SCL129_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: SCL129_H (Serum cholesterol level QTL 129 (human)) Homo sapiens

Symbol: SCL129_H
Name: Serum cholesterol level QTL 129 (human)
RGD ID: 1578600
Trait: Lipid level
Measurement Type: LDL cholesterol
LOD Score: 2.2
P Value: Not Available
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh376147,967,069 - 171,115,067RGD_MAPPER_PIPELINEGRCh37
Build 366148,008,762 - 170,899,992RGDNCBI36
Cross Type: Not Available
Population Stats: 507 Caucasian families with at least two obese siblings



Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. Genetic determinants of obesity-related lipid traits. Sonnenberg GE, etal., J Lipid Res. 2004 Apr;45(4):610-5. Epub 2004 Feb 1.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Flank 1: (G15833)
Human AssemblyChrPosition (strand)Source
GRCh376147,967,069 - 147,967,262UniSTS
Build 366148,008,762 - 148,008,955RGD
Celera6148,707,543 - 148,707,736RGD
HuRef6145,530,336 - 145,530,505UniSTS
Marshfield Genetic Map6146.06RGD
Marshfield Genetic Map6146.06UniSTS
Flank 2: (D6S2436)
Human AssemblyChrPosition (strand)Source
Cytogenetic Map6q24.1UniSTS
Marshfield Genetic Map6154.64UniSTS
Marshfield Genetic Map6154.64RGD
deCODE Assembly Map6161.27UniSTS


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_population 507 Caucasian families with at least two obese siblings 1559420
qtl_population_details 2,209 Caucasian individuals from 507 families having at least two obese siblings (BMI > 30) were recruited through TOPS (Taking Off Pounds Sensibly) membership in 10 US midwestern states 1559420
qtl_statistics_details SOLAR; variance components linkage analysis; covariates of the triglyceride linkage included waist circumference, fasting insulin, and insulin:glucose, but not body mass index or hip circumference 1559420