2. A follow-up linkage study for quantitative trait loci contributing to obesity-related phenotypes. Liu YJ, etal., J Clin Endocrinol Metab 2004 Feb;89(2):875-82.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D6S281)
Human AssemblyChrPosition (strand)Source
GRCh376169,997,898 - 169,998,059UniSTS
GRCh376169,997,844 - 169,998,052UniSTS
GRCh376169,997,957 - 169,998,059UniSTS
Build 366169,739,882 - 169,739,984RGD
Celera6170,708,141 - 170,708,300UniSTS
Celera6170,708,200 - 170,708,300RGD
Celera6170,708,087 - 170,708,293UniSTS
Cytogenetic Map6q27UniSTS
HuRef6167,419,922 - 167,420,022UniSTS
HuRef6167,419,863 - 167,420,022UniSTS
HuRef6167,419,809 - 167,420,015UniSTS
Marshfield Genetic Map6190.14RGD
Genethon Genetic Map6201.1UniSTS
TNG Radiation Hybrid Map685013.0UniSTS
deCODE Assembly Map6188.38UniSTS
Stanford-G3 RH Map66741.0UniSTS
GeneMap99-GB4 RH Map6648.15UniSTS
Whitehead-RH Map6851.7UniSTS
Whitehead-YAC Contig Map6 UniSTS
NCBI RH Map61674.5UniSTS
GeneMap99-G3 RH Map67044.0UniSTS


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_statistics_details software used; SOLAR two-point linkage